RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 DSCR10P59022 87 aa7.47□□□□□ -1.21
SYNGAP1-207ENST00000628646 PMAIP1Q13794 54 aa7.47□□□□□ -1.21
SYNGAP1-207ENST00000628646 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
SYNGAP1-207ENST00000628646 hDV103S1A0JD37 113 aa7.46□□□□□ -1.22
SYNGAP1-207ENST00000628646 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
SYNGAP1-207ENST00000628646 H0Y9P7 68 aa7.45□□□□□ -1.22
SYNGAP1-207ENST00000628646 DNAH5Q8TE73 4624 aa7.45□□□□□ -1.22
SYNGAP1-207ENST00000628646 KRTAP13-1Q8IUC0 172 aa7.44□□□□□ -1.22
SYNGAP1-207ENST00000628646 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
SYNGAP1-207ENST00000628646 FAM229BQ4G0N7 80 aa7.44□□□□□ -1.22
SYNGAP1-207ENST00000628646 Q5XG85 94 aa7.42□□□□□ -1.22
SYNGAP1-207ENST00000628646 SPAG11AQ6PDA7 123 aa7.42□□□□□ -1.22
SYNGAP1-207ENST00000628646 CD164Q04900 197 aa7.41□□□□□ -1.22
SYNGAP1-207ENST00000628646 A0A087X002 238 aa7.39□□□□□ -1.23
SYNGAP1-207ENST00000628646 PKD1P98161 4303 aa7.39□□□□□ -1.23
SYNGAP1-207ENST00000628646 LINC00483Q53H64 154 aa7.39□□□□□ -1.23
SYNGAP1-207ENST00000628646 C8orf87E5RJ46 101 aa7.39□□□□□ -1.23
SYNGAP1-207ENST00000628646 C1orf64Q8NEQ6 169 aa7.38□□□□□ -1.23
SYNGAP1-207ENST00000628646 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
SYNGAP1-207ENST00000628646 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 C8orf17Q9NRJ1 99 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 SACSQ9NZJ4 4579 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 FAT2Q9NYQ8 4349 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 PSPHP1O15172 72 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 RETNLBQ9BQ08 111 aa7.37□□□□□ -1.23
SYNGAP1-207ENST00000628646 HYDINQ4G0P3 5121 aa7.36□□□□□ -1.23
SYNGAP1-207ENST00000628646 H3BS24 57 aa7.36□□□□□ -1.23
SYNGAP1-207ENST00000628646 SPINK1P00995 79 aa7.36□□□□□ -1.23
SYNGAP1-207ENST00000628646 LINC00472Q9H8W2 130 aa7.36□□□□□ -1.23
SYNGAP1-207ENST00000628646 KMT2CQ8NEZ4 4911 aaKnown RBP7.36□□□□□ -1.23
SYNGAP1-207ENST00000628646 MRPL34Q9BQ48 92 aaKnown RBP7.35□□□□□ -1.23
SYNGAP1-207ENST00000628646 ZCCHC13Q8WW36 166 aaKnown RBP7.32□□□□□ -1.24
SYNGAP1-207ENST00000628646 RYR2Q92736 4967 aa7.31□□□□□ -1.24
SYNGAP1-207ENST00000628646 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
SYNGAP1-207ENST00000628646 LINC00313P59037 77 aa7.31□□□□□ -1.24
SYNGAP1-207ENST00000628646 KRTAP13-2Q52LG2 175 aa7.27□□□□□ -1.25
SYNGAP1-207ENST00000628646 Q96NJ1 140 aa7.27□□□□□ -1.25
SYNGAP1-207ENST00000628646 LRP1BQ9NZR2 4599 aa7.27□□□□□ -1.25
SYNGAP1-207ENST00000628646 LOC101927531A0A1B0GV80 90 aa7.26□□□□□ -1.25
SYNGAP1-207ENST00000628646 PCOTHQ58A44 107 aa7.26□□□□□ -1.25
SYNGAP1-207ENST00000628646 MMP24-AS1A0A0U1RRL7 71 aa7.25□□□□□ -1.25
SYNGAP1-207ENST00000628646 C9orf92A6NGG3 77 aa7.25□□□□□ -1.25
SYNGAP1-207ENST00000628646 FP248Q71RG6 208 aaPredicted RBP7.25□□□□□ -1.25
SYNGAP1-207ENST00000628646 IGLV7-46A0A075B6I9 117 aa7.24□□□□□ -1.25
SYNGAP1-207ENST00000628646 KRTAP1-4P0C5Y4 121 aa7.24□□□□□ -1.25
SYNGAP1-207ENST00000628646 DYNC1H1Q14204 4646 aaKnown RBP7.23□□□□□ -1.25
SYNGAP1-207ENST00000628646 SPANXA2-OT1Q8N9U9 137 aa7.23□□□□□ -1.25
SYNGAP1-207ENST00000628646 ASB16-AS1Q495Z4 193 aa7.21□□□□□ -1.26
SYNGAP1-207ENST00000628646 A6NED7 52 aa7.2□□□□□ -1.26
SYNGAP1-207ENST00000628646 VPS13BQ7Z7G8 4022 aa7.2□□□□□ -1.26
SYNGAP1-207ENST00000628646 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
SYNGAP1-207ENST00000628646 CYP4F30PQ9H0H9 118 aa7.17□□□□□ -1.26
SYNGAP1-207ENST00000628646 RYR3Q15413 4870 aa7.17□□□□□ -1.26
SYNGAP1-207ENST00000628646 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
SYNGAP1-207ENST00000628646 KIAA1109Q2LD37 5005 aa7.16□□□□□ -1.26
SYNGAP1-207ENST00000628646 ACYP2P14621 99 aa7.13□□□□□ -1.27
SYNGAP1-207ENST00000628646 PKHD1P08F94 4074 aa7.13□□□□□ -1.27
SYNGAP1-207ENST00000628646 FAT1Q14517 4588 aa7.11□□□□□ -1.27
SYNGAP1-207ENST00000628646 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
SYNGAP1-207ENST00000628646 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
SYNGAP1-207ENST00000628646 PRR15LQ9BU68 103 aa7.09□□□□□ -1.27
SYNGAP1-207ENST00000628646 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
SYNGAP1-207ENST00000628646 KRTAP10-4P60372 401 aaPredicted RBP7.08□□□□□ -1.28
SYNGAP1-207ENST00000628646 NOTCH2NLQ7Z3S9 236 aa7.07□□□□□ -1.28
SYNGAP1-207ENST00000628646 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
SYNGAP1-207ENST00000628646 COA5Q86WW8 74 aa7.07□□□□□ -1.28
SYNGAP1-207ENST00000628646 A8MUN3 132 aa7.05□□□□□ -1.28
SYNGAP1-207ENST00000628646 A8MU10 97 aa7.04□□□□□ -1.28
SYNGAP1-207ENST00000628646 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
SYNGAP1-207ENST00000628646 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
SYNGAP1-207ENST00000628646 C7orf65Q6ZTY9 151 aa7□□□□□ -1.29
SYNGAP1-207ENST00000628646 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
SYNGAP1-207ENST00000628646 BIRC6Q9NR09 4857 aa6.99□□□□□ -1.29
SYNGAP1-207ENST00000628646 Q1T7F1 81 aa6.98□□□□□ -1.29
SYNGAP1-207ENST00000628646 RYR1P21817 5038 aa6.98□□□□□ -1.29
SYNGAP1-207ENST00000628646 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
SYNGAP1-207ENST00000628646 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
SYNGAP1-207ENST00000628646 K7ERS5 55 aa6.97□□□□□ -1.29
SYNGAP1-207ENST00000628646 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.29
SYNGAP1-207ENST00000628646 Q5W150 140 aa6.95□□□□□ -1.3
SYNGAP1-207ENST00000628646 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
SYNGAP1-207ENST00000628646 Q8N9P0 234 aaPredicted RBP6.94□□□□□ -1.3
SYNGAP1-207ENST00000628646 PRAC1Q96KF2 57 aa6.94□□□□□ -1.3
SYNGAP1-207ENST00000628646 HRES1P13985 223 aa6.93□□□□□ -1.3
SYNGAP1-207ENST00000628646 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
SYNGAP1-207ENST00000628646 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
SYNGAP1-207ENST00000628646 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
SYNGAP1-207ENST00000628646 A0A1B0GU69 56 aa6.89□□□□□ -1.31
SYNGAP1-207ENST00000628646 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
SYNGAP1-207ENST00000628646 HSPG2P98160 4391 aa6.84□□□□□ -1.31
SYNGAP1-207ENST00000628646 DMAC1Q96GE9 116 aa6.83□□□□□ -1.32
SYNGAP1-207ENST00000628646 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
SYNGAP1-207ENST00000628646 HERC2O95714 4834 aa6.82□□□□□ -1.32
SYNGAP1-207ENST00000628646 Q5VV11 94 aa6.81□□□□□ -1.32
SYNGAP1-207ENST00000628646 TPRXLQ17RH7 258 aa6.8□□□□□ -1.32
SYNGAP1-207ENST00000628646 LCA10Q71F78 164 aa6.79□□□□□ -1.32
SYNGAP1-207ENST00000628646 XP32Q5T750 250 aa6.77□□□□□ -1.33
SYNGAP1-207ENST00000628646 Q75L30 129 aa6.77□□□□□ -1.33
SYNGAP1-207ENST00000628646 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
SYNGAP1-207ENST00000628646 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms