RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NREPQ16612 68 aa5.62□□□□□ -1.51
PDLIM5-223ENST00000627587 ATP5EP2Q5VTU8 51 aa5.62□□□□□ -1.51
PDLIM5-223ENST00000627587 Q6Q795 121 aa5.62□□□□□ -1.51
PDLIM5-223ENST00000627587 SPINK6Q6UWN8 80 aa5.62□□□□□ -1.51
PDLIM5-223ENST00000627587 A0A087WSZ3 146 aa5.61□□□□□ -1.51
PDLIM5-223ENST00000627587 IGKV3D-7A0A0C4DH55 119 aa5.61□□□□□ -1.51
PDLIM5-223ENST00000627587 TRBV7-7A0A0K0K1E9 115 aa5.61□□□□□ -1.51
PDLIM5-223ENST00000627587 FAM229BQ4G0N7 80 aa5.61□□□□□ -1.51
PDLIM5-223ENST00000627587 IMUPQ9GZP8 106 aa5.6□□□□□ -1.51
PDLIM5-223ENST00000627587 A0A087X002 238 aa5.6□□□□□ -1.51
PDLIM5-223ENST00000627587 TNXBP22105 4242 aa5.6□□□□□ -1.51
PDLIM5-223ENST00000627587 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
PDLIM5-223ENST00000627587 SSBP3-AS1Q7Z2R9 100 aa5.59□□□□□ -1.51
PDLIM5-223ENST00000627587 PRO0628Q9UI54 55 aa5.59□□□□□ -1.51
PDLIM5-223ENST00000627587 CXCL6P80162 114 aa5.58□□□□□ -1.52
PDLIM5-223ENST00000627587 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
PDLIM5-223ENST00000627587 BPY2O14599 106 aa5.57□□□□□ -1.52
PDLIM5-223ENST00000627587 HRCT1Q6UXD1 115 aa5.57□□□□□ -1.52
PDLIM5-223ENST00000627587 RNF213Q63HN8 5207 aa5.56□□□□□ -1.52
PDLIM5-223ENST00000627587 LRP2P98164 4655 aa5.56□□□□□ -1.52
PDLIM5-223ENST00000627587 HIST1H4AP62805 103 aaKnown RBP5.56□□□□□ -1.52
PDLIM5-223ENST00000627587 CD164Q04900 197 aa5.55□□□□□ -1.52
PDLIM5-223ENST00000627587 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
PDLIM5-223ENST00000627587 KRTAP10-8P60410 259 aa5.54□□□□□ -1.52
PDLIM5-223ENST00000627587 TYMSOSQ8TAI1 123 aa5.53□□□□□ -1.52
PDLIM5-223ENST00000627587 A0A087WVE0 104 aa5.52□□□□□ -1.53
PDLIM5-223ENST00000627587 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
PDLIM5-223ENST00000627587 FAM236AA0A1B0GUQ0 79 aa5.51□□□□□ -1.53
PDLIM5-223ENST00000627587 FAM236BA0A1B0GV22 79 aa5.51□□□□□ -1.53
PDLIM5-223ENST00000627587 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
PDLIM5-223ENST00000627587 PRR26Q8N8Z3 221 aa5.51□□□□□ -1.53
PDLIM5-223ENST00000627587 C4orf26Q17RF5 130 aa5.5□□□□□ -1.53
PDLIM5-223ENST00000627587 Q8N9L7 120 aa5.5□□□□□ -1.53
PDLIM5-223ENST00000627587 Q96NJ1 140 aa5.5□□□□□ -1.53
PDLIM5-223ENST00000627587 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
PDLIM5-223ENST00000627587 DSCR10P59022 87 aa5.49□□□□□ -1.53
PDLIM5-223ENST00000627587 IGKV4-1P06312 121 aa5.49□□□□□ -1.53
PDLIM5-223ENST00000627587 K7EQZ3 153 aa5.47□□□□□ -1.53
PDLIM5-223ENST00000627587 C1orf195Q5TG92 126 aa5.47□□□□□ -1.53
PDLIM5-223ENST00000627587 LIMD2Q9BT23 127 aa5.47□□□□□ -1.53
PDLIM5-223ENST00000627587 A8MWP4 228 aa5.46□□□□□ -1.54
PDLIM5-223ENST00000627587 SPINK1P00995 79 aa5.46□□□□□ -1.54
PDLIM5-223ENST00000627587 ASB16-AS1Q495Z4 193 aa5.46□□□□□ -1.54
PDLIM5-223ENST00000627587 Q5XG85 94 aa5.46□□□□□ -1.54
PDLIM5-223ENST00000627587 LINC00304Q8N9R0 145 aa5.46□□□□□ -1.54
PDLIM5-223ENST00000627587 SPAG11AQ6PDA7 123 aa5.45□□□□□ -1.54
PDLIM5-223ENST00000627587 NDUFB1O75438 58 aa5.45□□□□□ -1.54
PDLIM5-223ENST00000627587 ATOX1O00244 68 aa5.44□□□□□ -1.54
PDLIM5-223ENST00000627587 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
PDLIM5-223ENST00000627587 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
PDLIM5-223ENST00000627587 HCG22E2RYF7 251 aa5.41□□□□□ -1.54
PDLIM5-223ENST00000627587 UQCRQO14949 82 aa5.4□□□□□ -1.55
PDLIM5-223ENST00000627587 A0A1B0GVX0 72 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 IGHV6-1A0A0B4J1U7 121 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 WFDC13Q8IUB5 93 aa5.39□□□□□ -1.55
PDLIM5-223ENST00000627587 TMEM258P61165 79 aa5.38□□□□□ -1.55
PDLIM5-223ENST00000627587 CASC2Q6XLA1 102 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 LPAP08519 4548 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 A0A0U1RQV1 116 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 MMP24-AS1A0A0U1RRL7 71 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 SERP2Q8N6R1 65 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 C8orf17Q9NRJ1 99 aa5.37□□□□□ -1.55
PDLIM5-223ENST00000627587 NOTCH2NLQ7Z3S9 236 aa5.36□□□□□ -1.55
PDLIM5-223ENST00000627587 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
PDLIM5-223ENST00000627587 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
PDLIM5-223ENST00000627587 COX7CP15954 63 aa5.34□□□□□ -1.55
PDLIM5-223ENST00000627587 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
PDLIM5-223ENST00000627587 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
PDLIM5-223ENST00000627587 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
PDLIM5-223ENST00000627587 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
PDLIM5-223ENST00000627587 PRR4Q16378 134 aa5.32□□□□□ -1.56
PDLIM5-223ENST00000627587 LINC00313P59037 77 aa5.31□□□□□ -1.56
PDLIM5-223ENST00000627587 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
PDLIM5-223ENST00000627587 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-223ENST00000627587 PMAIP1Q13794 54 aa5.3□□□□□ -1.56
PDLIM5-223ENST00000627587 RETNLBQ9BQ08 111 aa5.28□□□□□ -1.56
PDLIM5-223ENST00000627587 NDUFS5O43920 106 aa5.28□□□□□ -1.56
PDLIM5-223ENST00000627587 TP53AIP1Q9HCN2 124 aa5.27□□□□□ -1.57
PDLIM5-223ENST00000627587 KRTAP16-1A8MUX0 517 aa5.26□□□□□ -1.57
PDLIM5-223ENST00000627587 C20orf197Q8N268 126 aa5.26□□□□□ -1.57
PDLIM5-223ENST00000627587 CYSTM1Q9H1C7 97 aa5.25□□□□□ -1.57
PDLIM5-223ENST00000627587 MUC2Q02817 5179 aa5.24□□□□□ -1.57
PDLIM5-223ENST00000627587 FP248Q71RG6 208 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-223ENST00000627587 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
PDLIM5-223ENST00000627587 MP68P56378 58 aa5.23□□□□□ -1.57
PDLIM5-223ENST00000627587 KLKP1Q107X0 134 aa5.23□□□□□ -1.57
PDLIM5-223ENST00000627587 TRAV22A0A0B4J277 110 aa5.22□□□□□ -1.57
PDLIM5-223ENST00000627587 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
PDLIM5-223ENST00000627587 H0Y9P7 68 aa5.22□□□□□ -1.57
PDLIM5-223ENST00000627587 SNURFQ9Y675 71 aa5.22□□□□□ -1.57
PDLIM5-223ENST00000627587 SERP1Q9Y6X1 66 aa5.22□□□□□ -1.57
PDLIM5-223ENST00000627587 SMIM26A0A096LP01 95 aa5.21□□□□□ -1.58
PDLIM5-223ENST00000627587 C9orf92A6NGG3 77 aa5.21□□□□□ -1.58
PDLIM5-223ENST00000627587 MUC17Q685J3 4493 aa5.2□□□□□ -1.58
PDLIM5-223ENST00000627587 H3BPC8 53 aa5.2□□□□□ -1.58
PDLIM5-223ENST00000627587 H3BS24 57 aa5.2□□□□□ -1.58
PDLIM5-223ENST00000627587 BRK1Q8WUW1 75 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms