RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 J3QR89 54 aa5.3□□□□□ -1.56
PHGDH-228ENST00000641847 MUC17Q685J3 4493 aa5.29□□□□□ -1.56
PHGDH-228ENST00000641847 ACYP1P07311 99 aa5.29□□□□□ -1.56
PHGDH-228ENST00000641847 NREPQ16612 68 aa5.29□□□□□ -1.56
PHGDH-228ENST00000641847 C1orf195Q5TG92 126 aa5.29□□□□□ -1.56
PHGDH-228ENST00000641847 Q96NJ1 140 aa5.29□□□□□ -1.56
PHGDH-228ENST00000641847 Q6ZVQ6 151 aa5.28□□□□□ -1.56
PHGDH-228ENST00000641847 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
PHGDH-228ENST00000641847 K7ERU9 68 aa5.27□□□□□ -1.57
PHGDH-228ENST00000641847 SIGMAR1Q99720 223 aa5.27□□□□□ -1.57
PHGDH-228ENST00000641847 LINC00472Q9H8W2 130 aa5.27□□□□□ -1.57
PHGDH-228ENST00000641847 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
PHGDH-228ENST00000641847 IGKV4-1P06312 121 aa5.25□□□□□ -1.57
PHGDH-228ENST00000641847 J3KT08 172 aa5.24□□□□□ -1.57
PHGDH-228ENST00000641847 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
PHGDH-228ENST00000641847 FP248Q71RG6 208 aaPredicted RBP5.24□□□□□ -1.57
PHGDH-228ENST00000641847 BPY2O14599 106 aa5.23□□□□□ -1.57
PHGDH-228ENST00000641847 IGLV7-46A0A075B6I9 117 aa5.21□□□□□ -1.58
PHGDH-228ENST00000641847 DSCR10P59022 87 aa5.2□□□□□ -1.58
PHGDH-228ENST00000641847 ATP5EP2Q5VTU8 51 aa5.2□□□□□ -1.58
PHGDH-228ENST00000641847 LINC00643Q86TS7 51 aa5.2□□□□□ -1.58
PHGDH-228ENST00000641847 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
PHGDH-228ENST00000641847 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
PHGDH-228ENST00000641847 A8MWP4 228 aa5.19□□□□□ -1.58
PHGDH-228ENST00000641847 NDUFB1O75438 58 aa5.19□□□□□ -1.58
PHGDH-228ENST00000641847 CXCL6P80162 114 aa5.19□□□□□ -1.58
PHGDH-228ENST00000641847 IGHV6-1A0A0B4J1U7 121 aa5.18□□□□□ -1.58
PHGDH-228ENST00000641847 K7EQZ3 153 aa5.18□□□□□ -1.58
PHGDH-228ENST00000641847 Q8N9L7 120 aa5.18□□□□□ -1.58
PHGDH-228ENST00000641847 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
PHGDH-228ENST00000641847 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
PHGDH-228ENST00000641847 KRTAP13-3Q3SY46 172 aa5.16□□□□□ -1.58
PHGDH-228ENST00000641847 C8orf87E5RJ46 101 aa5.15□□□□□ -1.59
PHGDH-228ENST00000641847 KRTAP9-7A8MTY7 169 aa5.14□□□□□ -1.59
PHGDH-228ENST00000641847 SEC61BP60468 96 aaKnown RBP5.14□□□□□ -1.59
PHGDH-228ENST00000641847 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
PHGDH-228ENST00000641847 LINC00313P59037 77 aa5.13□□□□□ -1.59
PHGDH-228ENST00000641847 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
PHGDH-228ENST00000641847 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
PHGDH-228ENST00000641847 HIST1H4AP62805 103 aaKnown RBP5.12□□□□□ -1.59
PHGDH-228ENST00000641847 MT-ATP8P03928 68 aa5.11□□□□□ -1.59
PHGDH-228ENST00000641847 KRTAP16-1A8MUX0 517 aa5.1□□□□□ -1.59
PHGDH-228ENST00000641847 HCG22E2RYF7 251 aa5.1□□□□□ -1.59
PHGDH-228ENST00000641847 XP32Q5T750 250 aa5.1□□□□□ -1.59
PHGDH-228ENST00000641847 A0A087WVE0 104 aa5.09□□□□□ -1.59
PHGDH-228ENST00000641847 hDV103S1A0JD37 113 aa5.09□□□□□ -1.59
PHGDH-228ENST00000641847 WFDC13Q8IUB5 93 aa5.09□□□□□ -1.59
PHGDH-228ENST00000641847 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
PHGDH-228ENST00000641847 TMEM254Q8TBM7 123 aa5.08□□□□□ -1.6
PHGDH-228ENST00000641847 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
PHGDH-228ENST00000641847 PCP4P48539 62 aa5.06□□□□□ -1.6
PHGDH-228ENST00000641847 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
PHGDH-228ENST00000641847 MRPL34Q9BQ48 92 aaKnown RBP5.06□□□□□ -1.6
PHGDH-228ENST00000641847 A8MUU9 505 aa5.05□□□□□ -1.6
PHGDH-228ENST00000641847 RPL37P61927 97 aaKnown RBP5.05□□□□□ -1.6
PHGDH-228ENST00000641847 Q75L30 129 aa5.05□□□□□ -1.6
PHGDH-228ENST00000641847 IMUPQ9GZP8 106 aa5.05□□□□□ -1.6
PHGDH-228ENST00000641847 NDUFS5O43920 106 aa5.03□□□□□ -1.6
PHGDH-228ENST00000641847 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
PHGDH-228ENST00000641847 KRTAP4-1Q9BYQ7 146 aa5.02□□□□□ -1.61
PHGDH-228ENST00000641847 M0R2T5 61 aa5.01□□□□□ -1.61
PHGDH-228ENST00000641847 MT1HP80294 61 aa5.01□□□□□ -1.61
PHGDH-228ENST00000641847 FAM236AA0A1B0GUQ0 79 aa4.99□□□□□ -1.61
PHGDH-228ENST00000641847 FAM236BA0A1B0GV22 79 aa4.99□□□□□ -1.61
PHGDH-228ENST00000641847 KRTAP10-6P60371 365 aaPredicted RBP4.98□□□□□ -1.61
PHGDH-228ENST00000641847 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
PHGDH-228ENST00000641847 PCOTHQ58A44 107 aa4.97□□□□□ -1.61
PHGDH-228ENST00000641847 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
PHGDH-228ENST00000641847 SCGB1A1P11684 91 aa4.96□□□□□ -1.62
PHGDH-228ENST00000641847 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
PHGDH-228ENST00000641847 USH2AO75445 5202 aa4.95□□□□□ -1.62
PHGDH-228ENST00000641847 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
PHGDH-228ENST00000641847 OCR1Q9BZK8 76 aa4.94□□□□□ -1.62
PHGDH-228ENST00000641847 ATOX1O00244 68 aa4.93□□□□□ -1.62
PHGDH-228ENST00000641847 Q5W150 140 aa4.93□□□□□ -1.62
PHGDH-228ENST00000641847 UQCRQO14949 82 aa4.92□□□□□ -1.62
PHGDH-228ENST00000641847 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.62
PHGDH-228ENST00000641847 SYNE2Q8WXH0 6885 aaKnown RBP4.9□□□□□ -1.62
PHGDH-228ENST00000641847 TRAV22A0A0B4J277 110 aa4.9□□□□□ -1.63
PHGDH-228ENST00000641847 KRTAP19-2Q3LHN2 52 aa4.9□□□□□ -1.63
PHGDH-228ENST00000641847 COX6B2Q6YFQ2 88 aa4.9□□□□□ -1.63
PHGDH-228ENST00000641847 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
PHGDH-228ENST00000641847 H0Y9P7 68 aa4.89□□□□□ -1.63
PHGDH-228ENST00000641847 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
PHGDH-228ENST00000641847 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
PHGDH-228ENST00000641847 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
PHGDH-228ENST00000641847 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
PHGDH-228ENST00000641847 MP68P56378 58 aa4.86□□□□□ -1.63
PHGDH-228ENST00000641847 SPINK7P58062 85 aa4.86□□□□□ -1.63
PHGDH-228ENST00000641847 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
PHGDH-228ENST00000641847 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
PHGDH-228ENST00000641847 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
PHGDH-228ENST00000641847 LOC101927531A0A1B0GV80 90 aa4.84□□□□□ -1.63
PHGDH-228ENST00000641847 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
PHGDH-228ENST00000641847 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
PHGDH-228ENST00000641847 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
PHGDH-228ENST00000641847 LINC00208Q96KT6 92 aa4.83□□□□□ -1.64
PHGDH-228ENST00000641847 KRTAP23-1A1A580 65 aa4.81□□□□□ -1.64
PHGDH-228ENST00000641847 H3BPC8 53 aa4.81□□□□□ -1.64
PHGDH-228ENST00000641847 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms