RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 Q96NJ1 140 aa3.13□□□□□ -1.91
TRAPPC13-201ENST00000231526 CSAG1Q6PB30 78 aa3.12□□□□□ -1.91
TRAPPC13-201ENST00000231526 H3BPC8 53 aa3.11□□□□□ -1.91
TRAPPC13-201ENST00000231526 FLG2Q5D862 2391 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC13-201ENST00000231526 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
TRAPPC13-201ENST00000231526 LOC101927531A0A1B0GV80 90 aa3.1□□□□□ -1.91
TRAPPC13-201ENST00000231526 IGLV7-46A0A075B6I9 117 aa3.09□□□□□ -1.92
TRAPPC13-201ENST00000231526 KRTAP10-4P60372 401 aaPredicted RBP3.09□□□□□ -1.92
TRAPPC13-201ENST00000231526 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.92
TRAPPC13-201ENST00000231526 DMBT1Q9UGM3 2413 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 SPINK1P00995 79 aa3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 MMP24-AS1A0A0U1RRL7 71 aa3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 KRTAP29-1A8MX34 341 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 LINC00304Q8N9R0 145 aa3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 PRR15LQ9BU68 103 aa3.08□□□□□ -1.92
TRAPPC13-201ENST00000231526 Q5VSD8 79 aa3.07□□□□□ -1.92
TRAPPC13-201ENST00000231526 ZCCHC13Q8WW36 166 aaKnown RBP3.07□□□□□ -1.92
TRAPPC13-201ENST00000231526 HSPG2P98160 4391 aa3.06□□□□□ -1.92
TRAPPC13-201ENST00000231526 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
TRAPPC13-201ENST00000231526 MRPL34Q9BQ48 92 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-201ENST00000231526 LRP1Q07954 4544 aaKnown RBP3.05□□□□□ -1.92
TRAPPC13-201ENST00000231526 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
TRAPPC13-201ENST00000231526 KIAA1109Q2LD37 5005 aa3.03□□□□□ -1.92
TRAPPC13-201ENST00000231526 H0Y9P7 68 aa3.03□□□□□ -1.92
TRAPPC13-201ENST00000231526 RPS29P62273 56 aaKnown RBP3.03□□□□□ -1.92
TRAPPC13-201ENST00000231526 TP53AIP1Q9HCN2 124 aa3.03□□□□□ -1.92
TRAPPC13-201ENST00000231526 MYCBP2O75592 4640 aa3.02□□□□□ -1.93
TRAPPC13-201ENST00000231526 SPANXA2-OT1Q8N9U9 137 aa3.02□□□□□ -1.93
TRAPPC13-201ENST00000231526 RYR1P21817 5038 aa3.02□□□□□ -1.93
TRAPPC13-201ENST00000231526 EPPK1P58107 5090 aaKnown RBP3.02□□□□□ -1.93
TRAPPC13-201ENST00000231526 IGKV2-30P06310 120 aa3.01□□□□□ -1.93
TRAPPC13-201ENST00000231526 PKHD1L1Q86WI1 4243 aa3.01□□□□□ -1.93
TRAPPC13-201ENST00000231526 TNXBP22105 4242 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 KRTAP10-8P60410 259 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 KRTAP25-1Q3LHN0 102 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 C9orf92A6NGG3 77 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 PCOTHQ58A44 107 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 Q5W150 140 aa2.98□□□□□ -1.93
TRAPPC13-201ENST00000231526 A0A1B0GU33 70 aa2.97□□□□□ -1.93
TRAPPC13-201ENST00000231526 COA5Q86WW8 74 aa2.96□□□□□ -1.94
TRAPPC13-201ENST00000231526 FAT3Q8TDW7 4589 aa2.95□□□□□ -1.94
TRAPPC13-201ENST00000231526 DMAC1Q96GE9 116 aa2.95□□□□□ -1.94
TRAPPC13-201ENST00000231526 SPINK7P58062 85 aa2.94□□□□□ -1.94
TRAPPC13-201ENST00000231526 LINC01558Q9Y6Z2 57 aa2.94□□□□□ -1.94
TRAPPC13-201ENST00000231526 KRTAP13-3Q3SY46 172 aa2.94□□□□□ -1.94
TRAPPC13-201ENST00000231526 IGKV2D-30A0A075B6S6 120 aa2.93□□□□□ -1.94
TRAPPC13-201ENST00000231526 MT1HL1P0DM35 61 aa2.93□□□□□ -1.94
TRAPPC13-201ENST00000231526 HRES1P13985 223 aa2.89□□□□□ -1.95
TRAPPC13-201ENST00000231526 HERC2O95714 4834 aa2.87□□□□□ -1.95
TRAPPC13-201ENST00000231526 ACYP2P14621 99 aa2.85□□□□□ -1.95
TRAPPC13-201ENST00000231526 SPINT4Q6UDR6 99 aa2.85□□□□□ -1.95
TRAPPC13-201ENST00000231526 R4GN34 69 aa2.85□□□□□ -1.95
TRAPPC13-201ENST00000231526 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
TRAPPC13-201ENST00000231526 UQCR11O14957 56 aa2.84□□□□□ -1.95
TRAPPC13-201ENST00000231526 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.95
TRAPPC13-201ENST00000231526 SPATA8Q6RVD6 105 aa2.84□□□□□ -1.95
TRAPPC13-201ENST00000231526 BIRC6Q9NR09 4857 aa2.84□□□□□ -1.95
TRAPPC13-201ENST00000231526 LRP2P98164 4655 aa2.83□□□□□ -1.96
TRAPPC13-201ENST00000231526 TPRXLQ17RH7 258 aa2.83□□□□□ -1.96
TRAPPC13-201ENST00000231526 LPAP08519 4548 aa2.83□□□□□ -1.96
TRAPPC13-201ENST00000231526 PRO2289Q9P1D8 64 aa2.83□□□□□ -1.96
TRAPPC13-201ENST00000231526 A0A1B0GU69 56 aa2.79□□□□□ -1.96
TRAPPC13-201ENST00000231526 COX6B2Q6YFQ2 88 aa2.77□□□□□ -1.97
TRAPPC13-201ENST00000231526 HERC1Q15751 4861 aa2.75□□□□□ -1.97
TRAPPC13-201ENST00000231526 PCLOQ9Y6V0 5065 aa2.74□□□□□ -1.97
TRAPPC13-201ENST00000231526 MUC2Q02817 5179 aa2.7□□□□□ -1.98
TRAPPC13-201ENST00000231526 S4R3F8 94 aa2.69□□□□□ -1.98
TRAPPC13-201ENST00000231526 H1FX-AS1Q4G0G2 97 aa2.69□□□□□ -1.98
TRAPPC13-201ENST00000231526 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
TRAPPC13-201ENST00000231526 MUC17Q685J3 4493 aa2.65□□□□□ -1.99
TRAPPC13-201ENST00000231526 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
TRAPPC13-201ENST00000231526 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
TRAPPC13-201ENST00000231526 H0YAA0 97 aa2.64□□□□□ -1.99
TRAPPC13-201ENST00000231526 LCE1AQ5T7P2 110 aa2.61□□□□□ -1.99
TRAPPC13-201ENST00000231526 CRIPTQ9P021 101 aa2.6□□□□□ -1.99
TRAPPC13-201ENST00000231526 KRTAP10-6P60371 365 aaPredicted RBP2.59□□□□□ -2
TRAPPC13-201ENST00000231526 RNF213Q63HN8 5207 aa2.58□□□□□ -2
TRAPPC13-201ENST00000231526 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
TRAPPC13-201ENST00000231526 KRTAP19-2Q3LHN2 52 aa2.57□□□□□ -2
TRAPPC13-201ENST00000231526 UBR4Q5T4S7 5183 aa2.56□□□□□ -2
TRAPPC13-201ENST00000231526 INE1O15225 51 aa2.55□□□□□ -2
TRAPPC13-201ENST00000231526 FAT4Q6V0I7 4981 aa2.55□□□□□ -2
TRAPPC13-201ENST00000231526 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
TRAPPC13-201ENST00000231526 LCE3CQ5T5A8 94 aa2.55□□□□□ -2
TRAPPC13-201ENST00000231526 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
TRAPPC13-201ENST00000231526 A0A0D9SG42 100 aa2.53□□□□□ -2
TRAPPC13-201ENST00000231526 KRTAP13-4Q3LI77 160 aa2.53□□□□□ -2
TRAPPC13-201ENST00000231526 M0R2T5 61 aa2.52□□□□□ -2.01
TRAPPC13-201ENST00000231526 PLAC4Q8WY50 150 aa2.51□□□□□ -2.01
TRAPPC13-201ENST00000231526 M0QZ58 72 aa2.5□□□□□ -2.01
TRAPPC13-201ENST00000231526 MT1HP80294 61 aa2.47□□□□□ -2.01
TRAPPC13-201ENST00000231526 C10orf95Q9H7T3 257 aa2.47□□□□□ -2.01
TRAPPC13-201ENST00000231526 KRTAP10-7P60409 375 aaPredicted RBP2.45□□□□□ -2.02
TRAPPC13-201ENST00000231526 KRTAP2-2Q9BYT5 123 aa2.45□□□□□ -2.02
TRAPPC13-201ENST00000231526 KRTAP12-2P59991 146 aa2.44□□□□□ -2.02
TRAPPC13-201ENST00000231526 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
TRAPPC13-201ENST00000231526 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
TRAPPC13-201ENST00000231526 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
TRAPPC13-201ENST00000231526 LCE3EQ5T5B0 92 aa2.39□□□□□ -2.03
TRAPPC13-201ENST00000231526 MT2AP02795 61 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms