RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 P01843 105 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Vsig8Q6P3A4 417 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Vmn1r62Q8R2C0 300 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Rab1bQ9D1G1 201 aa11.52□□□□□ -0.56
Ushbp1-201ENSMUST00000049184 Cd59aO55186 123 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ccl11P48298 97 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Olfr311Q5NC59 308 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Trav6-2Q5R1I4 113 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Spink2Q8BMY7 86 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Olfr873Q8VFJ0 319 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Rab9aQ9R0M6 201 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Csmd1Q923L3 3564 aa11.52□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Esp23A8R0V5 104 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ndufa1O35683 70 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gpx7Q99LJ6 186 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 TprF6ZDS4 2431 aaKnown RBP11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 A730046J19RikA0A1B0GSN8 89 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Nxph4G3X9N5 304 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 E030018B13RikJ3QMS9 113 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 P06330 118 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Fxyd7P59648 80 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Snrnp40Q6PE01 358 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 A730015C16RikQ8C992 119 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Mrpl33Q9CQP0 65 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Pygo1Q9D0P5 417 aa11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Rbmxl2Q9DAE2 385 aaKnown RBP11.51□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Trav7n-5A0A075B604 112 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 1520401A03RikA0A0J9YVH6 598 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Tctex1d4Q8CDY7 219 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 8030423J24RikQ9CX45 142 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 B1ARW8 110 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Esp3J3QN49 87 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 P01748 117 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Spink13Q3UTS8 97 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Khdc1aQ3UWR2 166 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Srsf2Q62093 221 aaKnown RBP11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Olfr553Q7TRS6 326 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ndufb3Q9CQZ6 104 aa11.5□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ighv1-55A0A075B5W6 117 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gm28038F7BCN9 126 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 TcraP01849 138 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Tmem210Q9D2F0 147 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Timm23Q9WTQ8 209 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Wdfy4E9Q2M9 3149 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 G430095P16RikE9Q913 147 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ins1P01325 108 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Tdgf1P51865 171 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Prrx2Q06348 247 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ndufa4l2Q4FZG9 87 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Prima1Q810F0 153 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ly6g6dQ9Z1Q3 135 aa11.49□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ighv14-2A0A075B5R7 117 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Amn1B8JKV0 258 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Cks1bP61025 79 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gm94Q3V2D2 93 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Cryba4Q9JJV0 196 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Abca7Q91V24 2159 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gm28269A0A087WSG3 125 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ebi3O35228 228 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Smim1P0C8K7 78 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ccl3P10855 92 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Olfr1209Q3SXJ3 310 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Spock3Q8BKV0 436 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gm10118Q8C8J5 116 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 AamdcQ8R0P4 122 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 ManfQ9CXI5 179 aaKnown RBP11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Clec5aQ9R007 190 aa11.48□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ighv4-1A0A075B5R5 116 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Ccl25O35903 144 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Gp9O88186 177 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Sh3bgrl2Q8BG73 107 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Icam4Q9ERM2 262 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Tcrg-C1A0A075B5Z0 172 aa11.47□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 1700003H04RikE9PXM2 192 aa11.46□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Fam222aQ6PGH4 453 aa11.46□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Chac1Q8R3J5 223 aa11.46□□□□□ -0.57
Ushbp1-201ENSMUST00000049184 Vamp8O70404 101 aa11.46□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm5105Q8C6Y9 112 aa11.46□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Hoxc12Q8K5B8 280 aa11.46□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Prss41Q920S2 322 aa11.46□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Prss29Q99MS4 279 aa11.46□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ighv1-22A0A075B5U7 117 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ighv1-23A0A0A6YVW3 117 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Defa3P28310 93 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Defa10P50708 93 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Defa15P50713 93 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Smr3aQ61900 147 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 TctaQ8VEA7 122 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Plxdc1Q91ZV7 500 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 P06334 169 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Snai3Q9QY31 287 aa11.45□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Ighv8-12A0A0G2JDE1 119 aa11.44□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Med12A2AGH6 2190 aa11.44□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Q9CX63 252 aa11.44□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Trav7-2Q5R1I3 112 aa11.44□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm26938S4R185 226 aa11.44□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 KalrnA2CG49 2964 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Trav19A0A0B4J1K4 119 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Onecut1O08755 465 aa11.43□□□□□ -0.58
Ushbp1-201ENSMUST00000049184 Gm12888Q3UW77 119 aa11.43□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 75.3 ms