RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 CSAG1Q6PB30 78 aa11.19□□□□□ -0.62
HOMER3-201ENST00000221222 KRTAP3-3Q9BYR6 98 aa11.19□□□□□ -0.62
HOMER3-201ENST00000221222 MT1FP04733 61 aa11.18□□□□□ -0.62
HOMER3-201ENST00000221222 DMAC1Q96GE9 116 aa11.18□□□□□ -0.62
HOMER3-201ENST00000221222 USH2AO75445 5202 aa11.17□□□□□ -0.62
HOMER3-201ENST00000221222 COX7CP15954 63 aa11.16□□□□□ -0.62
HOMER3-201ENST00000221222 KRTAP10-10P60014 251 aa11.13□□□□□ -0.63
HOMER3-201ENST00000221222 SSPOA2VEC9 5147 aa11.12□□□□□ -0.63
HOMER3-201ENST00000221222 NDUFC1O43677 76 aa11.07□□□□□ -0.64
HOMER3-201ENST00000221222 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
HOMER3-201ENST00000221222 ANAPC13Q9BS18 74 aa11.04□□□□□ -0.64
HOMER3-201ENST00000221222 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.03□□□□□ -0.64
HOMER3-201ENST00000221222 ACYP2P14621 99 aa11.01□□□□□ -0.65
HOMER3-201ENST00000221222 KRTAP9-3Q9BYQ3 159 aa11.01□□□□□ -0.65
HOMER3-201ENST00000221222 KRTAP9-7A8MTY7 169 aa10.96□□□□□ -0.65
HOMER3-201ENST00000221222 LCE2BO14633 110 aa10.93□□□□□ -0.66
HOMER3-201ENST00000221222 FCGBPQ9Y6R7 5405 aaPredicted RBP10.89□□□□□ -0.67
HOMER3-201ENST00000221222 H0YAA0 97 aa10.89□□□□□ -0.67
HOMER3-201ENST00000221222 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
HOMER3-201ENST00000221222 H7BZZ5 65 aa10.88□□□□□ -0.67
HOMER3-201ENST00000221222 KRTAP19-1Q8IUB9 90 aa10.86□□□□□ -0.67
HOMER3-201ENST00000221222 CCDC179H3BU77 68 aa10.8□□□□□ -0.68
HOMER3-201ENST00000221222 CHKB-CPT1BH3BT56 60 aa10.77□□□□□ -0.68
HOMER3-201ENST00000221222 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
HOMER3-201ENST00000221222 ADM2Q7Z4H4 148 aa10.73□□□□□ -0.69
HOMER3-201ENST00000221222 CRIPTQ9P021 101 aa10.68□□□□□ -0.7
HOMER3-201ENST00000221222 COA5Q86WW8 74 aa10.66□□□□□ -0.7
HOMER3-201ENST00000221222 SPRR2GQ9BYE4 73 aa10.66□□□□□ -0.7
HOMER3-201ENST00000221222 KRTAP3-2Q9BYR7 98 aa10.59□□□□□ -0.71
HOMER3-201ENST00000221222 P0C880 135 aa10.57□□□□□ -0.72
HOMER3-201ENST00000221222 KRTAP19-6Q3LI70 58 aa10.54□□□□□ -0.72
HOMER3-201ENST00000221222 ATP5EP56381 51 aaPredicted RBP10.52□□□□□ -0.72
HOMER3-201ENST00000221222 KRTAP19-8Q3LI54 63 aa10.51□□□□□ -0.73
HOMER3-201ENST00000221222 MACF1Q9UPN3 7388 aaKnown RBP10.5□□□□□ -0.73
HOMER3-201ENST00000221222 TMEM258P61165 79 aa10.45□□□□□ -0.74
HOMER3-201ENST00000221222 SYNE2Q8WXH0 6885 aaKnown RBP10.44□□□□□ -0.74
HOMER3-201ENST00000221222 Q5VV11 94 aa10.43□□□□□ -0.74
HOMER3-201ENST00000221222 MT1BP07438 61 aa10.41□□□□□ -0.74
HOMER3-201ENST00000221222 R4GN34 69 aa10.41□□□□□ -0.74
HOMER3-201ENST00000221222 M0QZ58 72 aa10.36□□□□□ -0.75
HOMER3-201ENST00000221222 SEC61GP60059 68 aa10.26□□□□□ -0.77
HOMER3-201ENST00000221222 SERP1Q9Y6X1 66 aa10.23□□□□□ -0.77
HOMER3-201ENST00000221222 KRTAP6-3Q3LI67 103 aa10.18□□□□□ -0.78
HOMER3-201ENST00000221222 PCP4P48539 62 aa10.16□□□□□ -0.78
HOMER3-201ENST00000221222 LINC01554Q52M75 96 aa10.15□□□□□ -0.78
HOMER3-201ENST00000221222 A0A1B0GU69 56 aa10.11□□□□□ -0.79
HOMER3-201ENST00000221222 KRTAP13-4Q3LI77 160 aa10.11□□□□□ -0.79
HOMER3-201ENST00000221222 PLAC4Q8WY50 150 aa10.1□□□□□ -0.79
HOMER3-201ENST00000221222 KRTAP10-5P60370 271 aa10.07□□□□□ -0.8
HOMER3-201ENST00000221222 A6NN06 94 aa10.06□□□□□ -0.8
HOMER3-201ENST00000221222 A0A1B0GU33 70 aa10.05□□□□□ -0.8
HOMER3-201ENST00000221222 LINC01558Q9Y6Z2 57 aa10.02□□□□□ -0.8
HOMER3-201ENST00000221222 PRR15LQ9BU68 103 aa9.97□□□□□ -0.81
HOMER3-201ENST00000221222 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
HOMER3-201ENST00000221222 MT1XP80297 61 aa9.9□□□□□ -0.82
HOMER3-201ENST00000221222 PRO2289Q9P1D8 64 aa9.89□□□□□ -0.83
HOMER3-201ENST00000221222 NEBP20929 6669 aa9.85□□□□□ -0.83
HOMER3-201ENST00000221222 A0A0D9SG42 100 aa9.82□□□□□ -0.84
HOMER3-201ENST00000221222 MUC12Q9UKN1 5478 aa9.81□□□□□ -0.84
HOMER3-201ENST00000221222 V9GYY9 64 aa9.77□□□□□ -0.84
HOMER3-201ENST00000221222 SMIM26A0A096LP01 95 aa9.76□□□□□ -0.85
HOMER3-201ENST00000221222 RPS28P62857 69 aaKnown RBP9.75□□□□□ -0.85
HOMER3-201ENST00000221222 Q1T7F1 81 aa9.75□□□□□ -0.85
HOMER3-201ENST00000221222 A8MU10 97 aa9.67□□□□□ -0.86
HOMER3-201ENST00000221222 KRTAP12-1P59990 96 aa9.67□□□□□ -0.86
HOMER3-201ENST00000221222 UQCR11O14957 56 aa9.66□□□□□ -0.86
HOMER3-201ENST00000221222 CAMK2N1Q7Z7J9 78 aa9.65□□□□□ -0.86
HOMER3-201ENST00000221222 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
HOMER3-201ENST00000221222 KRTAP12-2P59991 146 aa9.61□□□□□ -0.87
HOMER3-201ENST00000221222 PSPHP1O15172 72 aa9.6□□□□□ -0.87
HOMER3-201ENST00000221222 KRTAP20-1Q3LI63 56 aa9.6□□□□□ -0.87
HOMER3-201ENST00000221222 KRTAP5-9P26371 169 aa9.59□□□□□ -0.87
HOMER3-201ENST00000221222 KMT2DO14686 5537 aa9.57□□□□□ -0.88
HOMER3-201ENST00000221222 MDN1Q9NU22 5596 aa9.52□□□□□ -0.88
HOMER3-201ENST00000221222 MIR22HGQ0VDD5 57 aa9.48□□□□□ -0.89
HOMER3-201ENST00000221222 KRTAP10-7P60409 375 aaPredicted RBP9.45□□□□□ -0.9
HOMER3-201ENST00000221222 KRTAP10-12P60413 245 aa9.42□□□□□ -0.9
HOMER3-201ENST00000221222 SPRR2FQ96RM1 72 aa9.33□□□□□ -0.92
HOMER3-201ENST00000221222 A6NED7 52 aa9.31□□□□□ -0.92
HOMER3-201ENST00000221222 KRTAP4-8A0A0G2JLE6 195 aa9.27□□□□□ -0.93
HOMER3-201ENST00000221222 KRTAP4-8Q9BYQ9 185 aa9.27□□□□□ -0.93
HOMER3-201ENST00000221222 SPRR2EP22531 72 aa9.26□□□□□ -0.93
HOMER3-201ENST00000221222 SPRR2BP35325 72 aa9.26□□□□□ -0.93
HOMER3-201ENST00000221222 SPRR2AP35326 72 aa9.26□□□□□ -0.93
HOMER3-201ENST00000221222 KRTAP8-1Q8IUC2 63 aa9.25□□□□□ -0.93
HOMER3-201ENST00000221222 KRTAP2-3P0C7H8 128 aa9.24□□□□□ -0.93
HOMER3-201ENST00000221222 KRTAP2-4Q9BYR9 128 aa9.24□□□□□ -0.93
HOMER3-201ENST00000221222 C10orf95Q9H7T3 257 aa9.21□□□□□ -0.94
HOMER3-201ENST00000221222 K7ERS5 55 aa9.19□□□□□ -0.94
HOMER3-201ENST00000221222 TNP1P09430 55 aa9.06□□□□□ -0.96
HOMER3-201ENST00000221222 LCE1AQ5T7P2 110 aa9.06□□□□□ -0.96
HOMER3-201ENST00000221222 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
HOMER3-201ENST00000221222 SPRR2DP22532 72 aa8.95□□□□□ -0.98
HOMER3-201ENST00000221222 KRTAP2-2Q9BYT5 123 aa8.93□□□□□ -0.98
HOMER3-201ENST00000221222 KRTAP2-1Q9BYU5 128 aa8.93□□□□□ -0.98
HOMER3-201ENST00000221222 KRTAP25-1Q3LHN0 102 aa8.85□□□□□ -0.99
HOMER3-201ENST00000221222 KRTAP19-7Q3SYF9 63 aa8.85□□□□□ -0.99
HOMER3-201ENST00000221222 LCE3AQ5TA76 89 aa8.83□□□□□ -1
HOMER3-201ENST00000221222 KRTAP19-5Q3LI72 72 aa8.74□□□□□ -1.01
HOMER3-201ENST00000221222 MT1EP04732 61 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms