RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 USH2AO75445 5202 aa9.13□□□□□ -0.95
CENPA-201ENST00000233505 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
CENPA-201ENST00000233505 LCA10Q71F78 164 aa9.12□□□□□ -0.95
CENPA-201ENST00000233505 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
CENPA-201ENST00000233505 SSPOA2VEC9 5147 aa9.06□□□□□ -0.96
CENPA-201ENST00000233505 KRTAP9-3Q9BYQ3 159 aa9.05□□□□□ -0.96
CENPA-201ENST00000233505 LOC100996750A0A140TA64 210 aa8.99□□□□□ -0.97
CENPA-201ENST00000233505 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
CENPA-201ENST00000233505 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
CENPA-201ENST00000233505 KRTAP4-6Q9BYQ5 205 aa8.99□□□□□ -0.97
CENPA-201ENST00000233505 NDUFC1O43677 76 aa8.96□□□□□ -0.98
CENPA-201ENST00000233505 SNURFQ9Y675 71 aa8.89□□□□□ -0.99
CENPA-201ENST00000233505 C20orf197Q8N268 126 aa8.88□□□□□ -0.99
CENPA-201ENST00000233505 FCGBPQ9Y6R7 5405 aaPredicted RBP8.84□□□□□ -0.99
CENPA-201ENST00000233505 H0YAA0 97 aa8.84□□□□□ -0.99
CENPA-201ENST00000233505 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.82□□□□□ -1
CENPA-201ENST00000233505 SPANXA2-OT1Q8N9U9 137 aa8.82□□□□□ -1
CENPA-201ENST00000233505 COX7CP15954 63 aa8.81□□□□□ -1
CENPA-201ENST00000233505 ACYP2P14621 99 aa8.8□□□□□ -1
CENPA-201ENST00000233505 KRTAP19-1Q8IUB9 90 aa8.79□□□□□ -1
CENPA-201ENST00000233505 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
CENPA-201ENST00000233505 KRTAP9-7A8MTY7 169 aa8.72□□□□□ -1.01
CENPA-201ENST00000233505 SPRR2GQ9BYE4 73 aa8.72□□□□□ -1.01
CENPA-201ENST00000233505 ADM2Q7Z4H4 148 aa8.67□□□□□ -1.02
CENPA-201ENST00000233505 SPTSSBQ8NFR3 76 aa8.66□□□□□ -1.02
CENPA-201ENST00000233505 ANAPC13Q9BS18 74 aa8.66□□□□□ -1.02
CENPA-201ENST00000233505 CHKB-CPT1BH3BT56 60 aa8.63□□□□□ -1.03
CENPA-201ENST00000233505 KRTAP19-8Q3LI54 63 aa8.61□□□□□ -1.03
CENPA-201ENST00000233505 H7BZZ5 65 aa8.6□□□□□ -1.03
CENPA-201ENST00000233505 MACF1Q9UPN3 7388 aaKnown RBP8.6□□□□□ -1.03
CENPA-201ENST00000233505 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
CENPA-201ENST00000233505 CYSTM1Q9H1C7 97 aa8.57□□□□□ -1.04
CENPA-201ENST00000233505 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
CENPA-201ENST00000233505 Q5VV11 94 aa8.54□□□□□ -1.04
CENPA-201ENST00000233505 MT1BP07438 61 aa8.53□□□□□ -1.04
CENPA-201ENST00000233505 P0C880 135 aa8.52□□□□□ -1.05
CENPA-201ENST00000233505 COA5Q86WW8 74 aa8.5□□□□□ -1.05
CENPA-201ENST00000233505 CCDC179H3BU77 68 aa8.46□□□□□ -1.06
CENPA-201ENST00000233505 R4GN34 69 aa8.44□□□□□ -1.06
CENPA-201ENST00000233505 M0QZ58 72 aa8.38□□□□□ -1.07
CENPA-201ENST00000233505 ATP5EP56381 51 aaPredicted RBP8.34□□□□□ -1.07
CENPA-201ENST00000233505 A6NN06 94 aa8.28□□□□□ -1.08
CENPA-201ENST00000233505 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
CENPA-201ENST00000233505 PCP4P48539 62 aa8.25□□□□□ -1.09
CENPA-201ENST00000233505 TMEM258P61165 79 aa8.23□□□□□ -1.09
CENPA-201ENST00000233505 PLAC4Q8WY50 150 aa8.22□□□□□ -1.09
CENPA-201ENST00000233505 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
CENPA-201ENST00000233505 SEC61GP60059 68 aa8.21□□□□□ -1.1
CENPA-201ENST00000233505 KRTAP6-3Q3LI67 103 aa8.19□□□□□ -1.1
CENPA-201ENST00000233505 LINC01554Q52M75 96 aa8.19□□□□□ -1.1
CENPA-201ENST00000233505 SERP1Q9Y6X1 66 aa8.19□□□□□ -1.1
CENPA-201ENST00000233505 PRO2289Q9P1D8 64 aa8.12□□□□□ -1.11
CENPA-201ENST00000233505 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
CENPA-201ENST00000233505 MT1XP80297 61 aa8.09□□□□□ -1.11
CENPA-201ENST00000233505 A0A1B0GU69 56 aa8.05□□□□□ -1.12
CENPA-201ENST00000233505 A0A1B0GU33 70 aa8.04□□□□□ -1.12
CENPA-201ENST00000233505 NEBP20929 6669 aa8.04□□□□□ -1.12
CENPA-201ENST00000233505 MUC12Q9UKN1 5478 aa7.99□□□□□ -1.13
CENPA-201ENST00000233505 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
CENPA-201ENST00000233505 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
CENPA-201ENST00000233505 SPATA8Q6RVD6 105 aa7.92□□□□□ -1.14
CENPA-201ENST00000233505 LCE3BQ5TA77 95 aa7.88□□□□□ -1.15
CENPA-201ENST00000233505 KRTAP12-2P59991 146 aa7.87□□□□□ -1.15
CENPA-201ENST00000233505 A0A0D9SG42 100 aa7.86□□□□□ -1.15
CENPA-201ENST00000233505 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
CENPA-201ENST00000233505 KRTAP4-12Q9BQ66 201 aa7.83□□□□□ -1.16
CENPA-201ENST00000233505 KMT2DO14686 5537 aa7.81□□□□□ -1.16
CENPA-201ENST00000233505 CAMK2N1Q7Z7J9 78 aa7.8□□□□□ -1.16
CENPA-201ENST00000233505 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
CENPA-201ENST00000233505 KRTAP5-9P26371 169 aa7.78□□□□□ -1.16
CENPA-201ENST00000233505 KRTAP12-1P59990 96 aa7.77□□□□□ -1.17
CENPA-201ENST00000233505 SPINT4Q6UDR6 99 aa7.73□□□□□ -1.17
CENPA-201ENST00000233505 V9GYY9 64 aa7.72□□□□□ -1.17
CENPA-201ENST00000233505 A8MU10 97 aa7.7□□□□□ -1.18
CENPA-201ENST00000233505 KRTAP10-12P60413 245 aa7.7□□□□□ -1.18
CENPA-201ENST00000233505 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
CENPA-201ENST00000233505 UQCR11O14957 56 aa7.68□□□□□ -1.18
CENPA-201ENST00000233505 Q1T7F1 81 aa7.67□□□□□ -1.18
CENPA-201ENST00000233505 RPS28P62857 69 aaKnown RBP7.64□□□□□ -1.19
CENPA-201ENST00000233505 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
CENPA-201ENST00000233505 KRTAP9-9Q9BYP9 154 aa7.64□□□□□ -1.19
CENPA-201ENST00000233505 KRTAP9-4Q9BYQ2 154 aa7.64□□□□□ -1.19
CENPA-201ENST00000233505 KRTAP8-1Q8IUC2 63 aa7.61□□□□□ -1.19
CENPA-201ENST00000233505 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CENPA-201ENST00000233505 SPRR2FQ96RM1 72 aa7.57□□□□□ -1.2
CENPA-201ENST00000233505 PSPHP1O15172 72 aa7.54□□□□□ -1.2
CENPA-201ENST00000233505 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
CENPA-201ENST00000233505 SPRR2EP22531 72 aa7.49□□□□□ -1.21
CENPA-201ENST00000233505 SPRR2BP35325 72 aa7.49□□□□□ -1.21
CENPA-201ENST00000233505 SPRR2AP35326 72 aa7.49□□□□□ -1.21
CENPA-201ENST00000233505 KRTAP2-3P0C7H8 128 aa7.39□□□□□ -1.23
CENPA-201ENST00000233505 KRTAP2-4Q9BYR9 128 aa7.39□□□□□ -1.23
CENPA-201ENST00000233505 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
CENPA-201ENST00000233505 LCE1AQ5T7P2 110 aa7.36□□□□□ -1.23
CENPA-201ENST00000233505 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
CENPA-201ENST00000233505 A6NED7 52 aa7.33□□□□□ -1.24
CENPA-201ENST00000233505 K7ERS5 55 aa7.33□□□□□ -1.24
CENPA-201ENST00000233505 SVIPQ8NHG7 77 aa7.33□□□□□ -1.24
CENPA-201ENST00000233505 TNP1P09430 55 aa7.31□□□□□ -1.24
CENPA-201ENST00000233505 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms