RNA–Protein interactions for RNA: ENST00000055077.7

RFC2-201, Transcript of replication factor C subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC2, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-201ENST00000055077 MUC2Q02817 5179 aa11.56□□□□□ -0.56
RFC2-201ENST00000055077 V9GYY9 64 aa11.55□□□□□ -0.56
RFC2-201ENST00000055077 UBR4Q5T4S7 5183 aa11.54□□□□□ -0.56
RFC2-201ENST00000055077 KRTAP19-2Q3LHN2 52 aa11.53□□□□□ -0.56
RFC2-201ENST00000055077 KRTAP3-3Q9BYR6 98 aa11.5□□□□□ -0.57
RFC2-201ENST00000055077 LINC01558Q9Y6Z2 57 aa11.49□□□□□ -0.57
RFC2-201ENST00000055077 RNF213Q63HN8 5207 aa11.4□□□□□ -0.58
RFC2-201ENST00000055077 PRR15LQ9BU68 103 aa11.38□□□□□ -0.59
RFC2-201ENST00000055077 PSPHP1O15172 72 aa11.36□□□□□ -0.59
RFC2-201ENST00000055077 CSAG1Q6PB30 78 aa11.34□□□□□ -0.59
RFC2-201ENST00000055077 A0A1B0GU69 56 aa11.33□□□□□ -0.6
RFC2-201ENST00000055077 SEC61GP60059 68 aa11.29□□□□□ -0.6
RFC2-201ENST00000055077 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
RFC2-201ENST00000055077 Q5VV11 94 aa11.27□□□□□ -0.61
RFC2-201ENST00000055077 FLGP20930 4061 aaPredicted RBP11.24□□□□□ -0.61
RFC2-201ENST00000055077 FAT4Q6V0I7 4981 aa11.11□□□□□ -0.63
RFC2-201ENST00000055077 H0YAA0 97 aa11.11□□□□□ -0.63
RFC2-201ENST00000055077 KRTAP3-2Q9BYR7 98 aa11.08□□□□□ -0.64
RFC2-201ENST00000055077 MT1HP80294 61 aa11.08□□□□□ -0.64
RFC2-201ENST00000055077 ADM2Q7Z4H4 148 aa11.08□□□□□ -0.64
RFC2-201ENST00000055077 KRTAP10-6P60371 365 aaPredicted RBP11.07□□□□□ -0.64
RFC2-201ENST00000055077 A6NED7 52 aa11.03□□□□□ -0.64
RFC2-201ENST00000055077 A0A1B0GU33 70 aa10.99□□□□□ -0.65
RFC2-201ENST00000055077 P0C880 135 aa10.99□□□□□ -0.65
RFC2-201ENST00000055077 M0R2T5 61 aa10.98□□□□□ -0.65
RFC2-201ENST00000055077 UQCR11O14957 56 aa10.98□□□□□ -0.65
RFC2-201ENST00000055077 BRK1Q8WUW1 75 aa10.88□□□□□ -0.67
RFC2-201ENST00000055077 MIR22HGQ0VDD5 57 aa10.85□□□□□ -0.67
RFC2-201ENST00000055077 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
RFC2-201ENST00000055077 SPATA8Q6RVD6 105 aa10.81□□□□□ -0.68
RFC2-201ENST00000055077 KRTAP13-4Q3LI77 160 aa10.76□□□□□ -0.69
RFC2-201ENST00000055077 A8MU10 97 aa10.74□□□□□ -0.69
RFC2-201ENST00000055077 M0QZ58 72 aa10.73□□□□□ -0.69
RFC2-201ENST00000055077 LORP23490 312 aaPredicted RBP10.7□□□□□ -0.7
RFC2-201ENST00000055077 R4GN34 69 aa10.7□□□□□ -0.7
RFC2-201ENST00000055077 LCE2AQ5TA79 106 aaPredicted RBP10.66□□□□□ -0.7
RFC2-201ENST00000055077 KRTAP9-8Q9BYQ0 159 aa10.65□□□□□ -0.7
RFC2-201ENST00000055077 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
RFC2-201ENST00000055077 MT2AP02795 61 aa10.63□□□□□ -0.71
RFC2-201ENST00000055077 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
RFC2-201ENST00000055077 A0A0D9SG42 100 aa10.57□□□□□ -0.72
RFC2-201ENST00000055077 MT1FP04733 61 aa10.57□□□□□ -0.72
RFC2-201ENST00000055077 KRTAP10-10P60014 251 aa10.53□□□□□ -0.72
RFC2-201ENST00000055077 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
RFC2-201ENST00000055077 SPRR2GQ9BYE4 73 aa10.41□□□□□ -0.74
RFC2-201ENST00000055077 K7ERS5 55 aa10.39□□□□□ -0.75
RFC2-201ENST00000055077 KRTAP19-1Q8IUB9 90 aa10.37□□□□□ -0.75
RFC2-201ENST00000055077 KRTAP12-1P59990 96 aa10.36□□□□□ -0.75
RFC2-201ENST00000055077 KRTAP12-2P59991 146 aa10.33□□□□□ -0.76
RFC2-201ENST00000055077 SPINT4Q6UDR6 99 aa10.32□□□□□ -0.76
RFC2-201ENST00000055077 A6NN06 94 aa10.31□□□□□ -0.76
RFC2-201ENST00000055077 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
RFC2-201ENST00000055077 KRTAP9-3Q9BYQ3 159 aa10.27□□□□□ -0.77
RFC2-201ENST00000055077 KRTAP19-8Q3LI54 63 aa10.13□□□□□ -0.79
RFC2-201ENST00000055077 PLAC4Q8WY50 150 aa10.06□□□□□ -0.8
RFC2-201ENST00000055077 CAMK2N1Q7Z7J9 78 aa10.02□□□□□ -0.81
RFC2-201ENST00000055077 MT1BP07438 61 aa9.99□□□□□ -0.81
RFC2-201ENST00000055077 LCE2BO14633 110 aa9.98□□□□□ -0.81
RFC2-201ENST00000055077 ROMO1P60602 79 aa9.93□□□□□ -0.82
RFC2-201ENST00000055077 KTN1-AS1Q86SY8 53 aa9.85□□□□□ -0.83
RFC2-201ENST00000055077 C10orf95Q9H7T3 257 aa9.79□□□□□ -0.84
RFC2-201ENST00000055077 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
RFC2-201ENST00000055077 USH2AO75445 5202 aa9.68□□□□□ -0.86
RFC2-201ENST00000055077 MT1XP80297 61 aa9.67□□□□□ -0.86
RFC2-201ENST00000055077 KRTAP10-5P60370 271 aa9.65□□□□□ -0.86
RFC2-201ENST00000055077 PRAC1Q96KF2 57 aa9.62□□□□□ -0.87
RFC2-201ENST00000055077 PRO2289Q9P1D8 64 aa9.61□□□□□ -0.87
RFC2-201ENST00000055077 SVIPQ8NHG7 77 aa9.58□□□□□ -0.88
RFC2-201ENST00000055077 KRTAP25-1Q3LHN0 102 aa9.56□□□□□ -0.88
RFC2-201ENST00000055077 TNP1P09430 55 aa9.53□□□□□ -0.88
RFC2-201ENST00000055077 KRTAP19-6Q3LI70 58 aa9.39□□□□□ -0.91
RFC2-201ENST00000055077 SSPOA2VEC9 5147 aa9.38□□□□□ -0.91
RFC2-201ENST00000055077 KRTAP9-2Q9BYQ4 174 aa9.32□□□□□ -0.92
RFC2-201ENST00000055077 FSIP2Q5CZC0 6907 aa9.31□□□□□ -0.92
RFC2-201ENST00000055077 KRTAP10-7P60409 375 aaPredicted RBP9.27□□□□□ -0.93
RFC2-201ENST00000055077 PP632Q6XCG6 107 aa9.24□□□□□ -0.93
RFC2-201ENST00000055077 KRTAP23-1A1A580 65 aa9.23□□□□□ -0.93
RFC2-201ENST00000055077 KRTAP10-12P60413 245 aa9.2□□□□□ -0.94
RFC2-201ENST00000055077 LCE3AQ5TA76 89 aa9.12□□□□□ -0.95
RFC2-201ENST00000055077 CRCT1Q9UGL9 99 aa8.99□□□□□ -0.97
RFC2-201ENST00000055077 FCGBPQ9Y6R7 5405 aaPredicted RBP8.98□□□□□ -0.97
RFC2-201ENST00000055077 KRTAP8-1Q8IUC2 63 aa8.93□□□□□ -0.98
RFC2-201ENST00000055077 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
RFC2-201ENST00000055077 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
RFC2-201ENST00000055077 KMT2DO14686 5537 aa8.86□□□□□ -0.99
RFC2-201ENST00000055077 KRTAP12-3P60328 96 aa8.76□□□□□ -1.01
RFC2-201ENST00000055077 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
RFC2-201ENST00000055077 KRTAP19-7Q3SYF9 63 aa8.62□□□□□ -1.03
RFC2-201ENST00000055077 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
RFC2-201ENST00000055077 MACF1Q9UPN3 7388 aaKnown RBP8.59□□□□□ -1.03
RFC2-201ENST00000055077 KRTAP15-1Q3LI76 137 aa8.57□□□□□ -1.04
RFC2-201ENST00000055077 MT1EP04732 61 aa8.48□□□□□ -1.05
RFC2-201ENST00000055077 SPRR2FQ96RM1 72 aa8.34□□□□□ -1.07
RFC2-201ENST00000055077 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.33□□□□□ -1.08
RFC2-201ENST00000055077 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
RFC2-201ENST00000055077 MT1LQ93083 61 aa8.3□□□□□ -1.08
RFC2-201ENST00000055077 KRTAP5-9P26371 169 aa8.27□□□□□ -1.09
RFC2-201ENST00000055077 KRTAP19-4Q3LI73 84 aa8.21□□□□□ -1.09
RFC2-201ENST00000055077 MUC12Q9UKN1 5478 aa8.18□□□□□ -1.1
RFC2-201ENST00000055077 LCE3CQ5T5A8 94 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms