RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 KLKP1Q107X0 134 aa8.25□□□□□ -1.09
SNRPA1-201ENST00000254193 SCGB1A1P11684 91 aa8.23□□□□□ -1.09
SNRPA1-201ENST00000254193 K7ERU9 68 aa8.19□□□□□ -1.1
SNRPA1-201ENST00000254193 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
SNRPA1-201ENST00000254193 A8MUN3 132 aa8.16□□□□□ -1.1
SNRPA1-201ENST00000254193 H3BPC8 53 aa8.15□□□□□ -1.1
SNRPA1-201ENST00000254193 KRTAP19-6Q3LI70 58 aa8.15□□□□□ -1.1
SNRPA1-201ENST00000254193 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
SNRPA1-201ENST00000254193 FCGBPQ9Y6R7 5405 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-201ENST00000254193 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
SNRPA1-201ENST00000254193 NDUFC1O43677 76 aa8.14□□□□□ -1.11
SNRPA1-201ENST00000254193 SPRR2GQ9BYE4 73 aa8.08□□□□□ -1.12
SNRPA1-201ENST00000254193 TRAV7A0A075B6U4 112 aa8.01□□□□□ -1.13
SNRPA1-201ENST00000254193 MT1BP07438 61 aa8.01□□□□□ -1.13
SNRPA1-201ENST00000254193 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
SNRPA1-201ENST00000254193 DMAC1Q96GE9 116 aa8.01□□□□□ -1.13
SNRPA1-201ENST00000254193 H0YAA0 97 aa8□□□□□ -1.13
SNRPA1-201ENST00000254193 Q5VV11 94 aa8□□□□□ -1.13
SNRPA1-201ENST00000254193 SMIM20Q8N5G0 67 aa8□□□□□ -1.13
SNRPA1-201ENST00000254193 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
SNRPA1-201ENST00000254193 CRIPTQ9P021 101 aa7.98□□□□□ -1.13
SNRPA1-201ENST00000254193 ADM2Q7Z4H4 148 aa7.97□□□□□ -1.13
SNRPA1-201ENST00000254193 KRTAP4-8Q9BYQ9 185 aa7.97□□□□□ -1.13
SNRPA1-201ENST00000254193 H3BS24 57 aa7.87□□□□□ -1.15
SNRPA1-201ENST00000254193 SNURFQ9Y675 71 aa7.87□□□□□ -1.15
SNRPA1-201ENST00000254193 A6NN06 94 aa7.85□□□□□ -1.15
SNRPA1-201ENST00000254193 ACYP2P14621 99 aa7.83□□□□□ -1.16
SNRPA1-201ENST00000254193 P0C880 135 aa7.82□□□□□ -1.16
SNRPA1-201ENST00000254193 SERP2Q8N6R1 65 aa7.8□□□□□ -1.16
SNRPA1-201ENST00000254193 C20orf197Q8N268 126 aa7.79□□□□□ -1.16
SNRPA1-201ENST00000254193 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
SNRPA1-201ENST00000254193 KRTAP10-5P60370 271 aa7.78□□□□□ -1.16
SNRPA1-201ENST00000254193 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
SNRPA1-201ENST00000254193 R4GN34 69 aa7.73□□□□□ -1.17
SNRPA1-201ENST00000254193 CHKB-CPT1BH3BT56 60 aa7.7□□□□□ -1.18
SNRPA1-201ENST00000254193 SPTSSBQ8NFR3 76 aa7.7□□□□□ -1.18
SNRPA1-201ENST00000254193 M0QZ58 72 aa7.69□□□□□ -1.18
SNRPA1-201ENST00000254193 SPANXA2-OT1Q8N9U9 137 aa7.69□□□□□ -1.18
SNRPA1-201ENST00000254193 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
SNRPA1-201ENST00000254193 KRTAP6-3Q3LI67 103 aa7.65□□□□□ -1.18
SNRPA1-201ENST00000254193 PLAC4Q8WY50 150 aa7.62□□□□□ -1.19
SNRPA1-201ENST00000254193 LINC01554Q52M75 96 aa7.6□□□□□ -1.19
SNRPA1-201ENST00000254193 COX7CP15954 63 aa7.59□□□□□ -1.19
SNRPA1-201ENST00000254193 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
SNRPA1-201ENST00000254193 MT1XP80297 61 aa7.55□□□□□ -1.2
SNRPA1-201ENST00000254193 PRO2289Q9P1D8 64 aa7.53□□□□□ -1.2
SNRPA1-201ENST00000254193 COA5Q86WW8 74 aa7.5□□□□□ -1.21
SNRPA1-201ENST00000254193 CYSTM1Q9H1C7 97 aa7.49□□□□□ -1.21
SNRPA1-201ENST00000254193 H7BZZ5 65 aa7.45□□□□□ -1.22
SNRPA1-201ENST00000254193 KRTAP9-9Q9BYP9 154 aa7.43□□□□□ -1.22
SNRPA1-201ENST00000254193 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
SNRPA1-201ENST00000254193 ANAPC13Q9BS18 74 aa7.41□□□□□ -1.22
SNRPA1-201ENST00000254193 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
SNRPA1-201ENST00000254193 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
SNRPA1-201ENST00000254193 KRTAP5-9P26371 169 aa7.35□□□□□ -1.23
SNRPA1-201ENST00000254193 KRTAP12-2P59991 146 aa7.3□□□□□ -1.24
SNRPA1-201ENST00000254193 SEC61GP60059 68 aa7.29□□□□□ -1.24
SNRPA1-201ENST00000254193 CCDC179H3BU77 68 aa7.28□□□□□ -1.24
SNRPA1-201ENST00000254193 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
SNRPA1-201ENST00000254193 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
SNRPA1-201ENST00000254193 MUC12Q9UKN1 5478 aa7.24□□□□□ -1.25
SNRPA1-201ENST00000254193 KMT2DO14686 5537 aa7.23□□□□□ -1.25
SNRPA1-201ENST00000254193 NEBP20929 6669 aa7.22□□□□□ -1.25
SNRPA1-201ENST00000254193 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
SNRPA1-201ENST00000254193 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
SNRPA1-201ENST00000254193 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
SNRPA1-201ENST00000254193 A0A0D9SG42 100 aa7.18□□□□□ -1.26
SNRPA1-201ENST00000254193 A0A1B0GU33 70 aa7.18□□□□□ -1.26
SNRPA1-201ENST00000254193 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
SNRPA1-201ENST00000254193 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
SNRPA1-201ENST00000254193 KRTAP10-12P60413 245 aa7.15□□□□□ -1.26
SNRPA1-201ENST00000254193 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
SNRPA1-201ENST00000254193 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
SNRPA1-201ENST00000254193 A0A1B0GU69 56 aa7.1□□□□□ -1.27
SNRPA1-201ENST00000254193 ATP5EP56381 51 aaPredicted RBP7.08□□□□□ -1.28
SNRPA1-201ENST00000254193 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
SNRPA1-201ENST00000254193 SPRR2EP22531 72 aa7.05□□□□□ -1.28
SNRPA1-201ENST00000254193 SPRR2BP35325 72 aa7.05□□□□□ -1.28
SNRPA1-201ENST00000254193 SPRR2AP35326 72 aa7.05□□□□□ -1.28
SNRPA1-201ENST00000254193 SPINT4Q6UDR6 99 aa7.04□□□□□ -1.28
SNRPA1-201ENST00000254193 KRTAP20-1Q3LI63 56 aa7.02□□□□□ -1.29
SNRPA1-201ENST00000254193 KRTAP12-1P59990 96 aa7□□□□□ -1.29
SNRPA1-201ENST00000254193 LCE1AQ5T7P2 110 aa6.99□□□□□ -1.29
SNRPA1-201ENST00000254193 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
SNRPA1-201ENST00000254193 TMEM258P61165 79 aa6.97□□□□□ -1.29
SNRPA1-201ENST00000254193 SMIM26A0A096LP01 95 aa6.95□□□□□ -1.3
SNRPA1-201ENST00000254193 A8MU10 97 aa6.95□□□□□ -1.3
SNRPA1-201ENST00000254193 PRR15LQ9BU68 103 aa6.91□□□□□ -1.3
SNRPA1-201ENST00000254193 LINC01558Q9Y6Z2 57 aa6.9□□□□□ -1.3
SNRPA1-201ENST00000254193 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
SNRPA1-201ENST00000254193 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
SNRPA1-201ENST00000254193 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
SNRPA1-201ENST00000254193 SPRR2DP22532 72 aa6.81□□□□□ -1.32
SNRPA1-201ENST00000254193 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
SNRPA1-201ENST00000254193 KRTAP19-7Q3SYF9 63 aa6.74□□□□□ -1.33
SNRPA1-201ENST00000254193 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
SNRPA1-201ENST00000254193 UQCR11O14957 56 aa6.69□□□□□ -1.34
SNRPA1-201ENST00000254193 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
SNRPA1-201ENST00000254193 MT1EP04732 61 aa6.68□□□□□ -1.34
SNRPA1-201ENST00000254193 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms