RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Leprotl1Q9CQ74 131 aa4.92□□□□□ -1.62
Lig4-202ENSMUST00000170033 Obox8V9GWY9 217 aa4.92□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ighv2-6A0A075B6A7 116 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm33815A0A087WNV3 176 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm29644A0A087WPG2 191 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ighv1-37A0A0A6YW32 117 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm45521A0A1B0GRK0 198 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Defa35E9QLQ1 93 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm15056F6ZR08 88 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ebi3O35228 228 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 NpsP0C0P8 89 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Timm8bP62077 83 aaKnown RBP4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Spink13Q3UTS8 97 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 FshbQ60687 130 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Scgb2b24Q7M747 112 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm12689Q8BQU9 117 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Olfr958Q8VEY3 312 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Pla2g2dQ9WVF6 144 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm4565A0A140LJ87 301 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Olfr364-ps1A0A140T8Q2 307 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm6793B2RXM2 351 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Fgfbp1O70514 251 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 P01806 116 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Q24JP4 165 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Rph3alQ768S4 302 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Pgpep1lQ9CWB5 130 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Lypd8Q9D7S0 255 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Znf580Q9DB38 172 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Prune2Q52KR3 3084 aa4.91□□□□□ -1.62
Lig4-202ENSMUST00000170033 Trav14-3A0A075B607 120 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Trav16d-dv11A0A075B617 117 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Trav16nA0A075B634 117 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 AsipQ03288 131 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Defa24Q5G865 93 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Hes7Q8BKT2 225 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Fam24aQ8CF27 98 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 GalmQ8K157 342 aa4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Mrpl53Q9D1H8 118 aaKnown RBP4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Dnajc13D4AFX7 2248 aaKnown RBP4.9□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm2174F6ZVF2 133 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Saa4P31532 130 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Higd1cQ76I25 96 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm9944Q8C559 102 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Ptrh2Q8R2Y8 181 aaKnown RBP4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 RetnQ99P87 114 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Slamf6Q9ET39 351 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Wisp2Q9Z0G4 251 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Asxl3Q8C4A5 2259 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Trav8-1A0A075B641 109 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Igkv1-132A0A0B4J1H9 120 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm28305F6U473 122 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Defa23Q5G866 93 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Slc35d2Q762D5 326 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 PirtQ8BFY0 135 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Parm1Q923D3 296 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Nhp2Q9CRB2 153 aaKnown RBP4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Atxn7l1Q9CZ05 146 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 CtrlQ9ER05 264 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rnf114Q9ET26 229 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 GlmpQ9JHJ3 404 aa4.9□□□□□ -1.63
Lig4-202ENSMUST00000170033 Smim13E9Q942 88 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 P06329 120 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Svs5P30933 122 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 ScxQ64124 207 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm11733Q8BQP1 125 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Vmn1r216Q8R257 298 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Olfr1012Q8VFJ7 311 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Tmem189Q99LQ7 271 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Mrpl20Q9CQL4 149 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Shisa9Q9CZN4 424 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Ccl24Q9JKC0 119 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 F5O88783 2183 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Dmxl1Q6PNC0 3013 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Vps13aQ5H8C4 3166 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Ighv1-81A0A075B5Y4 117 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm21887J3QQ04 176 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Reg3bP35230 175 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Trappc1Q5NCF2 145 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 9230109A22RikQ8BHE6 111 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rasl10aQ8K5A4 203 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rnf183Q8QZS5 190 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Vmn1r197Q8R265 298 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 HeylQ9DBX7 326 aa4.89□□□□□ -1.63
Lig4-202ENSMUST00000170033 Bdp1Q571C7 2467 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Brca2P97929 3329 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Jmjd1cQ69ZK6 2350 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 P01783 136 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Cox6a1P43024 111 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Slc17a2Q5SZA1 478 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Msrb3Q8BU85 253 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Slc25a39Q9D8K8 359 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Gm884A2A9H6 3643 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 AtmQ62388 3066 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 SpenQ62504 3644 aaKnown RBP4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Myo15aQ9QZZ4 3511 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Trav3-4A0A075B654 114 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Trav14d-1A0A075B6B1 121 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Olfr1192-ps1A0A1L1SRD7 309 aa4.88□□□□□ -1.63
Lig4-202ENSMUST00000170033 Tmem141A2AJB2 108 aa4.88□□□□□ -1.63
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms