RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
LMNB1-201ENST00000261366 C10orf95Q9H7T3 257 aa8.24□□□□□ -1.09
LMNB1-201ENST00000261366 P0C880 135 aa8.24□□□□□ -1.09
LMNB1-201ENST00000261366 RPL37P61927 97 aaKnown RBP8.24□□□□□ -1.09
LMNB1-201ENST00000261366 MYCBP2O75592 4640 aa8.22□□□□□ -1.09
LMNB1-201ENST00000261366 RYR3Q15413 4870 aa8.22□□□□□ -1.09
LMNB1-201ENST00000261366 KRTAP10-6P60371 365 aaPredicted RBP8.22□□□□□ -1.09
LMNB1-201ENST00000261366 LRP1Q07954 4544 aaKnown RBP8.21□□□□□ -1.09
LMNB1-201ENST00000261366 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
LMNB1-201ENST00000261366 PKHD1L1Q86WI1 4243 aa8.19□□□□□ -1.1
LMNB1-201ENST00000261366 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
LMNB1-201ENST00000261366 TPRXLQ17RH7 258 aa8.18□□□□□ -1.1
LMNB1-201ENST00000261366 KRTAP10-8P60410 259 aa8.16□□□□□ -1.1
LMNB1-201ENST00000261366 HSPG2P98160 4391 aa8.16□□□□□ -1.1
LMNB1-201ENST00000261366 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
LMNB1-201ENST00000261366 S4R3F8 94 aa8.1□□□□□ -1.11
LMNB1-201ENST00000261366 Q5VSD8 79 aa8.08□□□□□ -1.12
LMNB1-201ENST00000261366 TNXBP22105 4242 aa8.06□□□□□ -1.12
LMNB1-201ENST00000261366 KRTAP12-2P59991 146 aa8.04□□□□□ -1.12
LMNB1-201ENST00000261366 FAT3Q8TDW7 4589 aa8.04□□□□□ -1.12
LMNB1-201ENST00000261366 KRTAP17-1Q9BYP8 105 aa8.03□□□□□ -1.12
LMNB1-201ENST00000261366 KIAA1109Q2LD37 5005 aa8.03□□□□□ -1.12
LMNB1-201ENST00000261366 RYR1P21817 5038 aa8.02□□□□□ -1.13
LMNB1-201ENST00000261366 XP32Q5T750 250 aa7.98□□□□□ -1.13
LMNB1-201ENST00000261366 NDUFAF8A1L188 74 aa7.96□□□□□ -1.13
LMNB1-201ENST00000261366 LPAP08519 4548 aa7.95□□□□□ -1.14
LMNB1-201ENST00000261366 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
LMNB1-201ENST00000261366 KRTAP12-1P59990 96 aa7.89□□□□□ -1.15
LMNB1-201ENST00000261366 KRTAP15-1Q3LI76 137 aa7.84□□□□□ -1.15
LMNB1-201ENST00000261366 LRP2P98164 4655 aa7.8□□□□□ -1.16
LMNB1-201ENST00000261366 MT1HL1P0DM35 61 aa7.8□□□□□ -1.16
LMNB1-201ENST00000261366 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
LMNB1-201ENST00000261366 M0QZ58 72 aa7.69□□□□□ -1.18
LMNB1-201ENST00000261366 ABCA13Q86UQ4 5058 aa7.68□□□□□ -1.18
LMNB1-201ENST00000261366 R4GN34 69 aa7.61□□□□□ -1.19
LMNB1-201ENST00000261366 LORP23490 312 aaPredicted RBP7.53□□□□□ -1.2
LMNB1-201ENST00000261366 HERC2O95714 4834 aa7.47□□□□□ -1.21
LMNB1-201ENST00000261366 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
LMNB1-201ENST00000261366 J3QL48 77 aa7.41□□□□□ -1.22
LMNB1-201ENST00000261366 CAMK2N1Q7Z7J9 78 aa7.31□□□□□ -1.24
LMNB1-201ENST00000261366 MUC2Q02817 5179 aa7.28□□□□□ -1.24
LMNB1-201ENST00000261366 SEC61BP60468 96 aaKnown RBP7.27□□□□□ -1.25
LMNB1-201ENST00000261366 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
LMNB1-201ENST00000261366 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
LMNB1-201ENST00000261366 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
LMNB1-201ENST00000261366 HERC1Q15751 4861 aa7.2□□□□□ -1.26
LMNB1-201ENST00000261366 LUZP6Q538Z0 58 aa7.19□□□□□ -1.26
LMNB1-201ENST00000261366 PCLOQ9Y6V0 5065 aa7.14□□□□□ -1.27
LMNB1-201ENST00000261366 PP632Q6XCG6 107 aa7.06□□□□□ -1.28
LMNB1-201ENST00000261366 A0A0A0MQY5 61 aa7.02□□□□□ -1.29
LMNB1-201ENST00000261366 KRTAP19-2Q3LHN2 52 aa7.01□□□□□ -1.29
LMNB1-201ENST00000261366 HMCN2Q8NDA2 5059 aa7□□□□□ -1.29
LMNB1-201ENST00000261366 TNP1P09430 55 aa6.94□□□□□ -1.3
LMNB1-201ENST00000261366 FAT4Q6V0I7 4981 aa6.9□□□□□ -1.3
LMNB1-201ENST00000261366 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
LMNB1-201ENST00000261366 RNF213Q63HN8 5207 aa6.84□□□□□ -1.31
LMNB1-201ENST00000261366 UBR4Q5T4S7 5183 aa6.8□□□□□ -1.32
LMNB1-201ENST00000261366 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
LMNB1-201ENST00000261366 SPRR5A0A1B0GTR4 108 aa6.67□□□□□ -1.34
LMNB1-201ENST00000261366 M0R2T5 61 aa6.64□□□□□ -1.35
LMNB1-201ENST00000261366 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
LMNB1-201ENST00000261366 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
LMNB1-201ENST00000261366 KRTAP19-1Q8IUB9 90 aa6.56□□□□□ -1.36
LMNB1-201ENST00000261366 MT1HP80294 61 aa6.55□□□□□ -1.36
LMNB1-201ENST00000261366 SPRR2GQ9BYE4 73 aa6.5□□□□□ -1.37
LMNB1-201ENST00000261366 KRTAP10-10P60014 251 aa6.45□□□□□ -1.38
LMNB1-201ENST00000261366 MT1FP04733 61 aa6.4□□□□□ -1.38
LMNB1-201ENST00000261366 MT2AP02795 61 aa6.39□□□□□ -1.39
LMNB1-201ENST00000261366 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
LMNB1-201ENST00000261366 KRTAP8-1Q8IUC2 63 aa6.27□□□□□ -1.41
LMNB1-201ENST00000261366 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
LMNB1-201ENST00000261366 PRO2289Q9P1D8 64 aa6.23□□□□□ -1.41
LMNB1-201ENST00000261366 KRTAP10-5P60370 271 aa6.22□□□□□ -1.41
LMNB1-201ENST00000261366 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
LMNB1-201ENST00000261366 MT1XP80297 61 aa6.2□□□□□ -1.42
LMNB1-201ENST00000261366 MT1BP07438 61 aa6.16□□□□□ -1.42
LMNB1-201ENST00000261366 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
LMNB1-201ENST00000261366 KRTAP19-8Q3LI54 63 aa6.13□□□□□ -1.43
LMNB1-201ENST00000261366 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
LMNB1-201ENST00000261366 INE1O15225 51 aa6.09□□□□□ -1.43
LMNB1-201ENST00000261366 KMT2DO14686 5537 aa6.08□□□□□ -1.44
LMNB1-201ENST00000261366 USH2AO75445 5202 aa6.03□□□□□ -1.44
LMNB1-201ENST00000261366 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
LMNB1-201ENST00000261366 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
LMNB1-201ENST00000261366 LCE2BO14633 110 aa5.92□□□□□ -1.46
LMNB1-201ENST00000261366 LCE3CQ5T5A8 94 aa5.85□□□□□ -1.47
LMNB1-201ENST00000261366 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
LMNB1-201ENST00000261366 KRTAP4-8Q9BYQ9 185 aa5.81□□□□□ -1.48
LMNB1-201ENST00000261366 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
LMNB1-201ENST00000261366 KRTAP4-7Q9BYR0 210 aa5.74□□□□□ -1.49
LMNB1-201ENST00000261366 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
LMNB1-201ENST00000261366 SSPOA2VEC9 5147 aa5.54□□□□□ -1.52
LMNB1-201ENST00000261366 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
LMNB1-201ENST00000261366 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
LMNB1-201ENST00000261366 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
LMNB1-201ENST00000261366 KRTAP2-1Q9BYU5 128 aa5.47□□□□□ -1.53
LMNB1-201ENST00000261366 MT1LQ93083 61 aa5.37□□□□□ -1.55
LMNB1-201ENST00000261366 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
LMNB1-201ENST00000261366 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
LMNB1-201ENST00000261366 MT1EP04732 61 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms