RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
CDKN1A-201ENST00000244741 A8MUU9 505 aa9.04□□□□□ -0.96
CDKN1A-201ENST00000244741 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
CDKN1A-201ENST00000244741 A0A1B0GU69 56 aa9.02□□□□□ -0.97
CDKN1A-201ENST00000244741 RPL37P61927 97 aaKnown RBP8.96□□□□□ -0.98
CDKN1A-201ENST00000244741 UBR4Q5T4S7 5183 aa8.95□□□□□ -0.98
CDKN1A-201ENST00000244741 A6NN06 94 aa8.94□□□□□ -0.98
CDKN1A-201ENST00000244741 MUC2Q02817 5179 aa8.9□□□□□ -0.98
CDKN1A-201ENST00000244741 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
CDKN1A-201ENST00000244741 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
CDKN1A-201ENST00000244741 KTN1-AS1Q86SY8 53 aa8.83□□□□□ -1
CDKN1A-201ENST00000244741 MUC17Q685J3 4493 aa8.83□□□□□ -1
CDKN1A-201ENST00000244741 UQCR11O14957 56 aa8.83□□□□□ -1
CDKN1A-201ENST00000244741 SEC61BP60468 96 aaKnown RBP8.83□□□□□ -1
CDKN1A-201ENST00000244741 RNF213Q63HN8 5207 aa8.82□□□□□ -1
CDKN1A-201ENST00000244741 MIR22HGQ0VDD5 57 aa8.8□□□□□ -1
CDKN1A-201ENST00000244741 SEC61GP60059 68 aa8.78□□□□□ -1
CDKN1A-201ENST00000244741 KRTAP4-1Q9BYQ7 146 aa8.78□□□□□ -1
CDKN1A-201ENST00000244741 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
CDKN1A-201ENST00000244741 H0YAA0 97 aa8.59□□□□□ -1.03
CDKN1A-201ENST00000244741 RBM12B-AS1Q9P1G2 102 aa8.58□□□□□ -1.04
CDKN1A-201ENST00000244741 A0A1B0GU33 70 aa8.57□□□□□ -1.04
CDKN1A-201ENST00000244741 H1FX-AS1Q4G0G2 97 aa8.55□□□□□ -1.04
CDKN1A-201ENST00000244741 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
CDKN1A-201ENST00000244741 PRAC1Q96KF2 57 aa8.53□□□□□ -1.04
CDKN1A-201ENST00000244741 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
CDKN1A-201ENST00000244741 FAT4Q6V0I7 4981 aa8.5□□□□□ -1.05
CDKN1A-201ENST00000244741 KRTAP19-2Q3LHN2 52 aa8.42□□□□□ -1.06
CDKN1A-201ENST00000244741 S4R3F8 94 aa8.41□□□□□ -1.06
CDKN1A-201ENST00000244741 KRTAP10-6P60371 365 aaPredicted RBP8.39□□□□□ -1.07
CDKN1A-201ENST00000244741 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
CDKN1A-201ENST00000244741 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
CDKN1A-201ENST00000244741 FLGP20930 4061 aaPredicted RBP8.34□□□□□ -1.07
CDKN1A-201ENST00000244741 KRTAP13-4Q3LI77 160 aa8.29□□□□□ -1.08
CDKN1A-201ENST00000244741 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
CDKN1A-201ENST00000244741 P0C880 135 aa8.25□□□□□ -1.09
CDKN1A-201ENST00000244741 K7ERS5 55 aa8.22□□□□□ -1.09
CDKN1A-201ENST00000244741 MT1HP80294 61 aa8.22□□□□□ -1.09
CDKN1A-201ENST00000244741 A0A0D9SG42 100 aa8.19□□□□□ -1.1
CDKN1A-201ENST00000244741 M0R2T5 61 aa8.16□□□□□ -1.1
CDKN1A-201ENST00000244741 LINC01554Q52M75 96 aa8.16□□□□□ -1.1
CDKN1A-201ENST00000244741 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
CDKN1A-201ENST00000244741 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
CDKN1A-201ENST00000244741 ROMO1P60602 79 aa8.05□□□□□ -1.12
CDKN1A-201ENST00000244741 CRIPTQ9P021 101 aa8.04□□□□□ -1.12
CDKN1A-201ENST00000244741 KRTAP12-2P59991 146 aa8□□□□□ -1.13
CDKN1A-201ENST00000244741 M0QZ58 72 aa7.95□□□□□ -1.14
CDKN1A-201ENST00000244741 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
CDKN1A-201ENST00000244741 SPINT4Q6UDR6 99 aa7.92□□□□□ -1.14
CDKN1A-201ENST00000244741 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
CDKN1A-201ENST00000244741 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
CDKN1A-201ENST00000244741 MT2AP02795 61 aa7.82□□□□□ -1.16
CDKN1A-201ENST00000244741 MT1FP04733 61 aa7.79□□□□□ -1.16
CDKN1A-201ENST00000244741 R4GN34 69 aa7.78□□□□□ -1.16
CDKN1A-201ENST00000244741 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
CDKN1A-201ENST00000244741 KRTAP10-10P60014 251 aa7.77□□□□□ -1.17
CDKN1A-201ENST00000244741 KRTAP9-3Q9BYQ3 159 aa7.58□□□□□ -1.2
CDKN1A-201ENST00000244741 H3BS24 57 aa7.56□□□□□ -1.2
CDKN1A-201ENST00000244741 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
CDKN1A-201ENST00000244741 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
CDKN1A-201ENST00000244741 LCE2BO14633 110 aa7.46□□□□□ -1.21
CDKN1A-201ENST00000244741 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
CDKN1A-201ENST00000244741 USH2AO75445 5202 aa7.44□□□□□ -1.22
CDKN1A-201ENST00000244741 LCE2DQ5TA82 110 aaPredicted RBP7.38□□□□□ -1.23
CDKN1A-201ENST00000244741 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
CDKN1A-201ENST00000244741 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
CDKN1A-201ENST00000244741 KRTAP15-1Q3LI76 137 aa7.35□□□□□ -1.23
CDKN1A-201ENST00000244741 KRTAP19-8Q3LI54 63 aa7.29□□□□□ -1.24
CDKN1A-201ENST00000244741 MT1BP07438 61 aa7.28□□□□□ -1.24
CDKN1A-201ENST00000244741 SSPOA2VEC9 5147 aa7.23□□□□□ -1.25
CDKN1A-201ENST00000244741 PLAC4Q8WY50 150 aa7.18□□□□□ -1.26
CDKN1A-201ENST00000244741 PP632Q6XCG6 107 aa7.15□□□□□ -1.27
CDKN1A-201ENST00000244741 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
CDKN1A-201ENST00000244741 TNP1P09430 55 aa7.08□□□□□ -1.28
CDKN1A-201ENST00000244741 CRCT1Q9UGL9 99 aa7.03□□□□□ -1.28
CDKN1A-201ENST00000244741 KRTAP19-6Q3LI70 58 aa6.99□□□□□ -1.29
CDKN1A-201ENST00000244741 MT1XP80297 61 aa6.99□□□□□ -1.29
CDKN1A-201ENST00000244741 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
CDKN1A-201ENST00000244741 FCGBPQ9Y6R7 5405 aaPredicted RBP6.97□□□□□ -1.29
CDKN1A-201ENST00000244741 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.29
CDKN1A-201ENST00000244741 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
CDKN1A-201ENST00000244741 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
CDKN1A-201ENST00000244741 KMT2DO14686 5537 aa6.76□□□□□ -1.33
CDKN1A-201ENST00000244741 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
CDKN1A-201ENST00000244741 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
CDKN1A-201ENST00000244741 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.34
CDKN1A-201ENST00000244741 LUZP6Q538Z0 58 aa6.69□□□□□ -1.34
CDKN1A-201ENST00000244741 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
CDKN1A-201ENST00000244741 SYNE2Q8WXH0 6885 aaKnown RBP6.61□□□□□ -1.35
CDKN1A-201ENST00000244741 KRTAP4-8A0A0G2JLE6 195 aa6.58□□□□□ -1.36
CDKN1A-201ENST00000244741 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
CDKN1A-201ENST00000244741 KRTAP4-8Q9BYQ9 185 aa6.58□□□□□ -1.36
CDKN1A-201ENST00000244741 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
CDKN1A-201ENST00000244741 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
CDKN1A-201ENST00000244741 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
CDKN1A-201ENST00000244741 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
CDKN1A-201ENST00000244741 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
CDKN1A-201ENST00000244741 KRTAP19-5Q3LI72 72 aa6.27□□□□□ -1.41
CDKN1A-201ENST00000244741 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
CDKN1A-201ENST00000244741 KRTAP9-7A8MTY7 169 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms