RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 KRTAP10-6P60371 365 aaPredicted RBP9.51□□□□□ -0.89
CACTIN-201ENST00000221899 A0A0D9SG42 100 aa9.51□□□□□ -0.89
CACTIN-201ENST00000221899 KRTAP10-8P60410 259 aa9.5□□□□□ -0.89
CACTIN-201ENST00000221899 KRTAP13-4Q3LI77 160 aa9.5□□□□□ -0.89
CACTIN-201ENST00000221899 RYR2Q92736 4967 aa9.5□□□□□ -0.89
CACTIN-201ENST00000221899 HSPG2P98160 4391 aa9.49□□□□□ -0.89
CACTIN-201ENST00000221899 TNXBP22105 4242 aa9.46□□□□□ -0.89
CACTIN-201ENST00000221899 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.9
CACTIN-201ENST00000221899 XP32Q5T750 250 aa9.43□□□□□ -0.9
CACTIN-201ENST00000221899 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
CACTIN-201ENST00000221899 S4R3F8 94 aa9.42□□□□□ -0.9
CACTIN-201ENST00000221899 MYCBP2O75592 4640 aa9.42□□□□□ -0.9
CACTIN-201ENST00000221899 KMT2CQ8NEZ4 4911 aaKnown RBP9.42□□□□□ -0.9
CACTIN-201ENST00000221899 ROMO1P60602 79 aa9.4□□□□□ -0.9
CACTIN-201ENST00000221899 Q5VSD8 79 aa9.39□□□□□ -0.91
CACTIN-201ENST00000221899 P0C880 135 aa9.36□□□□□ -0.91
CACTIN-201ENST00000221899 KRTAP17-1Q9BYP8 105 aa9.24□□□□□ -0.93
CACTIN-201ENST00000221899 TPRXLQ17RH7 258 aa9.23□□□□□ -0.93
CACTIN-201ENST00000221899 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
CACTIN-201ENST00000221899 KRTAP12-2P59991 146 aa9.2□□□□□ -0.94
CACTIN-201ENST00000221899 LPAP08519 4548 aa9.18□□□□□ -0.94
CACTIN-201ENST00000221899 RYR1P21817 5038 aa9.15□□□□□ -0.95
CACTIN-201ENST00000221899 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
CACTIN-201ENST00000221899 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
CACTIN-201ENST00000221899 KRTAP12-1P59990 96 aa9.08□□□□□ -0.96
CACTIN-201ENST00000221899 KIAA1109Q2LD37 5005 aa9.08□□□□□ -0.96
CACTIN-201ENST00000221899 LRP2P98164 4655 aa9.07□□□□□ -0.96
CACTIN-201ENST00000221899 RYR3Q15413 4870 aa9.06□□□□□ -0.96
CACTIN-201ENST00000221899 M0QZ58 72 aa8.93□□□□□ -0.98
CACTIN-201ENST00000221899 ABCA13Q86UQ4 5058 aa8.87□□□□□ -0.99
CACTIN-201ENST00000221899 KRTAP15-1Q3LI76 137 aa8.81□□□□□ -1
CACTIN-201ENST00000221899 R4GN34 69 aa8.78□□□□□ -1
CACTIN-201ENST00000221899 EPPK1P58107 5090 aaKnown RBP8.76□□□□□ -1.01
CACTIN-201ENST00000221899 NDUFAF8A1L188 74 aa8.74□□□□□ -1.01
CACTIN-201ENST00000221899 LORP23490 312 aaPredicted RBP8.71□□□□□ -1.01
CACTIN-201ENST00000221899 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.01
CACTIN-201ENST00000221899 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
CACTIN-201ENST00000221899 SEC61BP60468 96 aaKnown RBP8.6□□□□□ -1.03
CACTIN-201ENST00000221899 MUC17Q685J3 4493 aa8.59□□□□□ -1.03
CACTIN-201ENST00000221899 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
CACTIN-201ENST00000221899 J3QL48 77 aa8.41□□□□□ -1.06
CACTIN-201ENST00000221899 KRTAP19-2Q3LHN2 52 aa8.39□□□□□ -1.07
CACTIN-201ENST00000221899 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
CACTIN-201ENST00000221899 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
CACTIN-201ENST00000221899 MUC2Q02817 5179 aa8.35□□□□□ -1.07
CACTIN-201ENST00000221899 HERC2O95714 4834 aa8.26□□□□□ -1.09
CACTIN-201ENST00000221899 PP632Q6XCG6 107 aa8.17□□□□□ -1.1
CACTIN-201ENST00000221899 FLGP20930 4061 aaPredicted RBP8.13□□□□□ -1.11
CACTIN-201ENST00000221899 PCLOQ9Y6V0 5065 aa8.06□□□□□ -1.12
CACTIN-201ENST00000221899 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
CACTIN-201ENST00000221899 TNP1P09430 55 aa8.02□□□□□ -1.13
CACTIN-201ENST00000221899 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
CACTIN-201ENST00000221899 HERC1Q15751 4861 aa7.92□□□□□ -1.14
CACTIN-201ENST00000221899 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
CACTIN-201ENST00000221899 LCE2CQ5TA81 110 aa7.84□□□□□ -1.15
CACTIN-201ENST00000221899 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
CACTIN-201ENST00000221899 KRTAP23-1A1A580 65 aa7.79□□□□□ -1.16
CACTIN-201ENST00000221899 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
CACTIN-201ENST00000221899 M0R2T5 61 aa7.77□□□□□ -1.17
CACTIN-201ENST00000221899 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
CACTIN-201ENST00000221899 SPRR5A0A1B0GTR4 108 aa7.7□□□□□ -1.18
CACTIN-201ENST00000221899 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
CACTIN-201ENST00000221899 LCE3AQ5TA76 89 aa7.64□□□□□ -1.19
CACTIN-201ENST00000221899 MT1HP80294 61 aa7.63□□□□□ -1.19
CACTIN-201ENST00000221899 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
CACTIN-201ENST00000221899 MT1FP04733 61 aa7.59□□□□□ -1.19
CACTIN-201ENST00000221899 UBR4Q5T4S7 5183 aa7.57□□□□□ -1.2
CACTIN-201ENST00000221899 MT2AP02795 61 aa7.56□□□□□ -1.2
CACTIN-201ENST00000221899 KRTAP9-8Q9BYQ0 159 aa7.47□□□□□ -1.21
CACTIN-201ENST00000221899 KRTAP19-8Q3LI54 63 aa7.37□□□□□ -1.23
CACTIN-201ENST00000221899 KRTAP10-5P60370 271 aa7.36□□□□□ -1.23
CACTIN-201ENST00000221899 MT1BP07438 61 aa7.35□□□□□ -1.23
CACTIN-201ENST00000221899 KRTAP8-1Q8IUC2 63 aa7.35□□□□□ -1.23
CACTIN-201ENST00000221899 MT1XP80297 61 aa7.34□□□□□ -1.23
CACTIN-201ENST00000221899 KRTAP10-12P60413 245 aa7.25□□□□□ -1.25
CACTIN-201ENST00000221899 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
CACTIN-201ENST00000221899 KRTAP10-7P60409 375 aaPredicted RBP7.2□□□□□ -1.26
CACTIN-201ENST00000221899 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
CACTIN-201ENST00000221899 PRO2289Q9P1D8 64 aa6.98□□□□□ -1.29
CACTIN-201ENST00000221899 KRTAP19-5Q3LI72 72 aa6.91□□□□□ -1.3
CACTIN-201ENST00000221899 USH2AO75445 5202 aa6.91□□□□□ -1.3
CACTIN-201ENST00000221899 KMT2DO14686 5537 aa6.89□□□□□ -1.31
CACTIN-201ENST00000221899 LCE2BO14633 110 aa6.87□□□□□ -1.31
CACTIN-201ENST00000221899 INE1O15225 51 aa6.86□□□□□ -1.31
CACTIN-201ENST00000221899 LCE3CQ5T5A8 94 aa6.8□□□□□ -1.32
CACTIN-201ENST00000221899 KRTAP4-8A0A0G2JLE6 195 aa6.77□□□□□ -1.33
CACTIN-201ENST00000221899 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
CACTIN-201ENST00000221899 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
CACTIN-201ENST00000221899 KRTAP4-7Q9BYR0 210 aa6.58□□□□□ -1.36
CACTIN-201ENST00000221899 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
CACTIN-201ENST00000221899 LCE2AQ5TA79 106 aaPredicted RBP6.53□□□□□ -1.36
CACTIN-201ENST00000221899 KRTAP2-3P0C7H8 128 aa6.35□□□□□ -1.39
CACTIN-201ENST00000221899 KRTAP2-4Q9BYR9 128 aa6.35□□□□□ -1.39
CACTIN-201ENST00000221899 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
CACTIN-201ENST00000221899 MT1LQ93083 61 aa6.35□□□□□ -1.39
CACTIN-201ENST00000221899 MT1EP04732 61 aa6.32□□□□□ -1.4
CACTIN-201ENST00000221899 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
CACTIN-201ENST00000221899 FSIP2Q5CZC0 6907 aa6.19□□□□□ -1.42
CACTIN-201ENST00000221899 LCE2DQ5TA82 110 aaPredicted RBP6.17□□□□□ -1.42
CACTIN-201ENST00000221899 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms