RNA–Protein interactions for RNA: ENST00000628515.2

NRXN1-229, Transcript of neurexin 1, humanhuman

TSL 5 BASIC

Gene NRXN1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-229ENST00000628515 A0A1B0GVX0 72 aa9.7□□□□□ -0.86
NRXN1-229ENST00000628515 HRES1P13985 223 aa9.7□□□□□ -0.86
NRXN1-229ENST00000628515 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
NRXN1-229ENST00000628515 A6NN06 94 aa9.69□□□□□ -0.86
NRXN1-229ENST00000628515 SPINK7P58062 85 aa9.69□□□□□ -0.86
NRXN1-229ENST00000628515 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
NRXN1-229ENST00000628515 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
NRXN1-229ENST00000628515 KRTAP13-1Q8IUC0 172 aa9.66□□□□□ -0.86
NRXN1-229ENST00000628515 CDC42SE1Q9NRR8 79 aa9.65□□□□□ -0.86
NRXN1-229ENST00000628515 C8orf87E5RJ46 101 aa9.65□□□□□ -0.87
NRXN1-229ENST00000628515 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
NRXN1-229ENST00000628515 Q6ZR54 194 aa9.64□□□□□ -0.87
NRXN1-229ENST00000628515 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
NRXN1-229ENST00000628515 H3BS24 57 aa9.63□□□□□ -0.87
NRXN1-229ENST00000628515 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
NRXN1-229ENST00000628515 C7orf65Q6ZTY9 151 aa9.61□□□□□ -0.87
NRXN1-229ENST00000628515 VPS13DQ5THJ4 4388 aa9.61□□□□□ -0.87
NRXN1-229ENST00000628515 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
NRXN1-229ENST00000628515 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
NRXN1-229ENST00000628515 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
NRXN1-229ENST00000628515 WWC2-AS2Q96NR7 200 aa9.6□□□□□ -0.87
NRXN1-229ENST00000628515 DNAH2Q9P225 4427 aa9.59□□□□□ -0.87
NRXN1-229ENST00000628515 Q5W150 140 aa9.59□□□□□ -0.87
NRXN1-229ENST00000628515 SPACA4Q8TDM5 124 aa9.58□□□□□ -0.88
NRXN1-229ENST00000628515 ZNF706Q9Y5V0 76 aaPredicted RBP9.57□□□□□ -0.88
NRXN1-229ENST00000628515 HYDINQ4G0P3 5121 aa9.56□□□□□ -0.88
NRXN1-229ENST00000628515 DYNC2H1Q8NCM8 4307 aaKnown RBP9.55□□□□□ -0.88
NRXN1-229ENST00000628515 LINC00313P59037 77 aa9.53□□□□□ -0.88
NRXN1-229ENST00000628515 Q6ZRN7 208 aaPredicted RBP9.53□□□□□ -0.88
NRXN1-229ENST00000628515 LINC00483Q53H64 154 aa9.52□□□□□ -0.88
NRXN1-229ENST00000628515 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.89
NRXN1-229ENST00000628515 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
NRXN1-229ENST00000628515 A0A087WTM6 91 aa9.5□□□□□ -0.89
NRXN1-229ENST00000628515 RTL8CO15255 209 aa9.5□□□□□ -0.89
NRXN1-229ENST00000628515 ZNF861PO60384 105 aa9.5□□□□□ -0.89
NRXN1-229ENST00000628515 FRAS1Q86XX4 4008 aa9.49□□□□□ -0.89
NRXN1-229ENST00000628515 DNAH6Q9C0G6 4158 aa9.49□□□□□ -0.89
NRXN1-229ENST00000628515 C1orf134Q5TEV5 83 aa9.47□□□□□ -0.89
NRXN1-229ENST00000628515 HECTD4Q9Y4D8 3996 aa9.47□□□□□ -0.89
NRXN1-229ENST00000628515 ACYP2P14621 99 aa9.46□□□□□ -0.89
NRXN1-229ENST00000628515 DNAH11Q96DT5 4516 aa9.42□□□□□ -0.9
NRXN1-229ENST00000628515 A0A1B0GU69 56 aa9.4□□□□□ -0.91
NRXN1-229ENST00000628515 KRTAP10-2P60368 255 aa9.4□□□□□ -0.91
NRXN1-229ENST00000628515 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
NRXN1-229ENST00000628515 IGLV7-43P04211 117 aa9.35□□□□□ -0.91
NRXN1-229ENST00000628515 IGKV2D-30A0A075B6S6 120 aa9.35□□□□□ -0.91
NRXN1-229ENST00000628515 IGKV2-30P06310 120 aa9.35□□□□□ -0.91
NRXN1-229ENST00000628515 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
NRXN1-229ENST00000628515 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
NRXN1-229ENST00000628515 DMAC1Q96GE9 116 aa9.32□□□□□ -0.92
NRXN1-229ENST00000628515 DNAH8Q96JB1 4490 aa9.31□□□□□ -0.92
NRXN1-229ENST00000628515 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
NRXN1-229ENST00000628515 PKHD1P08F94 4074 aa9.28□□□□□ -0.92
NRXN1-229ENST00000628515 SPINK1P00995 79 aa9.28□□□□□ -0.92
NRXN1-229ENST00000628515 DNAH5Q8TE73 4624 aa9.26□□□□□ -0.93
NRXN1-229ENST00000628515 MIR22HGQ0VDD5 57 aa9.24□□□□□ -0.93
NRXN1-229ENST00000628515 SSBP3-AS1Q7Z2R9 100 aa9.24□□□□□ -0.93
NRXN1-229ENST00000628515 KMT2CQ8NEZ4 4911 aaKnown RBP9.23□□□□□ -0.93
NRXN1-229ENST00000628515 KRTAP10-1P60331 282 aa9.22□□□□□ -0.93
NRXN1-229ENST00000628515 LRP1BQ9NZR2 4599 aa9.21□□□□□ -0.93
NRXN1-229ENST00000628515 UQCR11O14957 56 aa9.2□□□□□ -0.94
NRXN1-229ENST00000628515 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
NRXN1-229ENST00000628515 CSAG1Q6PB30 78 aa9.2□□□□□ -0.94
NRXN1-229ENST00000628515 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
NRXN1-229ENST00000628515 KRTAP13-2Q52LG2 175 aa9.17□□□□□ -0.94
NRXN1-229ENST00000628515 SMR3BP02814 79 aaPredicted RBP9.16□□□□□ -0.94
NRXN1-229ENST00000628515 SPATA8Q6RVD6 105 aa9.16□□□□□ -0.94
NRXN1-229ENST00000628515 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
NRXN1-229ENST00000628515 Q8N1X5 172 aa9.15□□□□□ -0.94
NRXN1-229ENST00000628515 PKD1P98161 4303 aa9.12□□□□□ -0.95
NRXN1-229ENST00000628515 PLA2G1BP04054 148 aaKnown RBP9.12□□□□□ -0.95
NRXN1-229ENST00000628515 FLG2Q5D862 2391 aaPredicted RBP9.11□□□□□ -0.95
NRXN1-229ENST00000628515 ALMS1Q8TCU4 4167 aa9.1□□□□□ -0.95
NRXN1-229ENST00000628515 KRTAP16-1A8MUX0 517 aa9.08□□□□□ -0.96
NRXN1-229ENST00000628515 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
NRXN1-229ENST00000628515 FAT1Q14517 4588 aa9.06□□□□□ -0.96
NRXN1-229ENST00000628515 TYMSOSQ8TAI1 123 aa8.99□□□□□ -0.97
NRXN1-229ENST00000628515 DYNC1H1Q14204 4646 aaKnown RBP8.99□□□□□ -0.97
NRXN1-229ENST00000628515 RYR2Q92736 4967 aa8.95□□□□□ -0.98
NRXN1-229ENST00000628515 KRTAP1-4P0C5Y4 121 aa8.94□□□□□ -0.98
NRXN1-229ENST00000628515 RYR3Q15413 4870 aa8.92□□□□□ -0.98
NRXN1-229ENST00000628515 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
NRXN1-229ENST00000628515 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
NRXN1-229ENST00000628515 Q6ZSA8 131 aa8.9□□□□□ -0.98
NRXN1-229ENST00000628515 H0YAA0 97 aa8.83□□□□□ -1
NRXN1-229ENST00000628515 LINC00304Q8N9R0 145 aa8.82□□□□□ -1
NRXN1-229ENST00000628515 DMBT1Q9UGM3 2413 aaPredicted RBP8.81□□□□□ -1
NRXN1-229ENST00000628515 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
NRXN1-229ENST00000628515 A0A1B0GU33 70 aa8.78□□□□□ -1
NRXN1-229ENST00000628515 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
NRXN1-229ENST00000628515 ROMO1P60602 79 aa8.74□□□□□ -1.01
NRXN1-229ENST00000628515 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
NRXN1-229ENST00000628515 LRP1Q07954 4544 aaKnown RBP8.74□□□□□ -1.01
NRXN1-229ENST00000628515 A8MUU9 505 aa8.73□□□□□ -1.01
NRXN1-229ENST00000628515 H1FX-AS1Q4G0G2 97 aa8.69□□□□□ -1.02
NRXN1-229ENST00000628515 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
NRXN1-229ENST00000628515 EPPK1P58107 5090 aaKnown RBP8.66□□□□□ -1.02
NRXN1-229ENST00000628515 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
NRXN1-229ENST00000628515 MYCBP2O75592 4640 aa8.64□□□□□ -1.03
NRXN1-229ENST00000628515 P0C880 135 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms