RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 CSMD3Q7Z407 3707 aa5.84□□□□□ -1.47
KCNMA1-228ENST00000638223 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.47
KCNMA1-228ENST00000638223 LINC01600Q96MT4 127 aa5.84□□□□□ -1.47
KCNMA1-228ENST00000638223 RBM12B-AS1Q9P1G2 102 aa5.84□□□□□ -1.47
KCNMA1-228ENST00000638223 A0A0U1RQV1 116 aa5.84□□□□□ -1.48
KCNMA1-228ENST00000638223 A0A1B0GU69 56 aa5.83□□□□□ -1.48
KCNMA1-228ENST00000638223 C1orf195Q5TG92 126 aa5.83□□□□□ -1.48
KCNMA1-228ENST00000638223 DYNC2H1Q8NCM8 4307 aaKnown RBP5.83□□□□□ -1.48
KCNMA1-228ENST00000638223 HUWE1Q7Z6Z7 4374 aaKnown RBP5.83□□□□□ -1.48
KCNMA1-228ENST00000638223 LINC00472Q9H8W2 130 aa5.82□□□□□ -1.48
KCNMA1-228ENST00000638223 LYSTQ99698 3801 aa5.81□□□□□ -1.48
KCNMA1-228ENST00000638223 LINC00483Q53H64 154 aa5.81□□□□□ -1.48
KCNMA1-228ENST00000638223 SVIPQ8NHG7 77 aa5.8□□□□□ -1.48
KCNMA1-228ENST00000638223 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
KCNMA1-228ENST00000638223 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
KCNMA1-228ENST00000638223 COA5Q86WW8 74 aa5.78□□□□□ -1.48
KCNMA1-228ENST00000638223 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
KCNMA1-228ENST00000638223 KLKP1Q107X0 134 aa5.77□□□□□ -1.49
KCNMA1-228ENST00000638223 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
KCNMA1-228ENST00000638223 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
KCNMA1-228ENST00000638223 ZCCHC13Q8WW36 166 aaKnown RBP5.75□□□□□ -1.49
KCNMA1-228ENST00000638223 M0R2T5 61 aa5.74□□□□□ -1.49
KCNMA1-228ENST00000638223 Q8N9P0 234 aaPredicted RBP5.74□□□□□ -1.49
KCNMA1-228ENST00000638223 MEGF8Q7Z7M0 2845 aa5.73□□□□□ -1.49
KCNMA1-228ENST00000638223 KRTAP13-2Q52LG2 175 aa5.73□□□□□ -1.49
KCNMA1-228ENST00000638223 H7BZZ5 65 aa5.72□□□□□ -1.49
KCNMA1-228ENST00000638223 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
KCNMA1-228ENST00000638223 SPINK7P58062 85 aa5.71□□□□□ -1.49
KCNMA1-228ENST00000638223 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.49
KCNMA1-228ENST00000638223 HRES1P13985 223 aa5.7□□□□□ -1.5
KCNMA1-228ENST00000638223 LINC01554Q52M75 96 aa5.68□□□□□ -1.5
KCNMA1-228ENST00000638223 STARD9Q9P2P6 4700 aa5.68□□□□□ -1.5
KCNMA1-228ENST00000638223 Q5W150 140 aa5.67□□□□□ -1.5
KCNMA1-228ENST00000638223 FP248Q71RG6 208 aaPredicted RBP5.67□□□□□ -1.5
KCNMA1-228ENST00000638223 NOTCH2NLQ7Z3S9 236 aa5.67□□□□□ -1.5
KCNMA1-228ENST00000638223 RPS28P62857 69 aaKnown RBP5.66□□□□□ -1.5
KCNMA1-228ENST00000638223 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
KCNMA1-228ENST00000638223 A8MUN3 132 aa5.66□□□□□ -1.5
KCNMA1-228ENST00000638223 OXTP01178 125 aa5.65□□□□□ -1.5
KCNMA1-228ENST00000638223 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.51
KCNMA1-228ENST00000638223 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
KCNMA1-228ENST00000638223 SPANXA2-OT1Q8N9U9 137 aa5.62□□□□□ -1.51
KCNMA1-228ENST00000638223 FRAS1Q86XX4 4008 aa5.6□□□□□ -1.51
KCNMA1-228ENST00000638223 A0A0D9SG42 100 aa5.59□□□□□ -1.52
KCNMA1-228ENST00000638223 UQCR11O14957 56 aa5.58□□□□□ -1.52
KCNMA1-228ENST00000638223 DNAH6Q9C0G6 4158 aa5.58□□□□□ -1.52
KCNMA1-228ENST00000638223 CSAG1Q6PB30 78 aa5.57□□□□□ -1.52
KCNMA1-228ENST00000638223 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
KCNMA1-228ENST00000638223 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
KCNMA1-228ENST00000638223 VPS13DQ5THJ4 4388 aa5.56□□□□□ -1.52
KCNMA1-228ENST00000638223 KRTAP29-1A8MX34 341 aaPredicted RBP5.56□□□□□ -1.52
KCNMA1-228ENST00000638223 RPS29P62273 56 aaKnown RBP5.55□□□□□ -1.52
KCNMA1-228ENST00000638223 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
KCNMA1-228ENST00000638223 SPINT4Q6UDR6 99 aa5.54□□□□□ -1.52
KCNMA1-228ENST00000638223 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
KCNMA1-228ENST00000638223 DNAH2Q9P225 4427 aa5.53□□□□□ -1.52
KCNMA1-228ENST00000638223 S4R3F8 94 aa5.53□□□□□ -1.52
KCNMA1-228ENST00000638223 DNAH10Q8IVF4 4471 aa5.53□□□□□ -1.52
KCNMA1-228ENST00000638223 HYDINQ4G0P3 5121 aa5.52□□□□□ -1.53
KCNMA1-228ENST00000638223 A0A1B0GVY2 172 aa5.52□□□□□ -1.53
KCNMA1-228ENST00000638223 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
KCNMA1-228ENST00000638223 Q5XG85 94 aa5.5□□□□□ -1.53
KCNMA1-228ENST00000638223 SACSQ9NZJ4 4579 aa5.46□□□□□ -1.53
KCNMA1-228ENST00000638223 HECTD4Q9Y4D8 3996 aa5.46□□□□□ -1.54
KCNMA1-228ENST00000638223 FAT2Q9NYQ8 4349 aa5.45□□□□□ -1.54
KCNMA1-228ENST00000638223 PRO0628Q9UI54 55 aa5.44□□□□□ -1.54
KCNMA1-228ENST00000638223 RPL37P61927 97 aaKnown RBP5.44□□□□□ -1.54
KCNMA1-228ENST00000638223 Q75L30 129 aa5.44□□□□□ -1.54
KCNMA1-228ENST00000638223 A0A1B0GU33 70 aa5.44□□□□□ -1.54
KCNMA1-228ENST00000638223 PKD1P98161 4303 aa5.44□□□□□ -1.54
KCNMA1-228ENST00000638223 ALMS1Q8TCU4 4167 aa5.42□□□□□ -1.54
KCNMA1-228ENST00000638223 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
KCNMA1-228ENST00000638223 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
KCNMA1-228ENST00000638223 R4GN34 69 aa5.42□□□□□ -1.54
KCNMA1-228ENST00000638223 DNAH11Q96DT5 4516 aa5.4□□□□□ -1.54
KCNMA1-228ENST00000638223 DMAC1Q96GE9 116 aa5.4□□□□□ -1.55
KCNMA1-228ENST00000638223 DNAH17Q9UFH2 4485 aa5.38□□□□□ -1.55
KCNMA1-228ENST00000638223 XP32Q5T750 250 aa5.36□□□□□ -1.55
KCNMA1-228ENST00000638223 A8MUU9 505 aa5.36□□□□□ -1.55
KCNMA1-228ENST00000638223 H1FX-AS1Q4G0G2 97 aa5.35□□□□□ -1.55
KCNMA1-228ENST00000638223 RYR3Q15413 4870 aa5.34□□□□□ -1.55
KCNMA1-228ENST00000638223 RYR2Q92736 4967 aa5.34□□□□□ -1.55
KCNMA1-228ENST00000638223 C20orf166-AS1Q96NR2 134 aa5.34□□□□□ -1.55
KCNMA1-228ENST00000638223 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
KCNMA1-228ENST00000638223 M0QZ58 72 aa5.33□□□□□ -1.56
KCNMA1-228ENST00000638223 LINC01558Q9Y6Z2 57 aa5.33□□□□□ -1.56
KCNMA1-228ENST00000638223 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
KCNMA1-228ENST00000638223 Q1T7F1 81 aa5.32□□□□□ -1.56
KCNMA1-228ENST00000638223 CRIPTQ9P021 101 aa5.32□□□□□ -1.56
KCNMA1-228ENST00000638223 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
KCNMA1-228ENST00000638223 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
KCNMA1-228ENST00000638223 PKHD1P08F94 4074 aa5.29□□□□□ -1.56
KCNMA1-228ENST00000638223 TPRXLQ17RH7 258 aa5.29□□□□□ -1.56
KCNMA1-228ENST00000638223 LCA10Q71F78 164 aa5.29□□□□□ -1.56
KCNMA1-228ENST00000638223 DNAH8Q96JB1 4490 aa5.28□□□□□ -1.56
KCNMA1-228ENST00000638223 KRTAP13-3Q3SY46 172 aa5.26□□□□□ -1.57
KCNMA1-228ENST00000638223 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
KCNMA1-228ENST00000638223 Q5VV11 94 aa5.22□□□□□ -1.57
KCNMA1-228ENST00000638223 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
KCNMA1-228ENST00000638223 PLAC4Q8WY50 150 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms