RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
USP11-201ENST00000218348 IGKV2D-30A0A075B6S6 120 aa5.61□□□□□ -1.51
USP11-201ENST00000218348 IGKV2-30P06310 120 aa5.61□□□□□ -1.51
USP11-201ENST00000218348 A8MUU9 505 aa5.6□□□□□ -1.51
USP11-201ENST00000218348 Q5VSD8 79 aa5.58□□□□□ -1.52
USP11-201ENST00000218348 SPINK1P00995 79 aa5.58□□□□□ -1.52
USP11-201ENST00000218348 UQCR11O14957 56 aa5.57□□□□□ -1.52
USP11-201ENST00000218348 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
USP11-201ENST00000218348 KRTAP13-3Q3SY46 172 aa5.53□□□□□ -1.52
USP11-201ENST00000218348 FAM229AH3BQW9 127 aa5.53□□□□□ -1.52
USP11-201ENST00000218348 HERC1Q15751 4861 aa5.52□□□□□ -1.53
USP11-201ENST00000218348 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
USP11-201ENST00000218348 MT1HL1P0DM35 61 aa5.5□□□□□ -1.53
USP11-201ENST00000218348 LUZP6Q538Z0 58 aa5.47□□□□□ -1.53
USP11-201ENST00000218348 HMCN2Q8NDA2 5059 aa5.46□□□□□ -1.54
USP11-201ENST00000218348 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
USP11-201ENST00000218348 ACYP2P14621 99 aa5.43□□□□□ -1.54
USP11-201ENST00000218348 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
USP11-201ENST00000218348 RPS29P62273 56 aaKnown RBP5.35□□□□□ -1.55
USP11-201ENST00000218348 LPAP08519 4548 aa5.35□□□□□ -1.55
USP11-201ENST00000218348 J3QL48 77 aa5.29□□□□□ -1.56
USP11-201ENST00000218348 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
USP11-201ENST00000218348 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
USP11-201ENST00000218348 H0YAA0 97 aa5.27□□□□□ -1.57
USP11-201ENST00000218348 K7ERS5 55 aa5.27□□□□□ -1.57
USP11-201ENST00000218348 KRTAP3-1Q9BYR8 98 aa5.25□□□□□ -1.57
USP11-201ENST00000218348 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
USP11-201ENST00000218348 LRP2P98164 4655 aa5.25□□□□□ -1.57
USP11-201ENST00000218348 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
USP11-201ENST00000218348 XP32Q5T750 250 aa5.22□□□□□ -1.57
USP11-201ENST00000218348 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
USP11-201ENST00000218348 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
USP11-201ENST00000218348 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
USP11-201ENST00000218348 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
USP11-201ENST00000218348 MUC2Q02817 5179 aa5.11□□□□□ -1.59
USP11-201ENST00000218348 RNF213Q63HN8 5207 aa5.11□□□□□ -1.59
USP11-201ENST00000218348 A0A1B0GU33 70 aa5.11□□□□□ -1.59
USP11-201ENST00000218348 S4R3F8 94 aa5.02□□□□□ -1.61
USP11-201ENST00000218348 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
USP11-201ENST00000218348 KRTAP3-3Q9BYR6 98 aa5.01□□□□□ -1.61
USP11-201ENST00000218348 A0A0D9SG42 100 aa5□□□□□ -1.61
USP11-201ENST00000218348 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
USP11-201ENST00000218348 FLGP20930 4061 aaPredicted RBP4.94□□□□□ -1.62
USP11-201ENST00000218348 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
USP11-201ENST00000218348 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
USP11-201ENST00000218348 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
USP11-201ENST00000218348 KRTAP3-2Q9BYR7 98 aa4.89□□□□□ -1.63
USP11-201ENST00000218348 FAT4Q6V0I7 4981 aa4.88□□□□□ -1.63
USP11-201ENST00000218348 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
USP11-201ENST00000218348 PLAC4Q8WY50 150 aa4.75□□□□□ -1.65
USP11-201ENST00000218348 M0QZ58 72 aa4.74□□□□□ -1.65
USP11-201ENST00000218348 LORP23490 312 aaPredicted RBP4.74□□□□□ -1.65
USP11-201ENST00000218348 KRTAP12-2P59991 146 aa4.73□□□□□ -1.65
USP11-201ENST00000218348 R4GN34 69 aa4.71□□□□□ -1.66
USP11-201ENST00000218348 CAMK2N1Q7Z7J9 78 aa4.71□□□□□ -1.66
USP11-201ENST00000218348 LCE2AQ5TA79 106 aaPredicted RBP4.69□□□□□ -1.66
USP11-201ENST00000218348 KRTAP12-1P59990 96 aa4.66□□□□□ -1.66
USP11-201ENST00000218348 MT1HP80294 61 aa4.63□□□□□ -1.67
USP11-201ENST00000218348 M0R2T5 61 aa4.59□□□□□ -1.67
USP11-201ENST00000218348 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
USP11-201ENST00000218348 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
USP11-201ENST00000218348 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
USP11-201ENST00000218348 MT2AP02795 61 aa4.38□□□□□ -1.71
USP11-201ENST00000218348 MT1FP04733 61 aa4.37□□□□□ -1.71
USP11-201ENST00000218348 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
USP11-201ENST00000218348 USH2AO75445 5202 aa4.31□□□□□ -1.72
USP11-201ENST00000218348 LCE2DQ5TA82 110 aaPredicted RBP4.29□□□□□ -1.72
USP11-201ENST00000218348 KRTAP19-1Q8IUB9 90 aa4.29□□□□□ -1.72
USP11-201ENST00000218348 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
USP11-201ENST00000218348 LCE2BO14633 110 aa4.24□□□□□ -1.73
USP11-201ENST00000218348 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
USP11-201ENST00000218348 SPRR2GQ9BYE4 73 aa4.22□□□□□ -1.73
USP11-201ENST00000218348 TNP1P09430 55 aa4.2□□□□□ -1.74
USP11-201ENST00000218348 INE1O15225 51 aa4.19□□□□□ -1.74
USP11-201ENST00000218348 KRTAP9-2Q9BYQ4 174 aa4.18□□□□□ -1.74
USP11-201ENST00000218348 FSIP2Q5CZC0 6907 aa4.17□□□□□ -1.74
USP11-201ENST00000218348 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
USP11-201ENST00000218348 MT1BP07438 61 aa4.12□□□□□ -1.75
USP11-201ENST00000218348 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
USP11-201ENST00000218348 KMT2DO14686 5537 aa4.09□□□□□ -1.76
USP11-201ENST00000218348 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
USP11-201ENST00000218348 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
USP11-201ENST00000218348 FCGBPQ9Y6R7 5405 aaPredicted RBP4.03□□□□□ -1.76
USP11-201ENST00000218348 MT1XP80297 61 aa4.03□□□□□ -1.76
USP11-201ENST00000218348 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
USP11-201ENST00000218348 KRTAP19-6Q3LI70 58 aa4.01□□□□□ -1.77
USP11-201ENST00000218348 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
USP11-201ENST00000218348 CRCT1Q9UGL9 99 aa3.96□□□□□ -1.77
USP11-201ENST00000218348 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
USP11-201ENST00000218348 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
USP11-201ENST00000218348 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
USP11-201ENST00000218348 KRTAP4-8Q9BYQ9 185 aa3.85□□□□□ -1.79
USP11-201ENST00000218348 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
USP11-201ENST00000218348 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
USP11-201ENST00000218348 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
USP11-201ENST00000218348 KRTAP19-5Q3LI72 72 aa3.77□□□□□ -1.81
USP11-201ENST00000218348 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
USP11-201ENST00000218348 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
USP11-201ENST00000218348 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
USP11-201ENST00000218348 KRTAP4-7Q9BYR0 210 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms