RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Tex26Q0VB26 296 aa12.54□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Lmo1Q924W9 156 aa12.53□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Tln2Q71LX4 2375 aa12.53□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Igkv4-81A0A0G2JEY5 119 aa12.53□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Ahctf1Q8CJF7 2243 aaKnown RBP12.53□□□□□ -0.4
Ubr2-201ENSMUST00000113335 PtprdQ64487 1912 aa12.52□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Tcf24V9GWT9 166 aa12.52□□□□□ -0.4
Ubr2-201ENSMUST00000113335 Igkv3-1A0A075B5P1 119 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ca1P13634 261 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Pom121l2Q5SW25 972 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 LeprotO89013 131 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Tnfrsf26P83626 204 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Fhl4Q8CDC8 279 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 MplkipQ9D011 178 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ank3G5E8K5 1961 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Trav14n-2A0A0G2JDF5 121 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 E130218I03RikA0A0U1RNU5 63 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Defa21Q8C1P2 93 aa12.52□□□□□ -0.41
Ubr2-201ENSMUST00000113335 P01793 123 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gatd1Q8BFQ8 220 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 HampQ9EQ21 83 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 LctF8VPT3 1931 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Igkv12-89A0A0G2JGW8 112 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Luzp4B1AV09 449 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm15127B1AVZ5 449 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm15107B1B0X0 449 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 GrnP28798 589 aaKnown RBP12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 AmelxP63277 210 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gata4Q08369 441 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm15085Q62012 449 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm9747Q810H1 104 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Pfn2Q9JJV2 140 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Med13Q5SWW4 2171 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ly86O88188 162 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm10604Q3V0X7 143 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Samd5Q3V1H9 173 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Rpl32-psP17932 135 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Taf15Q8BQ46 557 aaKnown RBP12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Fhl3Q9R059 289 aa12.51□□□□□ -0.41
Ubr2-201ENSMUST00000113335 H2al1jA2BFR3 109 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Defb26Q30KN7 186 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Dpm3Q9D1Q4 92 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 P01649 108 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Tpsab1Q02844 273 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 A930003A15RikQ3U552 87 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Sslp1Q3UN54 99 aa12.5□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Igkv4-59A0A0B4J1I8 117 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Igkv4-61A0A0G2JH00 117 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Socs3O35718 225 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Phf3B2RQG2 2025 aaKnown RBP12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm28778A0A087WSK7 233 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 3110082J24RikF6Z6Z2 108 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 B230307C23RikQ8BLB2 64 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 GlrxQ9QUH0 107 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Thsd7bQ6P4U0 1607 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 P01680 129 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Tanc1Q0VGY8 1856 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 LitafQ9JLJ0 161 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Igkv5-37A0A140T8N4 115 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm5294J3QP53 216 aa12.49□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gtsf1Q9DAN6 167 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Pkd1l3Q2EG98 2201 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Trav14-3A0A075B607 120 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Trav14d-3-dv8A0A075B619 120 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ighv6-7A0A0A6YWU3 119 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Cela2aP05208 271 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Runx1Q03347 451 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Sdhaf1Q3U276 118 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Q8R092 253 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Sbf1Q6ZPE2 1867 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Trav14-2A0A075B694 121 aa12.48□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Bcorl1A2AQH4 1781 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Cd24P24807 76 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 CtsgP28293 261 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Morn3Q8C5T4 241 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Itgb4A2A863 1818 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ighv1-39A0A075B5V5 117 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Gm2174F6ZVF2 133 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ube2e1P52482 193 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ndufa4Q62425 82 aaKnown RBP12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Q8C708 225 aa12.47□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Minos1Q7TNS2 76 aa12.46□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Bex1Q9R224 128 aa12.46□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Clec4b2Q67DU8 208 aa12.46□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Rnf138Q9CQE0 245 aaKnown RBP12.46□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Reg3dQ9QUS9 175 aa12.46□□□□□ -0.41
Ubr2-201ENSMUST00000113335 Ang5Q5GAN1 145 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Slc25a48Q8BW66 306 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Cd300eQ8K249 196 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Igkv4-72A0A0B4J1I4 117 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Lhfpl1Q80SV1 220 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Foxi1Q922I5 372 aa12.46□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Chchd5Q9CQP3 110 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Zic4Q61467 341 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Zfp407G3UVV3 2246 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 ThadaA8C756 1938 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Gm5129F6YHA9 99 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Sigmar1O55242 223 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 A530064D06RikQ8BNV8 229 aa12.45□□□□□ -0.42
Ubr2-201ENSMUST00000113335 Fam208bQ5DTT3 2382 aa12.45□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 67.9 ms