RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
UPF3B-205ENST00000636792 DMBT1Q9UGM3 2413 aaPredicted RBP3.87□□□□□ -1.79
UPF3B-205ENST00000636792 TRBV7-7A0A0K0K1E9 115 aa3.87□□□□□ -1.79
UPF3B-205ENST00000636792 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
UPF3B-205ENST00000636792 TNXBP22105 4242 aa3.86□□□□□ -1.79
UPF3B-205ENST00000636792 CCKP06307 115 aa3.85□□□□□ -1.79
UPF3B-205ENST00000636792 Q6ZQT0 140 aa3.85□□□□□ -1.79
UPF3B-205ENST00000636792 LRP1Q07954 4544 aaKnown RBP3.85□□□□□ -1.79
UPF3B-205ENST00000636792 A0A1B0GV90 55 aa3.83□□□□□ -1.8
UPF3B-205ENST00000636792 A0A1W2PNM2 257 aa3.83□□□□□ -1.8
UPF3B-205ENST00000636792 MTURNQ8N3F0 131 aa3.83□□□□□ -1.8
UPF3B-205ENST00000636792 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
UPF3B-205ENST00000636792 A0A087WSZ3 146 aa3.82□□□□□ -1.8
UPF3B-205ENST00000636792 ETDBQ3ZM63 59 aa3.81□□□□□ -1.8
UPF3B-205ENST00000636792 FAM240AA0A1B0GVK7 77 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 J3KT08 172 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 ACYP1P07311 99 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 TPRXLQ17RH7 258 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 HRCT1Q6UXD1 115 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 VPS25Q9BRG1 176 aa3.8□□□□□ -1.8
UPF3B-205ENST00000636792 A0A1B0GV72 72 aa3.79□□□□□ -1.8
UPF3B-205ENST00000636792 C1orf195Q5TG92 126 aa3.79□□□□□ -1.8
UPF3B-205ENST00000636792 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
UPF3B-205ENST00000636792 J3QR89 54 aa3.78□□□□□ -1.8
UPF3B-205ENST00000636792 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
UPF3B-205ENST00000636792 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
UPF3B-205ENST00000636792 UBL5Q9BZL1 73 aa3.77□□□□□ -1.81
UPF3B-205ENST00000636792 LINC00472Q9H8W2 130 aa3.77□□□□□ -1.81
UPF3B-205ENST00000636792 IGLV7-46A0A075B6I9 117 aa3.76□□□□□ -1.81
UPF3B-205ENST00000636792 PRR4Q16378 134 aa3.76□□□□□ -1.81
UPF3B-205ENST00000636792 NREPQ16612 68 aa3.76□□□□□ -1.81
UPF3B-205ENST00000636792 Q96NJ1 140 aa3.76□□□□□ -1.81
UPF3B-205ENST00000636792 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
UPF3B-205ENST00000636792 C8orf87E5RJ46 101 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 NDUFB1O75438 58 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 ATP5EP2Q5VTU8 51 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 Q6ZVQ6 151 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 SIGMAR1Q99720 223 aa3.74□□□□□ -1.81
UPF3B-205ENST00000636792 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
UPF3B-205ENST00000636792 LINC00846Q9NV44 126 aa3.73□□□□□ -1.81
UPF3B-205ENST00000636792 A8MWP4 228 aa3.72□□□□□ -1.81
UPF3B-205ENST00000636792 BPY2O14599 106 aa3.72□□□□□ -1.81
UPF3B-205ENST00000636792 IGKV2-30P06310 120 aa3.72□□□□□ -1.81
UPF3B-205ENST00000636792 CXCL6P80162 114 aa3.72□□□□□ -1.81
UPF3B-205ENST00000636792 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
UPF3B-205ENST00000636792 K7ERU9 68 aa3.71□□□□□ -1.82
UPF3B-205ENST00000636792 LINC00313P59037 77 aa3.69□□□□□ -1.82
UPF3B-205ENST00000636792 PRR15Q8IV56 129 aa3.69□□□□□ -1.82
UPF3B-205ENST00000636792 HERC1Q15751 4861 aa3.68□□□□□ -1.82
UPF3B-205ENST00000636792 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
UPF3B-205ENST00000636792 DSCR10P59022 87 aa3.68□□□□□ -1.82
UPF3B-205ENST00000636792 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
UPF3B-205ENST00000636792 IGKV3D-7A0A0C4DH55 119 aa3.67□□□□□ -1.82
UPF3B-205ENST00000636792 Q75L30 129 aa3.67□□□□□ -1.82
UPF3B-205ENST00000636792 IGHV6-1A0A0B4J1U7 121 aa3.66□□□□□ -1.82
UPF3B-205ENST00000636792 K7EQZ3 153 aa3.66□□□□□ -1.82
UPF3B-205ENST00000636792 SEC61BP60468 96 aaKnown RBP3.66□□□□□ -1.82
UPF3B-205ENST00000636792 DEFB116Q30KQ4 102 aa3.66□□□□□ -1.82
UPF3B-205ENST00000636792 C20orf166-AS1Q96NR2 134 aa3.66□□□□□ -1.82
UPF3B-205ENST00000636792 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
UPF3B-205ENST00000636792 A8MUU9 505 aa3.65□□□□□ -1.83
UPF3B-205ENST00000636792 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.83
UPF3B-205ENST00000636792 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
UPF3B-205ENST00000636792 MMP24-AS1A0A0U1RRL7 71 aa3.64□□□□□ -1.83
UPF3B-205ENST00000636792 C9orf92A6NGG3 77 aa3.64□□□□□ -1.83
UPF3B-205ENST00000636792 KRTAP16-1A8MUX0 517 aa3.64□□□□□ -1.83
UPF3B-205ENST00000636792 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
UPF3B-205ENST00000636792 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
UPF3B-205ENST00000636792 MRPL34Q9BQ48 92 aaKnown RBP3.63□□□□□ -1.83
UPF3B-205ENST00000636792 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
UPF3B-205ENST00000636792 CASC2Q6XLA1 102 aa3.62□□□□□ -1.83
UPF3B-205ENST00000636792 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
UPF3B-205ENST00000636792 NOTCH2NLQ7Z3S9 236 aa3.59□□□□□ -1.83
UPF3B-205ENST00000636792 Q8N9L7 120 aa3.59□□□□□ -1.83
UPF3B-205ENST00000636792 TP53AIP1Q9HCN2 124 aa3.59□□□□□ -1.83
UPF3B-205ENST00000636792 HIST1H4AP62805 103 aaKnown RBP3.58□□□□□ -1.84
UPF3B-205ENST00000636792 LRP2P98164 4655 aa3.58□□□□□ -1.84
UPF3B-205ENST00000636792 WFDC13Q8IUB5 93 aa3.57□□□□□ -1.84
UPF3B-205ENST00000636792 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
UPF3B-205ENST00000636792 LPAP08519 4548 aa3.55□□□□□ -1.84
UPF3B-205ENST00000636792 A0A0U1RQV1 116 aa3.55□□□□□ -1.84
UPF3B-205ENST00000636792 NDUFS5O43920 106 aa3.55□□□□□ -1.84
UPF3B-205ENST00000636792 PCOTHQ58A44 107 aa3.55□□□□□ -1.84
UPF3B-205ENST00000636792 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
UPF3B-205ENST00000636792 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
UPF3B-205ENST00000636792 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
UPF3B-205ENST00000636792 IGKV2D-30A0A075B6S6 120 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 A0A087WVE0 104 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 ATOX1O00244 68 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 UQCRQO14949 82 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 MT-ATP8P03928 68 aa3.52□□□□□ -1.85
UPF3B-205ENST00000636792 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
UPF3B-205ENST00000636792 H3BPC8 53 aa3.5□□□□□ -1.85
UPF3B-205ENST00000636792 MUC2Q02817 5179 aa3.49□□□□□ -1.85
UPF3B-205ENST00000636792 FAM236AA0A1B0GUQ0 79 aa3.49□□□□□ -1.85
UPF3B-205ENST00000636792 FAM236BA0A1B0GV22 79 aa3.49□□□□□ -1.85
UPF3B-205ENST00000636792 LOC101927531A0A1B0GV80 90 aa3.49□□□□□ -1.85
UPF3B-205ENST00000636792 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms