RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 KRTAP13-4Q3LI77 160 aa9.63□□□□□ -0.87
CHPF-201ENST00000243776 KMT2CQ8NEZ4 4911 aaKnown RBP9.59□□□□□ -0.87
CHPF-201ENST00000243776 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
CHPF-201ENST00000243776 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
CHPF-201ENST00000243776 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
CHPF-201ENST00000243776 ROMO1P60602 79 aa9.57□□□□□ -0.88
CHPF-201ENST00000243776 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
CHPF-201ENST00000243776 TNXBP22105 4242 aa9.53□□□□□ -0.88
CHPF-201ENST00000243776 RPL37P61927 97 aaKnown RBP9.51□□□□□ -0.89
CHPF-201ENST00000243776 RYR2Q92736 4967 aa9.49□□□□□ -0.89
CHPF-201ENST00000243776 P0C880 135 aa9.49□□□□□ -0.89
CHPF-201ENST00000243776 KRTAP3-2Q9BYR7 98 aa9.48□□□□□ -0.89
CHPF-201ENST00000243776 C10orf95Q9H7T3 257 aa9.48□□□□□ -0.89
CHPF-201ENST00000243776 LPAP08519 4548 aa9.46□□□□□ -0.9
CHPF-201ENST00000243776 S4R3F8 94 aa9.45□□□□□ -0.9
CHPF-201ENST00000243776 TPRXLQ17RH7 258 aa9.42□□□□□ -0.9
CHPF-201ENST00000243776 XP32Q5T750 250 aa9.4□□□□□ -0.9
CHPF-201ENST00000243776 SPINT4Q6UDR6 99 aa9.34□□□□□ -0.91
CHPF-201ENST00000243776 KRTAP21-3Q3LHN1 58 aa9.34□□□□□ -0.91
CHPF-201ENST00000243776 Q5VSD8 79 aa9.33□□□□□ -0.92
CHPF-201ENST00000243776 LRP2P98164 4655 aa9.33□□□□□ -0.92
CHPF-201ENST00000243776 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
CHPF-201ENST00000243776 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
CHPF-201ENST00000243776 KIAA1109Q2LD37 5005 aa9.25□□□□□ -0.93
CHPF-201ENST00000243776 RYR3Q15413 4870 aa9.19□□□□□ -0.94
CHPF-201ENST00000243776 RYR1P21817 5038 aa9.18□□□□□ -0.94
CHPF-201ENST00000243776 KRTAP12-1P59990 96 aa9.15□□□□□ -0.94
CHPF-201ENST00000243776 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
CHPF-201ENST00000243776 MT1HL1P0DM35 61 aa9.04□□□□□ -0.96
CHPF-201ENST00000243776 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
CHPF-201ENST00000243776 KRTAP15-1Q3LI76 137 aa8.96□□□□□ -0.98
CHPF-201ENST00000243776 M0QZ58 72 aa8.95□□□□□ -0.98
CHPF-201ENST00000243776 EPPK1P58107 5090 aaKnown RBP8.88□□□□□ -0.99
CHPF-201ENST00000243776 R4GN34 69 aa8.86□□□□□ -0.99
CHPF-201ENST00000243776 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
CHPF-201ENST00000243776 KRTAP4-5Q9BYR2 181 aa8.72□□□□□ -1.01
CHPF-201ENST00000243776 MUC2Q02817 5179 aa8.69□□□□□ -1.02
CHPF-201ENST00000243776 MUC17Q685J3 4493 aa8.67□□□□□ -1.02
CHPF-201ENST00000243776 KRTAP4-1Q9BYQ7 146 aa8.63□□□□□ -1.03
CHPF-201ENST00000243776 PLAC4Q8WY50 150 aa8.54□□□□□ -1.04
CHPF-201ENST00000243776 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
CHPF-201ENST00000243776 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
CHPF-201ENST00000243776 J3QL48 77 aa8.44□□□□□ -1.06
CHPF-201ENST00000243776 HERC2O95714 4834 aa8.41□□□□□ -1.06
CHPF-201ENST00000243776 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
CHPF-201ENST00000243776 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
CHPF-201ENST00000243776 FLGP20930 4061 aaPredicted RBP8.24□□□□□ -1.09
CHPF-201ENST00000243776 FAT4Q6V0I7 4981 aa8.23□□□□□ -1.09
CHPF-201ENST00000243776 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
CHPF-201ENST00000243776 HERC1Q15751 4861 aa8.18□□□□□ -1.1
CHPF-201ENST00000243776 PP632Q6XCG6 107 aa8.14□□□□□ -1.11
CHPF-201ENST00000243776 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
CHPF-201ENST00000243776 TNP1P09430 55 aa8.06□□□□□ -1.12
CHPF-201ENST00000243776 RNF213Q63HN8 5207 aa7.97□□□□□ -1.13
CHPF-201ENST00000243776 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
CHPF-201ENST00000243776 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
CHPF-201ENST00000243776 M0R2T5 61 aa7.83□□□□□ -1.16
CHPF-201ENST00000243776 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
CHPF-201ENST00000243776 KRTAP19-1Q8IUB9 90 aa7.75□□□□□ -1.17
CHPF-201ENST00000243776 UBR4Q5T4S7 5183 aa7.75□□□□□ -1.17
CHPF-201ENST00000243776 LCE3AQ5TA76 89 aa7.72□□□□□ -1.17
CHPF-201ENST00000243776 SPRR5A0A1B0GTR4 108 aa7.69□□□□□ -1.18
CHPF-201ENST00000243776 SPRR2GQ9BYE4 73 aa7.68□□□□□ -1.18
CHPF-201ENST00000243776 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
CHPF-201ENST00000243776 KRTAP10-10P60014 251 aa7.64□□□□□ -1.19
CHPF-201ENST00000243776 MT1FP04733 61 aa7.57□□□□□ -1.2
CHPF-201ENST00000243776 MT1HP80294 61 aa7.56□□□□□ -1.2
CHPF-201ENST00000243776 MT2AP02795 61 aa7.52□□□□□ -1.21
CHPF-201ENST00000243776 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.22
CHPF-201ENST00000243776 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
CHPF-201ENST00000243776 MT1XP80297 61 aa7.32□□□□□ -1.24
CHPF-201ENST00000243776 KRTAP8-1Q8IUC2 63 aa7.31□□□□□ -1.24
CHPF-201ENST00000243776 MT1BP07438 61 aa7.31□□□□□ -1.24
CHPF-201ENST00000243776 KRTAP12-3P60328 96 aa7.27□□□□□ -1.24
CHPF-201ENST00000243776 KRTAP10-7P60409 375 aaPredicted RBP7.25□□□□□ -1.25
CHPF-201ENST00000243776 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
CHPF-201ENST00000243776 KRTAP19-8Q3LI54 63 aa7.25□□□□□ -1.25
CHPF-201ENST00000243776 KMT2DO14686 5537 aa7.24□□□□□ -1.25
CHPF-201ENST00000243776 USH2AO75445 5202 aa7.23□□□□□ -1.25
CHPF-201ENST00000243776 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
CHPF-201ENST00000243776 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
CHPF-201ENST00000243776 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
CHPF-201ENST00000243776 INE1O15225 51 aa6.91□□□□□ -1.3
CHPF-201ENST00000243776 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
CHPF-201ENST00000243776 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
CHPF-201ENST00000243776 LCE2BO14633 110 aa6.84□□□□□ -1.31
CHPF-201ENST00000243776 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
CHPF-201ENST00000243776 KRTAP4-7Q9BYR0 210 aa6.73□□□□□ -1.33
CHPF-201ENST00000243776 KRTAP9-6A8MVA2 160 aa6.73□□□□□ -1.33
CHPF-201ENST00000243776 FSIP2Q5CZC0 6907 aa6.61□□□□□ -1.35
CHPF-201ENST00000243776 KRTAP19-7Q3SYF9 63 aa6.51□□□□□ -1.37
CHPF-201ENST00000243776 LCE2AQ5TA79 106 aaPredicted RBP6.49□□□□□ -1.37
CHPF-201ENST00000243776 SSPOA2VEC9 5147 aa6.37□□□□□ -1.39
CHPF-201ENST00000243776 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
CHPF-201ENST00000243776 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
CHPF-201ENST00000243776 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
CHPF-201ENST00000243776 MT1LQ93083 61 aa6.33□□□□□ -1.4
CHPF-201ENST00000243776 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
CHPF-201ENST00000243776 MT1EP04732 61 aa6.28□□□□□ -1.4
CHPF-201ENST00000243776 LOC100996750A0A140TA64 210 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms