RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
CEACAM1-201ENST00000161559 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
CEACAM1-201ENST00000161559 Q5VSD8 79 aa3.15□□□□□ -1.9
CEACAM1-201ENST00000161559 A8MUU9 505 aa3.15□□□□□ -1.91
CEACAM1-201ENST00000161559 A0A1B0GU33 70 aa3.11□□□□□ -1.91
CEACAM1-201ENST00000161559 KMT2CQ8NEZ4 4911 aaKnown RBP3.11□□□□□ -1.91
CEACAM1-201ENST00000161559 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
CEACAM1-201ENST00000161559 FAT3Q8TDW7 4589 aa3.1□□□□□ -1.91
CEACAM1-201ENST00000161559 A0A1B0GVY2 172 aa3.09□□□□□ -1.91
CEACAM1-201ENST00000161559 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.91
CEACAM1-201ENST00000161559 KRTAP13-4Q3LI77 160 aa3.08□□□□□ -1.92
CEACAM1-201ENST00000161559 COX6B2Q6YFQ2 88 aa3.08□□□□□ -1.92
CEACAM1-201ENST00000161559 A0A0D9SG42 100 aa3.07□□□□□ -1.92
CEACAM1-201ENST00000161559 ROMO1P60602 79 aa3.07□□□□□ -1.92
CEACAM1-201ENST00000161559 P0C880 135 aa3.06□□□□□ -1.92
CEACAM1-201ENST00000161559 TNXBP22105 4242 aa3.06□□□□□ -1.92
CEACAM1-201ENST00000161559 C10orf95Q9H7T3 257 aa3.06□□□□□ -1.92
CEACAM1-201ENST00000161559 LCE3BQ5TA77 95 aa3.04□□□□□ -1.92
CEACAM1-201ENST00000161559 C20orf166-AS1Q96NR2 134 aa3.04□□□□□ -1.92
CEACAM1-201ENST00000161559 RYR1P21817 5038 aa3.03□□□□□ -1.92
CEACAM1-201ENST00000161559 LRP2P98164 4655 aa3.03□□□□□ -1.92
CEACAM1-201ENST00000161559 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
CEACAM1-201ENST00000161559 BIRC6Q9NR09 4857 aa3.03□□□□□ -1.92
CEACAM1-201ENST00000161559 KRTAP10-6P60371 365 aaPredicted RBP3.02□□□□□ -1.93
CEACAM1-201ENST00000161559 TPRXLQ17RH7 258 aa3.02□□□□□ -1.93
CEACAM1-201ENST00000161559 RYR3Q15413 4870 aa3.02□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP10-4P60372 401 aaPredicted RBP3.01□□□□□ -1.93
CEACAM1-201ENST00000161559 RYR2Q92736 4967 aa3□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP4-8Q9BYQ9 185 aa2.98□□□□□ -1.93
CEACAM1-201ENST00000161559 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
CEACAM1-201ENST00000161559 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
CEACAM1-201ENST00000161559 A0A0A0MQY5 61 aa2.96□□□□□ -1.94
CEACAM1-201ENST00000161559 RPS29P62273 56 aaKnown RBP2.96□□□□□ -1.94
CEACAM1-201ENST00000161559 RPL37P61927 97 aaKnown RBP2.95□□□□□ -1.94
CEACAM1-201ENST00000161559 SPINT4Q6UDR6 99 aa2.95□□□□□ -1.94
CEACAM1-201ENST00000161559 KRTAP17-1Q9BYP8 105 aa2.95□□□□□ -1.94
CEACAM1-201ENST00000161559 KIAA1109Q2LD37 5005 aa2.95□□□□□ -1.94
CEACAM1-201ENST00000161559 K7ERS5 55 aa2.94□□□□□ -1.94
CEACAM1-201ENST00000161559 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
CEACAM1-201ENST00000161559 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
CEACAM1-201ENST00000161559 MUC2Q02817 5179 aa2.91□□□□□ -1.94
CEACAM1-201ENST00000161559 S4R3F8 94 aa2.91□□□□□ -1.94
CEACAM1-201ENST00000161559 LCE4AQ5TA78 99 aa2.9□□□□□ -1.94
CEACAM1-201ENST00000161559 KRTAP4-5Q9BYR2 181 aa2.9□□□□□ -1.94
CEACAM1-201ENST00000161559 HERC2O95714 4834 aa2.9□□□□□ -1.95
CEACAM1-201ENST00000161559 KRTAP12-1P59990 96 aa2.89□□□□□ -1.95
CEACAM1-201ENST00000161559 EPPK1P58107 5090 aaKnown RBP2.88□□□□□ -1.95
CEACAM1-201ENST00000161559 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
CEACAM1-201ENST00000161559 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
CEACAM1-201ENST00000161559 SEC61BP60468 96 aaKnown RBP2.86□□□□□ -1.95
CEACAM1-201ENST00000161559 KRTAP19-4Q3LI73 84 aa2.84□□□□□ -1.95
CEACAM1-201ENST00000161559 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
CEACAM1-201ENST00000161559 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
CEACAM1-201ENST00000161559 PCLOQ9Y6V0 5065 aa2.81□□□□□ -1.96
CEACAM1-201ENST00000161559 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
CEACAM1-201ENST00000161559 MUC17Q685J3 4493 aa2.8□□□□□ -1.96
CEACAM1-201ENST00000161559 M0QZ58 72 aa2.77□□□□□ -1.97
CEACAM1-201ENST00000161559 KRTAP9-7A8MTY7 169 aa2.77□□□□□ -1.97
CEACAM1-201ENST00000161559 M0R2T5 61 aa2.76□□□□□ -1.97
CEACAM1-201ENST00000161559 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
CEACAM1-201ENST00000161559 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
CEACAM1-201ENST00000161559 LCE1DQ5T752 114 aa2.73□□□□□ -1.97
CEACAM1-201ENST00000161559 R4GN34 69 aa2.72□□□□□ -1.97
CEACAM1-201ENST00000161559 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
CEACAM1-201ENST00000161559 KRTAP23-1A1A580 65 aa2.7□□□□□ -1.98
CEACAM1-201ENST00000161559 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
CEACAM1-201ENST00000161559 HERC1Q15751 4861 aa2.65□□□□□ -1.98
CEACAM1-201ENST00000161559 FLGP20930 4061 aaPredicted RBP2.64□□□□□ -1.99
CEACAM1-201ENST00000161559 RNF213Q63HN8 5207 aa2.63□□□□□ -1.99
CEACAM1-201ENST00000161559 KRTAP4-7Q9BYR0 210 aa2.61□□□□□ -1.99
CEACAM1-201ENST00000161559 KRTAP19-2Q3LHN2 52 aa2.6□□□□□ -1.99
CEACAM1-201ENST00000161559 CAMK2N1Q7Z7J9 78 aa2.6□□□□□ -1.99
CEACAM1-201ENST00000161559 HMCN2Q8NDA2 5059 aa2.59□□□□□ -1.99
CEACAM1-201ENST00000161559 LCE5AQ5TCM9 118 aa2.59□□□□□ -1.99
CEACAM1-201ENST00000161559 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
CEACAM1-201ENST00000161559 LUZP6Q538Z0 58 aa2.57□□□□□ -2
CEACAM1-201ENST00000161559 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
CEACAM1-201ENST00000161559 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
CEACAM1-201ENST00000161559 UBR4Q5T4S7 5183 aa2.53□□□□□ -2
CEACAM1-201ENST00000161559 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
CEACAM1-201ENST00000161559 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
CEACAM1-201ENST00000161559 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CEACAM1-201ENST00000161559 TNP1P09430 55 aa2.46□□□□□ -2.02
CEACAM1-201ENST00000161559 KMT2DO14686 5537 aa2.44□□□□□ -2.02
CEACAM1-201ENST00000161559 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
CEACAM1-201ENST00000161559 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CEACAM1-201ENST00000161559 USH2AO75445 5202 aa2.43□□□□□ -2.02
CEACAM1-201ENST00000161559 PRO2289Q9P1D8 64 aa2.4□□□□□ -2.03
CEACAM1-201ENST00000161559 MT1HP80294 61 aa2.39□□□□□ -2.03
CEACAM1-201ENST00000161559 MT1FP04733 61 aa2.35□□□□□ -2.03
CEACAM1-201ENST00000161559 SPRR2GQ9BYE4 73 aa2.35□□□□□ -2.03
CEACAM1-201ENST00000161559 MT2AP02795 61 aa2.32□□□□□ -2.04
CEACAM1-201ENST00000161559 KRTAP10-5P60370 271 aa2.3□□□□□ -2.04
CEACAM1-201ENST00000161559 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
CEACAM1-201ENST00000161559 MT1XP80297 61 aa2.29□□□□□ -2.04
CEACAM1-201ENST00000161559 KRTAP9-8Q9BYQ0 159 aa2.29□□□□□ -2.04
CEACAM1-201ENST00000161559 INE1O15225 51 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms