RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 Q5VV11 94 aa9.46□□□□□ -0.89
SNX17-201ENST00000233575 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
SNX17-201ENST00000233575 ACYP2P14621 99 aa9.43□□□□□ -0.9
SNX17-201ENST00000233575 COA5Q86WW8 74 aa9.43□□□□□ -0.9
SNX17-201ENST00000233575 RNF213Q63HN8 5207 aa9.42□□□□□ -0.9
SNX17-201ENST00000233575 KTN1-AS1Q86SY8 53 aa9.38□□□□□ -0.91
SNX17-201ENST00000233575 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
SNX17-201ENST00000233575 A8MU10 97 aa9.34□□□□□ -0.91
SNX17-201ENST00000233575 RBM12B-AS1Q9P1G2 102 aa9.34□□□□□ -0.91
SNX17-201ENST00000233575 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
SNX17-201ENST00000233575 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
SNX17-201ENST00000233575 LCA10Q71F78 164 aa9.27□□□□□ -0.93
SNX17-201ENST00000233575 A6NN06 94 aa9.25□□□□□ -0.93
SNX17-201ENST00000233575 H1FX-AS1Q4G0G2 97 aa9.24□□□□□ -0.93
SNX17-201ENST00000233575 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
SNX17-201ENST00000233575 SPTSSBQ8NFR3 76 aa9.22□□□□□ -0.93
SNX17-201ENST00000233575 A6NED7 52 aa9.22□□□□□ -0.93
SNX17-201ENST00000233575 LINC01558Q9Y6Z2 57 aa9.18□□□□□ -0.94
SNX17-201ENST00000233575 S4R3F8 94 aa9.17□□□□□ -0.94
SNX17-201ENST00000233575 FAT4Q6V0I7 4981 aa9.16□□□□□ -0.94
SNX17-201ENST00000233575 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
SNX17-201ENST00000233575 FLGP20930 4061 aaPredicted RBP9.1□□□□□ -0.95
SNX17-201ENST00000233575 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
SNX17-201ENST00000233575 CSAG1Q6PB30 78 aa8.95□□□□□ -0.98
SNX17-201ENST00000233575 A0A1B0GU69 56 aa8.91□□□□□ -0.98
SNX17-201ENST00000233575 MT1HP80294 61 aa8.91□□□□□ -0.98
SNX17-201ENST00000233575 KRTAP3-2Q9BYR7 98 aa8.8□□□□□ -1
SNX17-201ENST00000233575 M0R2T5 61 aa8.79□□□□□ -1
SNX17-201ENST00000233575 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
SNX17-201ENST00000233575 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
SNX17-201ENST00000233575 P0C880 135 aa8.76□□□□□ -1.01
SNX17-201ENST00000233575 PRAC1Q96KF2 57 aa8.75□□□□□ -1.01
SNX17-201ENST00000233575 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
SNX17-201ENST00000233575 SPATA8Q6RVD6 105 aa8.74□□□□□ -1.01
SNX17-201ENST00000233575 H0YAA0 97 aa8.72□□□□□ -1.01
SNX17-201ENST00000233575 A0A1B0GU33 70 aa8.64□□□□□ -1.03
SNX17-201ENST00000233575 UQCR11O14957 56 aa8.64□□□□□ -1.03
SNX17-201ENST00000233575 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SNX17-201ENST00000233575 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
SNX17-201ENST00000233575 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
SNX17-201ENST00000233575 KRTAP9-8Q9BYQ0 159 aa8.57□□□□□ -1.04
SNX17-201ENST00000233575 KRTAP13-4Q3LI77 160 aa8.56□□□□□ -1.04
SNX17-201ENST00000233575 MT2AP02795 61 aa8.54□□□□□ -1.04
SNX17-201ENST00000233575 H3BS24 57 aa8.53□□□□□ -1.04
SNX17-201ENST00000233575 MT1FP04733 61 aa8.51□□□□□ -1.05
SNX17-201ENST00000233575 M0QZ58 72 aa8.45□□□□□ -1.06
SNX17-201ENST00000233575 R4GN34 69 aa8.44□□□□□ -1.06
SNX17-201ENST00000233575 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
SNX17-201ENST00000233575 A0A0D9SG42 100 aa8.37□□□□□ -1.07
SNX17-201ENST00000233575 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
SNX17-201ENST00000233575 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
SNX17-201ENST00000233575 SPRR2GQ9BYE4 73 aa8.27□□□□□ -1.09
SNX17-201ENST00000233575 KRTAP9-3Q9BYQ3 159 aa8.26□□□□□ -1.09
SNX17-201ENST00000233575 KRTAP25-1Q3LHN0 102 aa8.25□□□□□ -1.09
SNX17-201ENST00000233575 KRTAP12-1P59990 96 aa8.19□□□□□ -1.1
SNX17-201ENST00000233575 KRTAP12-2P59991 146 aa8.19□□□□□ -1.1
SNX17-201ENST00000233575 ROMO1P60602 79 aa8.19□□□□□ -1.1
SNX17-201ENST00000233575 SPINT4Q6UDR6 99 aa8.17□□□□□ -1.1
SNX17-201ENST00000233575 K7ERS5 55 aa8.13□□□□□ -1.11
SNX17-201ENST00000233575 LCE2BO14633 110 aa8.08□□□□□ -1.12
SNX17-201ENST00000233575 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
SNX17-201ENST00000233575 MT1BP07438 61 aa8.02□□□□□ -1.13
SNX17-201ENST00000233575 USH2AO75445 5202 aa7.99□□□□□ -1.13
SNX17-201ENST00000233575 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
SNX17-201ENST00000233575 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.15
SNX17-201ENST00000233575 FSIP2Q5CZC0 6907 aa7.84□□□□□ -1.15
SNX17-201ENST00000233575 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
SNX17-201ENST00000233575 C10orf95Q9H7T3 257 aa7.78□□□□□ -1.16
SNX17-201ENST00000233575 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
SNX17-201ENST00000233575 MT1XP80297 61 aa7.74□□□□□ -1.17
SNX17-201ENST00000233575 KRTAP10-5P60370 271 aa7.72□□□□□ -1.17
SNX17-201ENST00000233575 KRTAP15-1Q3LI76 137 aa7.65□□□□□ -1.18
SNX17-201ENST00000233575 KRTAP9-2Q9BYQ4 174 aa7.62□□□□□ -1.19
SNX17-201ENST00000233575 PRO2289Q9P1D8 64 aa7.56□□□□□ -1.2
SNX17-201ENST00000233575 NDUFAF8A1L188 74 aa7.56□□□□□ -1.2
SNX17-201ENST00000233575 KRTAP19-6Q3LI70 58 aa7.54□□□□□ -1.2
SNX17-201ENST00000233575 TNP1P09430 55 aa7.47□□□□□ -1.21
SNX17-201ENST00000233575 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
SNX17-201ENST00000233575 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
SNX17-201ENST00000233575 KMT2DO14686 5537 aa7.33□□□□□ -1.24
SNX17-201ENST00000233575 CRCT1Q9UGL9 99 aa7.32□□□□□ -1.24
SNX17-201ENST00000233575 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
SNX17-201ENST00000233575 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
SNX17-201ENST00000233575 KRTAP4-8A0A0G2JLE6 195 aa7.21□□□□□ -1.26
SNX17-201ENST00000233575 PP632Q6XCG6 107 aa7.21□□□□□ -1.26
SNX17-201ENST00000233575 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
SNX17-201ENST00000233575 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
SNX17-201ENST00000233575 MACF1Q9UPN3 7388 aaKnown RBP7.14□□□□□ -1.27
SNX17-201ENST00000233575 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
SNX17-201ENST00000233575 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
SNX17-201ENST00000233575 LUZP6Q538Z0 58 aa7.04□□□□□ -1.28
SNX17-201ENST00000233575 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SNX17-201ENST00000233575 SYNE2Q8WXH0 6885 aaKnown RBP6.97□□□□□ -1.29
SNX17-201ENST00000233575 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
SNX17-201ENST00000233575 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
SNX17-201ENST00000233575 KRTAP19-7Q3SYF9 63 aa6.91□□□□□ -1.3
SNX17-201ENST00000233575 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.79□□□□□ -1.32
SNX17-201ENST00000233575 MUC12Q9UKN1 5478 aa6.78□□□□□ -1.32
SNX17-201ENST00000233575 MT1EP04732 61 aa6.77□□□□□ -1.32
SNX17-201ENST00000233575 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms