RNA–Protein interactions for RNA: ENST00000641421.1

CASC19-230, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,530 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-230ENST00000641421 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
CASC19-230ENST00000641421 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
CASC19-230ENST00000641421 ATP5EP56381 51 aaPredicted RBP6.18□□□□□ -1.42
CASC19-230ENST00000641421 Q5XG85 94 aa6.18□□□□□ -1.42
CASC19-230ENST00000641421 H0Y9P7 68 aa6.17□□□□□ -1.42
CASC19-230ENST00000641421 TYMSOSQ8TAI1 123 aa6.16□□□□□ -1.42
CASC19-230ENST00000641421 H3BPC8 53 aa6.15□□□□□ -1.42
CASC19-230ENST00000641421 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.42
CASC19-230ENST00000641421 LINC00208Q96KT6 92 aa6.15□□□□□ -1.42
CASC19-230ENST00000641421 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.42
CASC19-230ENST00000641421 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
CASC19-230ENST00000641421 TP53AIP1Q9HCN2 124 aa6.15□□□□□ -1.42
CASC19-230ENST00000641421 C4orf48Q5BLP8 95 aa6.15□□□□□ -1.43
CASC19-230ENST00000641421 C1orf195Q5TG92 126 aa6.15□□□□□ -1.43
CASC19-230ENST00000641421 SERP1Q9Y6X1 66 aa6.15□□□□□ -1.43
CASC19-230ENST00000641421 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
CASC19-230ENST00000641421 NDUFS5O43920 106 aa6.14□□□□□ -1.43
CASC19-230ENST00000641421 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
CASC19-230ENST00000641421 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
CASC19-230ENST00000641421 OXTP01178 125 aa6.11□□□□□ -1.43
CASC19-230ENST00000641421 PRR26Q8N8Z3 221 aa6.11□□□□□ -1.43
CASC19-230ENST00000641421 C1orf64Q8NEQ6 169 aa6.11□□□□□ -1.43
CASC19-230ENST00000641421 SPINK1P00995 79 aa6.1□□□□□ -1.43
CASC19-230ENST00000641421 KRTAP10-4P60372 401 aaPredicted RBP6.1□□□□□ -1.43
CASC19-230ENST00000641421 LINC00313P59037 77 aa6.09□□□□□ -1.44
CASC19-230ENST00000641421 LINC00304Q8N9R0 145 aa6.09□□□□□ -1.44
CASC19-230ENST00000641421 RYR2Q92736 4967 aa6.08□□□□□ -1.44
CASC19-230ENST00000641421 SPAG11AQ6PDA7 123 aa6.08□□□□□ -1.44
CASC19-230ENST00000641421 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
CASC19-230ENST00000641421 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
CASC19-230ENST00000641421 CYP4F30PQ9H0H9 118 aa6.04□□□□□ -1.44
CASC19-230ENST00000641421 PKHD1P08F94 4074 aa6.03□□□□□ -1.44
CASC19-230ENST00000641421 APOBP04114 4563 aaKnown RBP6.03□□□□□ -1.44
CASC19-230ENST00000641421 PRR4Q16378 134 aa6.03□□□□□ -1.44
CASC19-230ENST00000641421 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
CASC19-230ENST00000641421 FAM229AH3BQW9 127 aa6.02□□□□□ -1.45
CASC19-230ENST00000641421 SMIM26A0A096LP01 95 aa6.01□□□□□ -1.45
CASC19-230ENST00000641421 Q5W150 140 aa6.01□□□□□ -1.45
CASC19-230ENST00000641421 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
CASC19-230ENST00000641421 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
CASC19-230ENST00000641421 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
CASC19-230ENST00000641421 KRTAP13-3Q3SY46 172 aa5.99□□□□□ -1.45
CASC19-230ENST00000641421 PCOTHQ58A44 107 aa5.99□□□□□ -1.45
CASC19-230ENST00000641421 LCE2AQ5TA79 106 aaPredicted RBP5.99□□□□□ -1.45
CASC19-230ENST00000641421 IGLV7-46A0A075B6I9 117 aa5.97□□□□□ -1.45
CASC19-230ENST00000641421 J3QL48 77 aa5.96□□□□□ -1.46
CASC19-230ENST00000641421 FAT1Q14517 4588 aa5.96□□□□□ -1.46
CASC19-230ENST00000641421 KMT2CQ8NEZ4 4911 aaKnown RBP5.95□□□□□ -1.46
CASC19-230ENST00000641421 Q5VSD8 79 aa5.95□□□□□ -1.46
CASC19-230ENST00000641421 RETNLBQ9BQ08 111 aa5.95□□□□□ -1.46
CASC19-230ENST00000641421 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
CASC19-230ENST00000641421 C4orf26Q17RF5 130 aa5.91□□□□□ -1.46
CASC19-230ENST00000641421 IGKV2-30P06310 120 aa5.9□□□□□ -1.46
CASC19-230ENST00000641421 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
CASC19-230ENST00000641421 COA5Q86WW8 74 aa5.88□□□□□ -1.47
CASC19-230ENST00000641421 Q8N1X5 172 aa5.88□□□□□ -1.47
CASC19-230ENST00000641421 MPLKIPQ8TAP9 179 aa5.88□□□□□ -1.47
CASC19-230ENST00000641421 PKHD1L1Q86WI1 4243 aa5.88□□□□□ -1.47
CASC19-230ENST00000641421 C9orf92A6NGG3 77 aa5.87□□□□□ -1.47
CASC19-230ENST00000641421 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
CASC19-230ENST00000641421 HRES1P13985 223 aa5.85□□□□□ -1.47
CASC19-230ENST00000641421 Q1T7F1 81 aa5.84□□□□□ -1.48
CASC19-230ENST00000641421 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.48
CASC19-230ENST00000641421 KRTAP17-1Q9BYP8 105 aa5.84□□□□□ -1.48
CASC19-230ENST00000641421 A8MUU9 505 aa5.83□□□□□ -1.48
CASC19-230ENST00000641421 RYR3Q15413 4870 aa5.83□□□□□ -1.48
CASC19-230ENST00000641421 HSPG2P98160 4391 aa5.82□□□□□ -1.48
CASC19-230ENST00000641421 ACYP2P14621 99 aa5.8□□□□□ -1.48
CASC19-230ENST00000641421 LCE2CQ5TA81 110 aa5.8□□□□□ -1.48
CASC19-230ENST00000641421 DMAC1Q96GE9 116 aa5.8□□□□□ -1.48
CASC19-230ENST00000641421 V9GYY9 64 aa5.8□□□□□ -1.48
CASC19-230ENST00000641421 C7orf65Q6ZTY9 151 aa5.79□□□□□ -1.48
CASC19-230ENST00000641421 FLG2Q5D862 2391 aaPredicted RBP5.79□□□□□ -1.48
CASC19-230ENST00000641421 RYR1P21817 5038 aa5.78□□□□□ -1.48
CASC19-230ENST00000641421 Q75L30 129 aa5.75□□□□□ -1.49
CASC19-230ENST00000641421 MT1HL1P0DM35 61 aa5.74□□□□□ -1.49
CASC19-230ENST00000641421 PSPHP1O15172 72 aa5.74□□□□□ -1.49
CASC19-230ENST00000641421 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
CASC19-230ENST00000641421 A8MUN3 132 aa5.72□□□□□ -1.49
CASC19-230ENST00000641421 LRP1Q07954 4544 aaKnown RBP5.71□□□□□ -1.5
CASC19-230ENST00000641421 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
CASC19-230ENST00000641421 TNXBP22105 4242 aa5.7□□□□□ -1.5
CASC19-230ENST00000641421 PRR15LQ9BU68 103 aa5.7□□□□□ -1.5
CASC19-230ENST00000641421 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
CASC19-230ENST00000641421 SPINK7P58062 85 aa5.68□□□□□ -1.5
CASC19-230ENST00000641421 Q5VV11 94 aa5.68□□□□□ -1.5
CASC19-230ENST00000641421 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
CASC19-230ENST00000641421 ATP11AUNQ6ZP68 121 aa5.67□□□□□ -1.5
CASC19-230ENST00000641421 RPL37P61927 97 aaKnown RBP5.66□□□□□ -1.5
CASC19-230ENST00000641421 XP32Q5T750 250 aa5.65□□□□□ -1.5
CASC19-230ENST00000641421 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
CASC19-230ENST00000641421 LORP23490 312 aaPredicted RBP5.63□□□□□ -1.51
CASC19-230ENST00000641421 KRTAP4-5Q9BYR2 181 aa5.63□□□□□ -1.51
CASC19-230ENST00000641421 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
CASC19-230ENST00000641421 KRTAP4-8Q9BYQ9 185 aa5.62□□□□□ -1.51
CASC19-230ENST00000641421 EPPK1P58107 5090 aaKnown RBP5.61□□□□□ -1.51
CASC19-230ENST00000641421 PRO0628Q9UI54 55 aa5.61□□□□□ -1.51
CASC19-230ENST00000641421 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
CASC19-230ENST00000641421 KRTAP3-1Q9BYR8 98 aa5.58□□□□□ -1.52
CASC19-230ENST00000641421 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms