RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 C1ql2Q8CFR0 287 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Fhl5Q9WTX7 284 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 P01739 132 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Ighv5-12-4A0A0A6YWG4 117 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Ighv3-8A0A075B5T0 131 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Cd200r1lQ6XJV6 249 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Cox7cP17665 63 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 F930015N05RikQ8C3A3 210 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Synj2bpQ9D6K5 145 aa15.07■□□□□ 0
Trim71-201ENSMUST00000111816 Nbl1Q61477 178 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 BC049762Q8C601 163 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 H2al1aQ5M8Q2 105 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 H2al1eQ810S6 105 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 Pfn2Q9JJV2 140 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 1700074P13RikQ9D9G7 251 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 Ssc4dA1L0T3 586 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 Q91WE4 72 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 C2cd4dP0CG09 341 aa15.06■□□□□ 0
Trim71-201ENSMUST00000111816 Cxcl10P17515 98 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 Il22ra2Q80XF5 230 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 9230102O04RikA2ASX7 82 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 Ndufs5Q99LY9 106 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 P01726 129 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 Clec4b2Q67DU8 208 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 Nabp1Q8BGW5 198 aa15.05■□□□□ 0
Trim71-201ENSMUST00000111816 Zfp36l2P23949 484 aaKnown RBP15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Gm10645Q3UPY1 145 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Zfp420Q7TMN8 578 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Gtf3aQ8VHT7 364 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Foxc1Q61572 553 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Wipf2Q6PEV3 440 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 Ss18l1Q8BW22 402 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 PpbpQ9EQI5 113 aa15.05■□□□□ -0
Trim71-201ENSMUST00000111816 P04219 140 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Wdr83osQ6ZWX0 106 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 SisF8VQM5 1818 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Phxr1P15973 60 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Gm4894Q8CA09 118 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Zpld1Q8BGZ8 415 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 P01812 117 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Reg1P43137 165 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Neurog3P70661 214 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Defb33Q30KN3 62 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Trav4d-3A0A075B625 110 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Ighv7-2A0A0A6YX91 119 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Dad1P61804 113 aa15.04■□□□□ -0
Trim71-201ENSMUST00000111816 Gm28778A0A087WSK7 233 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 P01648 108 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Morn5Q9DAI9 170 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 1110002E22RikE0CYV9 1786 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Rai1Q61818 1889 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Gm10188Q3V432 135 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Plxna4Q80UG2 1893 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 H2al1bA0A087WP11 105 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Leap2Q91V13 76 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Gm9936Q8C864 160 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Igkv8-34A0A0G2JDU0 121 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 KcpQ3U492 1550 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 Igkv10-94A0A075B5L1 115 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 P01802 115 aa15.03■□□□□ -0
Trim71-201ENSMUST00000111816 GgnQ80WJ1 673 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 1700031F05RikB1AX30 191 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 P01667 111 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 Ighv1-37A0A0A6YW32 117 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 4931422A03RikA2BHN9 113 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 Rnf114Q9ET26 229 aa15.02■□□□□ -0
Trim71-201ENSMUST00000111816 Gm19684G3UZ45 117 aa15.02□□□□□ -0.01
Trim71-201ENSMUST00000111816 Egr2P08152 470 aa15.02□□□□□ -0.01
Trim71-201ENSMUST00000111816 Prss22Q9ER10 306 aa15.02□□□□□ -0.01
Trim71-201ENSMUST00000111816 Cryba4Q9JJV0 196 aa15.02□□□□□ -0.01
Trim71-201ENSMUST00000111816 Trav6-4A0A075B6B4 115 aa15.02□□□□□ -0.01
Trim71-201ENSMUST00000111816 Gm2564F6Z9S8 108 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ccl19O70460 108 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ube2bP63147 152 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ndufb1P0DN34 57 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Shisa3Q3UPR0 238 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 6430628N08RikA0A0U1RQ45 177 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ang6Q5GAN0 147 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 Iglc2P01844 104 aa15.01□□□□□ -0.01
Trim71-201ENSMUST00000111816 P01724 129 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 P01727 129 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Q8VC23 124 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Slc17a9Q8VCL5 447 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ms4a8Q99N10 290 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Nhlrc4Q3UP44 136 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Acyp1P56376 99 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Tex36Q9D5N9 219 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Spink4O35679 86 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Defb4P82019 63 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ndufa1O35683 70 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Hs3st6Q5GFD5 342 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 BmperQ8CJ69 685 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Fam53bQ8BGR5 422 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Zg16Q8K0C5 167 aa15□□□□□ -0.01
Trim71-201ENSMUST00000111816 Gm33815A0A087WNV3 176 aa14.99□□□□□ -0.01
Trim71-201ENSMUST00000111816 Wisp1O54775 367 aa14.99□□□□□ -0.01
Trim71-201ENSMUST00000111816 Dand5Q76LW6 185 aa14.99□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ndufc1Q9CQY9 76 aa14.98□□□□□ -0.01
Trim71-201ENSMUST00000111816 Ighv1-7A0A075B5T7 117 aa14.98□□□□□ -0.01
Trim71-201ENSMUST00000111816 Tomm6Q9CQN3 74 aa14.98□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 178.4 ms