RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 C20orf166-AS1Q96NR2 134 aa5.45□□□□□ -1.54
MCM3-201ENST00000229854 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
MCM3-201ENST00000229854 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
MCM3-201ENST00000229854 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.55
MCM3-201ENST00000229854 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
MCM3-201ENST00000229854 RYR2Q92736 4967 aa5.38□□□□□ -1.55
MCM3-201ENST00000229854 KRTAP10-6P60371 365 aaPredicted RBP5.37□□□□□ -1.55
MCM3-201ENST00000229854 FAT1Q14517 4588 aa5.35□□□□□ -1.55
MCM3-201ENST00000229854 TNXBP22105 4242 aa5.33□□□□□ -1.56
MCM3-201ENST00000229854 S4R3F8 94 aa5.32□□□□□ -1.56
MCM3-201ENST00000229854 KRTAP3-2Q9BYR7 98 aa5.29□□□□□ -1.56
MCM3-201ENST00000229854 KRTAP3-3Q9BYR6 98 aa5.29□□□□□ -1.56
MCM3-201ENST00000229854 SMR3BP02814 79 aaPredicted RBP5.28□□□□□ -1.56
MCM3-201ENST00000229854 KRTAP12-2P59991 146 aa5.28□□□□□ -1.56
MCM3-201ENST00000229854 KMT2CQ8NEZ4 4911 aaKnown RBP5.28□□□□□ -1.56
MCM3-201ENST00000229854 HSPG2P98160 4391 aa5.28□□□□□ -1.56
MCM3-201ENST00000229854 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
MCM3-201ENST00000229854 A0A0A0MQY5 61 aa5.23□□□□□ -1.57
MCM3-201ENST00000229854 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
MCM3-201ENST00000229854 LRP1Q07954 4544 aaKnown RBP5.18□□□□□ -1.58
MCM3-201ENST00000229854 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
MCM3-201ENST00000229854 XP32Q5T750 250 aa5.16□□□□□ -1.58
MCM3-201ENST00000229854 RYR3Q15413 4870 aa5.13□□□□□ -1.59
MCM3-201ENST00000229854 RYR1P21817 5038 aa5.12□□□□□ -1.59
MCM3-201ENST00000229854 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
MCM3-201ENST00000229854 KRTAP17-1Q9BYP8 105 aa5.07□□□□□ -1.6
MCM3-201ENST00000229854 PLAC4Q8WY50 150 aa5.05□□□□□ -1.6
MCM3-201ENST00000229854 M0QZ58 72 aa5.04□□□□□ -1.6
MCM3-201ENST00000229854 Q5VSD8 79 aa5.04□□□□□ -1.6
MCM3-201ENST00000229854 MYCBP2O75592 4640 aa5.01□□□□□ -1.61
MCM3-201ENST00000229854 MT1HL1P0DM35 61 aa4.99□□□□□ -1.61
MCM3-201ENST00000229854 LPAP08519 4548 aa4.95□□□□□ -1.62
MCM3-201ENST00000229854 KIAA1109Q2LD37 5005 aa4.94□□□□□ -1.62
MCM3-201ENST00000229854 R4GN34 69 aa4.93□□□□□ -1.62
MCM3-201ENST00000229854 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
MCM3-201ENST00000229854 LRP2P98164 4655 aa4.87□□□□□ -1.63
MCM3-201ENST00000229854 ABCA13Q86UQ4 5058 aa4.85□□□□□ -1.63
MCM3-201ENST00000229854 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
MCM3-201ENST00000229854 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
MCM3-201ENST00000229854 CAMK2N1Q7Z7J9 78 aa4.77□□□□□ -1.65
MCM3-201ENST00000229854 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
MCM3-201ENST00000229854 KRTAP4-5Q9BYR2 181 aa4.73□□□□□ -1.65
MCM3-201ENST00000229854 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
MCM3-201ENST00000229854 KRTAP4-1Q9BYQ7 146 aa4.63□□□□□ -1.67
MCM3-201ENST00000229854 SEC61BP60468 96 aaKnown RBP4.6□□□□□ -1.67
MCM3-201ENST00000229854 HERC2O95714 4834 aa4.6□□□□□ -1.67
MCM3-201ENST00000229854 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
MCM3-201ENST00000229854 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
MCM3-201ENST00000229854 TNP1P09430 55 aa4.57□□□□□ -1.68
MCM3-201ENST00000229854 SPRR5A0A1B0GTR4 108 aa4.51□□□□□ -1.69
MCM3-201ENST00000229854 J3QL48 77 aa4.46□□□□□ -1.7
MCM3-201ENST00000229854 MUC2Q02817 5179 aa4.45□□□□□ -1.7
MCM3-201ENST00000229854 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
MCM3-201ENST00000229854 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
MCM3-201ENST00000229854 HERC1Q15751 4861 aa4.42□□□□□ -1.7
MCM3-201ENST00000229854 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
MCM3-201ENST00000229854 PCLOQ9Y6V0 5065 aa4.39□□□□□ -1.71
MCM3-201ENST00000229854 LCE2CQ5TA81 110 aa4.33□□□□□ -1.72
MCM3-201ENST00000229854 INE1O15225 51 aa4.31□□□□□ -1.72
MCM3-201ENST00000229854 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
MCM3-201ENST00000229854 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
MCM3-201ENST00000229854 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
MCM3-201ENST00000229854 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
MCM3-201ENST00000229854 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
MCM3-201ENST00000229854 MT1HP80294 61 aa4.17□□□□□ -1.74
MCM3-201ENST00000229854 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.74
MCM3-201ENST00000229854 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
MCM3-201ENST00000229854 MT2AP02795 61 aa4.09□□□□□ -1.75
MCM3-201ENST00000229854 MT1FP04733 61 aa4.09□□□□□ -1.75
MCM3-201ENST00000229854 KRTAP8-1Q8IUC2 63 aa4.09□□□□□ -1.75
MCM3-201ENST00000229854 M0R2T5 61 aa4.06□□□□□ -1.76
MCM3-201ENST00000229854 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
MCM3-201ENST00000229854 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
MCM3-201ENST00000229854 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
MCM3-201ENST00000229854 KRTAP10-12P60413 245 aa3.98□□□□□ -1.77
MCM3-201ENST00000229854 MT1BP07438 61 aa3.97□□□□□ -1.77
MCM3-201ENST00000229854 KRTAP10-5P60370 271 aa3.95□□□□□ -1.78
MCM3-201ENST00000229854 MT1XP80297 61 aa3.94□□□□□ -1.78
MCM3-201ENST00000229854 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
MCM3-201ENST00000229854 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
MCM3-201ENST00000229854 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
MCM3-201ENST00000229854 KMT2DO14686 5537 aa3.77□□□□□ -1.81
MCM3-201ENST00000229854 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
MCM3-201ENST00000229854 FSIP2Q5CZC0 6907 aa3.76□□□□□ -1.81
MCM3-201ENST00000229854 LCE2BO14633 110 aa3.75□□□□□ -1.81
MCM3-201ENST00000229854 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
MCM3-201ENST00000229854 USH2AO75445 5202 aa3.74□□□□□ -1.81
MCM3-201ENST00000229854 KRTAP9-6A8MVA2 160 aa3.71□□□□□ -1.82
MCM3-201ENST00000229854 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
MCM3-201ENST00000229854 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
MCM3-201ENST00000229854 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
MCM3-201ENST00000229854 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
MCM3-201ENST00000229854 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.83
MCM3-201ENST00000229854 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
MCM3-201ENST00000229854 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
MCM3-201ENST00000229854 KRTAP19-7Q3SYF9 63 aa3.52□□□□□ -1.85
MCM3-201ENST00000229854 LCE2DQ5TA82 110 aaPredicted RBP3.5□□□□□ -1.85
MCM3-201ENST00000229854 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
MCM3-201ENST00000229854 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
MCM3-201ENST00000229854 KRTAP12-4P60329 112 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms