RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 A0A1B0GU33 70 aa11.3□□□□□ -0.6
SH2D3A-201ENST00000245908 H1FX-AS1Q4G0G2 97 aa11.28□□□□□ -0.6
SH2D3A-201ENST00000245908 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
SH2D3A-201ENST00000245908 HSPG2P98160 4391 aa11.26□□□□□ -0.61
SH2D3A-201ENST00000245908 XP32Q5T750 250 aa11.19□□□□□ -0.62
SH2D3A-201ENST00000245908 RYR1P21817 5038 aa11.15□□□□□ -0.63
SH2D3A-201ENST00000245908 K7ERS5 55 aa11.12□□□□□ -0.63
SH2D3A-201ENST00000245908 KRTAP17-1Q9BYP8 105 aa11.11□□□□□ -0.63
SH2D3A-201ENST00000245908 KRTAP3-3Q9BYR6 98 aa11.1□□□□□ -0.63
SH2D3A-201ENST00000245908 DMBT1Q9UGM3 2413 aaPredicted RBP11.06□□□□□ -0.64
SH2D3A-201ENST00000245908 MT1HL1P0DM35 61 aa11.05□□□□□ -0.64
SH2D3A-201ENST00000245908 RYR3Q15413 4870 aa11.04□□□□□ -0.64
SH2D3A-201ENST00000245908 S4R3F8 94 aa11□□□□□ -0.65
SH2D3A-201ENST00000245908 KRTAP10-6P60371 365 aaPredicted RBP10.99□□□□□ -0.65
SH2D3A-201ENST00000245908 CRIPTQ9P021 101 aa10.98□□□□□ -0.65
SH2D3A-201ENST00000245908 P0C880 135 aa10.97□□□□□ -0.65
SH2D3A-201ENST00000245908 MYCBP2O75592 4640 aa10.97□□□□□ -0.65
SH2D3A-201ENST00000245908 KRTAP3-2Q9BYR7 98 aa10.93□□□□□ -0.66
SH2D3A-201ENST00000245908 KIAA1109Q2LD37 5005 aa10.88□□□□□ -0.67
SH2D3A-201ENST00000245908 KRTAP13-4Q3LI77 160 aa10.85□□□□□ -0.67
SH2D3A-201ENST00000245908 TPRXLQ17RH7 258 aa10.82□□□□□ -0.68
SH2D3A-201ENST00000245908 SPINT4Q6UDR6 99 aa10.72□□□□□ -0.69
SH2D3A-201ENST00000245908 A0A0D9SG42 100 aa10.71□□□□□ -0.69
SH2D3A-201ENST00000245908 LRP2P98164 4655 aa10.67□□□□□ -0.7
SH2D3A-201ENST00000245908 LPAP08519 4548 aa10.67□□□□□ -0.7
SH2D3A-201ENST00000245908 EPPK1P58107 5090 aaKnown RBP10.62□□□□□ -0.71
SH2D3A-201ENST00000245908 KRTAP15-1Q3LI76 137 aa10.59□□□□□ -0.71
SH2D3A-201ENST00000245908 C10orf95Q9H7T3 257 aa10.54□□□□□ -0.72
SH2D3A-201ENST00000245908 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
SH2D3A-201ENST00000245908 KRTAP12-2P59991 146 aa10.49□□□□□ -0.73
SH2D3A-201ENST00000245908 NDUFAF8A1L188 74 aa10.48□□□□□ -0.73
SH2D3A-201ENST00000245908 ABCA13Q86UQ4 5058 aa10.47□□□□□ -0.73
SH2D3A-201ENST00000245908 M0QZ58 72 aa10.46□□□□□ -0.74
SH2D3A-201ENST00000245908 KRTAP12-1P59990 96 aa10.44□□□□□ -0.74
SH2D3A-201ENST00000245908 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
SH2D3A-201ENST00000245908 MUC17Q685J3 4493 aa10.3□□□□□ -0.76
SH2D3A-201ENST00000245908 KRTAP4-1Q9BYQ7 146 aa10.24□□□□□ -0.77
SH2D3A-201ENST00000245908 J3QL48 77 aa10.21□□□□□ -0.77
SH2D3A-201ENST00000245908 R4GN34 69 aa10.18□□□□□ -0.78
SH2D3A-201ENST00000245908 KRTAP19-2Q3LHN2 52 aa10.1□□□□□ -0.79
SH2D3A-201ENST00000245908 HERC2O95714 4834 aa10.07□□□□□ -0.8
SH2D3A-201ENST00000245908 LORP23490 312 aaPredicted RBP10.07□□□□□ -0.8
SH2D3A-201ENST00000245908 BIRC6Q9NR09 4857 aa9.84□□□□□ -0.83
SH2D3A-201ENST00000245908 PLAC4Q8WY50 150 aa9.82□□□□□ -0.84
SH2D3A-201ENST00000245908 FLGP20930 4061 aaPredicted RBP9.8□□□□□ -0.84
SH2D3A-201ENST00000245908 A0A0A0MQY5 61 aa9.69□□□□□ -0.86
SH2D3A-201ENST00000245908 LUZP6Q538Z0 58 aa9.67□□□□□ -0.86
SH2D3A-201ENST00000245908 MUC2Q02817 5179 aa9.66□□□□□ -0.86
SH2D3A-201ENST00000245908 CAMK2N1Q7Z7J9 78 aa9.64□□□□□ -0.87
SH2D3A-201ENST00000245908 HERC1Q15751 4861 aa9.58□□□□□ -0.88
SH2D3A-201ENST00000245908 HMCN2Q8NDA2 5059 aa9.56□□□□□ -0.88
SH2D3A-201ENST00000245908 PP632Q6XCG6 107 aa9.56□□□□□ -0.88
SH2D3A-201ENST00000245908 LCE2CQ5TA81 110 aa9.49□□□□□ -0.89
SH2D3A-201ENST00000245908 PCLOQ9Y6V0 5065 aa9.48□□□□□ -0.89
SH2D3A-201ENST00000245908 SPRR2GQ9BYE4 73 aa9.31□□□□□ -0.92
SH2D3A-201ENST00000245908 TNP1P09430 55 aa9.31□□□□□ -0.92
SH2D3A-201ENST00000245908 KRTAP23-1A1A580 65 aa9.25□□□□□ -0.93
SH2D3A-201ENST00000245908 KRTAP19-1Q8IUB9 90 aa9.25□□□□□ -0.93
SH2D3A-201ENST00000245908 MT1HP80294 61 aa9.23□□□□□ -0.93
SH2D3A-201ENST00000245908 FAT4Q6V0I7 4981 aa9.23□□□□□ -0.93
SH2D3A-201ENST00000245908 M0R2T5 61 aa9.2□□□□□ -0.94
SH2D3A-201ENST00000245908 SPRR5A0A1B0GTR4 108 aa9.14□□□□□ -0.95
SH2D3A-201ENST00000245908 RNF213Q63HN8 5207 aa9.12□□□□□ -0.95
SH2D3A-201ENST00000245908 MT2AP02795 61 aa9.08□□□□□ -0.96
SH2D3A-201ENST00000245908 MT1FP04733 61 aa9.07□□□□□ -0.96
SH2D3A-201ENST00000245908 KRTAP10-10P60014 251 aa9.03□□□□□ -0.96
SH2D3A-201ENST00000245908 KRTAP9-8Q9BYQ0 159 aa9.02□□□□□ -0.96
SH2D3A-201ENST00000245908 UBR4Q5T4S7 5183 aa9□□□□□ -0.97
SH2D3A-201ENST00000245908 KRTAP19-8Q3LI54 63 aa8.92□□□□□ -0.98
SH2D3A-201ENST00000245908 LCE3AQ5TA76 89 aa8.82□□□□□ -1
SH2D3A-201ENST00000245908 MT1BP07438 61 aa8.78□□□□□ -1
SH2D3A-201ENST00000245908 KRTAP10-5P60370 271 aa8.71□□□□□ -1.02
SH2D3A-201ENST00000245908 MT1XP80297 61 aa8.7□□□□□ -1.02
SH2D3A-201ENST00000245908 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
SH2D3A-201ENST00000245908 KRTAP9-3Q9BYQ3 159 aa8.65□□□□□ -1.02
SH2D3A-201ENST00000245908 KRTAP8-1Q8IUC2 63 aa8.64□□□□□ -1.03
SH2D3A-201ENST00000245908 INE1O15225 51 aa8.51□□□□□ -1.05
SH2D3A-201ENST00000245908 KRTAP10-12P60413 245 aa8.51□□□□□ -1.05
SH2D3A-201ENST00000245908 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
SH2D3A-201ENST00000245908 KRTAP12-3P60328 96 aa8.41□□□□□ -1.06
SH2D3A-201ENST00000245908 LCE2BO14633 110 aa8.29□□□□□ -1.08
SH2D3A-201ENST00000245908 LCE2AQ5TA79 106 aaPredicted RBP8.2□□□□□ -1.1
SH2D3A-201ENST00000245908 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
SH2D3A-201ENST00000245908 USH2AO75445 5202 aa7.93□□□□□ -1.14
SH2D3A-201ENST00000245908 LCE3CQ5T5A8 94 aa7.92□□□□□ -1.14
SH2D3A-201ENST00000245908 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
SH2D3A-201ENST00000245908 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
SH2D3A-201ENST00000245908 KMT2DO14686 5537 aa7.81□□□□□ -1.16
SH2D3A-201ENST00000245908 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
SH2D3A-201ENST00000245908 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
SH2D3A-201ENST00000245908 SSPOA2VEC9 5147 aa7.6□□□□□ -1.19
SH2D3A-201ENST00000245908 KRTAP19-4Q3LI73 84 aa7.6□□□□□ -1.19
SH2D3A-201ENST00000245908 MT1EP04732 61 aa7.54□□□□□ -1.2
SH2D3A-201ENST00000245908 MT1LQ93083 61 aa7.53□□□□□ -1.2
SH2D3A-201ENST00000245908 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
SH2D3A-201ENST00000245908 KRTAP19-6Q3LI70 58 aa7.5□□□□□ -1.21
SH2D3A-201ENST00000245908 KRTAP2-3P0C7H8 128 aa7.38□□□□□ -1.23
SH2D3A-201ENST00000245908 KRTAP2-4Q9BYR9 128 aa7.38□□□□□ -1.23
SH2D3A-201ENST00000245908 KRTAP2-1Q9BYU5 128 aa7.38□□□□□ -1.23
SH2D3A-201ENST00000245908 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms