RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 S4R3F8 94 aa7.87□□□□□ -1.15
SNRPD3-201ENST00000215829 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
SNRPD3-201ENST00000215829 LCA10Q71F78 164 aa7.84□□□□□ -1.15
SNRPD3-201ENST00000215829 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
SNRPD3-201ENST00000215829 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
SNRPD3-201ENST00000215829 LCE2DQ5TA82 110 aaPredicted RBP7.81□□□□□ -1.16
SNRPD3-201ENST00000215829 FLGP20930 4061 aaPredicted RBP7.8□□□□□ -1.16
SNRPD3-201ENST00000215829 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
SNRPD3-201ENST00000215829 FAT4Q6V0I7 4981 aa7.76□□□□□ -1.17
SNRPD3-201ENST00000215829 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
SNRPD3-201ENST00000215829 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
SNRPD3-201ENST00000215829 MT1HP80294 61 aa7.69□□□□□ -1.18
SNRPD3-201ENST00000215829 M0R2T5 61 aa7.61□□□□□ -1.19
SNRPD3-201ENST00000215829 Q1T7F1 81 aa7.6□□□□□ -1.19
SNRPD3-201ENST00000215829 LINC01558Q9Y6Z2 57 aa7.6□□□□□ -1.19
SNRPD3-201ENST00000215829 V9GYY9 64 aa7.59□□□□□ -1.2
SNRPD3-201ENST00000215829 H0YAA0 97 aa7.54□□□□□ -1.2
SNRPD3-201ENST00000215829 SEC61GP60059 68 aa7.53□□□□□ -1.2
SNRPD3-201ENST00000215829 A0A1B0GU69 56 aa7.52□□□□□ -1.21
SNRPD3-201ENST00000215829 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
SNRPD3-201ENST00000215829 ADM2Q7Z4H4 148 aa7.5□□□□□ -1.21
SNRPD3-201ENST00000215829 PRR15LQ9BU68 103 aa7.48□□□□□ -1.21
SNRPD3-201ENST00000215829 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.21
SNRPD3-201ENST00000215829 PSPHP1O15172 72 aa7.46□□□□□ -1.22
SNRPD3-201ENST00000215829 P0C880 135 aa7.43□□□□□ -1.22
SNRPD3-201ENST00000215829 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.23
SNRPD3-201ENST00000215829 KRTAP9-8Q9BYQ0 159 aa7.4□□□□□ -1.23
SNRPD3-201ENST00000215829 Q5VV11 94 aa7.39□□□□□ -1.23
SNRPD3-201ENST00000215829 MT2AP02795 61 aa7.36□□□□□ -1.23
SNRPD3-201ENST00000215829 A0A1B0GU33 70 aa7.35□□□□□ -1.23
SNRPD3-201ENST00000215829 MT1FP04733 61 aa7.31□□□□□ -1.24
SNRPD3-201ENST00000215829 KRTAP10-10P60014 251 aa7.3□□□□□ -1.24
SNRPD3-201ENST00000215829 UQCR11O14957 56 aa7.27□□□□□ -1.25
SNRPD3-201ENST00000215829 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
SNRPD3-201ENST00000215829 M0QZ58 72 aa7.25□□□□□ -1.25
SNRPD3-201ENST00000215829 R4GN34 69 aa7.25□□□□□ -1.25
SNRPD3-201ENST00000215829 A6NED7 52 aa7.23□□□□□ -1.25
SNRPD3-201ENST00000215829 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
SNRPD3-201ENST00000215829 SPATA8Q6RVD6 105 aa7.22□□□□□ -1.25
SNRPD3-201ENST00000215829 MIR22HGQ0VDD5 57 aa7.18□□□□□ -1.26
SNRPD3-201ENST00000215829 SPRR2GQ9BYE4 73 aa7.15□□□□□ -1.27
SNRPD3-201ENST00000215829 KRTAP9-3Q9BYQ3 159 aa7.14□□□□□ -1.27
SNRPD3-201ENST00000215829 KRTAP19-1Q8IUB9 90 aa7.13□□□□□ -1.27
SNRPD3-201ENST00000215829 PRO0628Q9UI54 55 aa7.13□□□□□ -1.27
SNRPD3-201ENST00000215829 A8MU10 97 aa7.1□□□□□ -1.27
SNRPD3-201ENST00000215829 LINC01554Q52M75 96 aa7.09□□□□□ -1.27
SNRPD3-201ENST00000215829 A0A0D9SG42 100 aa7.08□□□□□ -1.28
SNRPD3-201ENST00000215829 BRK1Q8WUW1 75 aa7.08□□□□□ -1.28
SNRPD3-201ENST00000215829 CDC42SE1Q9NRR8 79 aa7.08□□□□□ -1.28
SNRPD3-201ENST00000215829 A6NN06 94 aa6.98□□□□□ -1.29
SNRPD3-201ENST00000215829 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
SNRPD3-201ENST00000215829 LCE2BO14633 110 aa6.96□□□□□ -1.3
SNRPD3-201ENST00000215829 KRTAP12-1P59990 96 aa6.95□□□□□ -1.3
SNRPD3-201ENST00000215829 SPINT4Q6UDR6 99 aa6.93□□□□□ -1.3
SNRPD3-201ENST00000215829 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
SNRPD3-201ENST00000215829 MT1BP07438 61 aa6.89□□□□□ -1.31
SNRPD3-201ENST00000215829 K7ERS5 55 aa6.87□□□□□ -1.31
SNRPD3-201ENST00000215829 PLAC4Q8WY50 150 aa6.87□□□□□ -1.31
SNRPD3-201ENST00000215829 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
SNRPD3-201ENST00000215829 USH2AO75445 5202 aa6.81□□□□□ -1.32
SNRPD3-201ENST00000215829 KRTAP9-2Q9BYQ4 174 aa6.79□□□□□ -1.32
SNRPD3-201ENST00000215829 H3BS24 57 aa6.77□□□□□ -1.33
SNRPD3-201ENST00000215829 CAMK2N1Q7Z7J9 78 aa6.77□□□□□ -1.33
SNRPD3-201ENST00000215829 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
SNRPD3-201ENST00000215829 SSPOA2VEC9 5147 aa6.67□□□□□ -1.34
SNRPD3-201ENST00000215829 MT1XP80297 61 aa6.64□□□□□ -1.35
SNRPD3-201ENST00000215829 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
SNRPD3-201ENST00000215829 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
SNRPD3-201ENST00000215829 PRO2289Q9P1D8 64 aa6.59□□□□□ -1.35
SNRPD3-201ENST00000215829 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
SNRPD3-201ENST00000215829 ROMO1P60602 79 aa6.57□□□□□ -1.36
SNRPD3-201ENST00000215829 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
SNRPD3-201ENST00000215829 CRCT1Q9UGL9 99 aa6.46□□□□□ -1.37
SNRPD3-201ENST00000215829 TNP1P09430 55 aa6.42□□□□□ -1.38
SNRPD3-201ENST00000215829 FCGBPQ9Y6R7 5405 aaPredicted RBP6.4□□□□□ -1.38
SNRPD3-201ENST00000215829 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.38
SNRPD3-201ENST00000215829 KRTAP9-6A0A140TA67 174 aa6.38□□□□□ -1.39
SNRPD3-201ENST00000215829 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
SNRPD3-201ENST00000215829 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
SNRPD3-201ENST00000215829 PRAC1Q96KF2 57 aa6.23□□□□□ -1.41
SNRPD3-201ENST00000215829 MACF1Q9UPN3 7388 aaKnown RBP6.2□□□□□ -1.42
SNRPD3-201ENST00000215829 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
SNRPD3-201ENST00000215829 LCE3AQ5TA76 89 aa6.16□□□□□ -1.42
SNRPD3-201ENST00000215829 KRTAP4-8A0A0G2JLE6 195 aa6.15□□□□□ -1.43
SNRPD3-201ENST00000215829 PP632Q6XCG6 107 aa6.15□□□□□ -1.43
SNRPD3-201ENST00000215829 KRTAP4-8Q9BYQ9 185 aa6.15□□□□□ -1.43
SNRPD3-201ENST00000215829 KMT2DO14686 5537 aa6.15□□□□□ -1.43
SNRPD3-201ENST00000215829 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.43
SNRPD3-201ENST00000215829 KRTAP8-1Q8IUC2 63 aa6.05□□□□□ -1.44
SNRPD3-201ENST00000215829 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.01□□□□□ -1.45
SNRPD3-201ENST00000215829 KRTAP19-5Q3LI72 72 aa5.96□□□□□ -1.46
SNRPD3-201ENST00000215829 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
SNRPD3-201ENST00000215829 KRTAP19-7Q3SYF9 63 aa5.93□□□□□ -1.46
SNRPD3-201ENST00000215829 MT1EP04732 61 aa5.83□□□□□ -1.48
SNRPD3-201ENST00000215829 SPRR2FQ96RM1 72 aa5.82□□□□□ -1.48
SNRPD3-201ENST00000215829 KRTAP5-9P26371 169 aa5.81□□□□□ -1.48
SNRPD3-201ENST00000215829 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
SNRPD3-201ENST00000215829 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
SNRPD3-201ENST00000215829 KRTAP6-3Q3LI67 103 aa5.78□□□□□ -1.48
SNRPD3-201ENST00000215829 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms