RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
SND1-IT1-201ENST00000623342 CDK2AP2O75956 126 aa4.94□□□□□ -1.62
SND1-IT1-201ENST00000623342 CIRBP-AS1Q8TBR5 109 aa4.94□□□□□ -1.62
SND1-IT1-201ENST00000623342 CYP4F30PQ9H0H9 118 aa4.94□□□□□ -1.62
SND1-IT1-201ENST00000623342 C1orf64Q8NEQ6 169 aa4.94□□□□□ -1.62
SND1-IT1-201ENST00000623342 RYR2Q92736 4967 aa4.93□□□□□ -1.62
SND1-IT1-201ENST00000623342 FAT1Q14517 4588 aa4.93□□□□□ -1.62
SND1-IT1-201ENST00000623342 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
SND1-IT1-201ENST00000623342 DYNC1H1Q14204 4646 aaKnown RBP4.93□□□□□ -1.62
SND1-IT1-201ENST00000623342 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
SND1-IT1-201ENST00000623342 RYR3Q15413 4870 aa4.92□□□□□ -1.62
SND1-IT1-201ENST00000623342 PRR4Q16378 134 aa4.91□□□□□ -1.62
SND1-IT1-201ENST00000623342 CD164Q04900 197 aa4.91□□□□□ -1.62
SND1-IT1-201ENST00000623342 SPANXA2-OT1Q8N9U9 137 aa4.91□□□□□ -1.62
SND1-IT1-201ENST00000623342 KRTAP21-3Q3LHN1 58 aa4.9□□□□□ -1.62
SND1-IT1-201ENST00000623342 SSBP3-AS1Q7Z2R9 100 aa4.9□□□□□ -1.62
SND1-IT1-201ENST00000623342 MPLKIPQ8TAP9 179 aa4.9□□□□□ -1.63
SND1-IT1-201ENST00000623342 Q6ZSA8 131 aa4.89□□□□□ -1.63
SND1-IT1-201ENST00000623342 MRPL34Q9BQ48 92 aaKnown RBP4.89□□□□□ -1.63
SND1-IT1-201ENST00000623342 NDUFS5O43920 106 aa4.88□□□□□ -1.63
SND1-IT1-201ENST00000623342 KRTAP10-1P60331 282 aa4.88□□□□□ -1.63
SND1-IT1-201ENST00000623342 SPINK6Q6UWN8 80 aa4.88□□□□□ -1.63
SND1-IT1-201ENST00000623342 A0A087X002 238 aa4.87□□□□□ -1.63
SND1-IT1-201ENST00000623342 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
SND1-IT1-201ENST00000623342 LCE2AQ5TA79 106 aaPredicted RBP4.86□□□□□ -1.63
SND1-IT1-201ENST00000623342 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
SND1-IT1-201ENST00000623342 LINC00336Q6ZUF6 198 aa4.85□□□□□ -1.63
SND1-IT1-201ENST00000623342 Q1T7F1 81 aa4.85□□□□□ -1.63
SND1-IT1-201ENST00000623342 IGLV7-46A0A075B6I9 117 aa4.84□□□□□ -1.63
SND1-IT1-201ENST00000623342 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.64
SND1-IT1-201ENST00000623342 C8orf87E5RJ46 101 aa4.83□□□□□ -1.64
SND1-IT1-201ENST00000623342 PCOTHQ58A44 107 aa4.83□□□□□ -1.64
SND1-IT1-201ENST00000623342 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
SND1-IT1-201ENST00000623342 KRTAP1-4P0C5Y4 121 aa4.81□□□□□ -1.64
SND1-IT1-201ENST00000623342 PRO0628Q9UI54 55 aa4.81□□□□□ -1.64
SND1-IT1-201ENST00000623342 V9GYY9 64 aa4.8□□□□□ -1.64
SND1-IT1-201ENST00000623342 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
SND1-IT1-201ENST00000623342 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
SND1-IT1-201ENST00000623342 LINC00313P59037 77 aa4.79□□□□□ -1.64
SND1-IT1-201ENST00000623342 KRTAP13-3Q3SY46 172 aa4.79□□□□□ -1.64
SND1-IT1-201ENST00000623342 Q5W150 140 aa4.79□□□□□ -1.64
SND1-IT1-201ENST00000623342 COA5Q86WW8 74 aa4.79□□□□□ -1.64
SND1-IT1-201ENST00000623342 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
SND1-IT1-201ENST00000623342 LIMD2Q9BT23 127 aa4.78□□□□□ -1.64
SND1-IT1-201ENST00000623342 PSPHP1O15172 72 aa4.77□□□□□ -1.65
SND1-IT1-201ENST00000623342 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
SND1-IT1-201ENST00000623342 PLA2G1BP04054 148 aaKnown RBP4.77□□□□□ -1.65
SND1-IT1-201ENST00000623342 EPPK1P58107 5090 aaKnown RBP4.75□□□□□ -1.65
SND1-IT1-201ENST00000623342 TYMSOSQ8TAI1 123 aa4.75□□□□□ -1.65
SND1-IT1-201ENST00000623342 LRP1Q07954 4544 aaKnown RBP4.75□□□□□ -1.65
SND1-IT1-201ENST00000623342 FAM229AH3BQW9 127 aa4.74□□□□□ -1.65
SND1-IT1-201ENST00000623342 A8MUN3 132 aa4.74□□□□□ -1.65
SND1-IT1-201ENST00000623342 SPINK1P00995 79 aa4.73□□□□□ -1.65
SND1-IT1-201ENST00000623342 HRES1P13985 223 aa4.73□□□□□ -1.65
SND1-IT1-201ENST00000623342 HSPG2P98160 4391 aa4.73□□□□□ -1.65
SND1-IT1-201ENST00000623342 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
SND1-IT1-201ENST00000623342 KRTAP16-1A8MUX0 517 aa4.72□□□□□ -1.65
SND1-IT1-201ENST00000623342 LORP23490 312 aaPredicted RBP4.71□□□□□ -1.65
SND1-IT1-201ENST00000623342 Q5VV11 94 aa4.71□□□□□ -1.65
SND1-IT1-201ENST00000623342 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
SND1-IT1-201ENST00000623342 RETNLBQ9BQ08 111 aa4.7□□□□□ -1.66
SND1-IT1-201ENST00000623342 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
SND1-IT1-201ENST00000623342 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
SND1-IT1-201ENST00000623342 PRR26Q8N8Z3 221 aa4.69□□□□□ -1.66
SND1-IT1-201ENST00000623342 SMR3BP02814 79 aaPredicted RBP4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 RPS29P62273 56 aaKnown RBP4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 MYCBP2O75592 4640 aa4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 ACYP2P14621 99 aa4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 SPAG11AQ6PDA7 123 aa4.68□□□□□ -1.66
SND1-IT1-201ENST00000623342 A0A1B0GVY2 172 aa4.67□□□□□ -1.66
SND1-IT1-201ENST00000623342 CHKB-CPT1BH3BT56 60 aa4.67□□□□□ -1.66
SND1-IT1-201ENST00000623342 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
SND1-IT1-201ENST00000623342 DMAC1Q96GE9 116 aa4.67□□□□□ -1.66
SND1-IT1-201ENST00000623342 Q75L30 129 aa4.66□□□□□ -1.66
SND1-IT1-201ENST00000623342 RYR1P21817 5038 aa4.64□□□□□ -1.67
SND1-IT1-201ENST00000623342 IGKV2D-30A0A075B6S6 120 aa4.63□□□□□ -1.67
SND1-IT1-201ENST00000623342 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
SND1-IT1-201ENST00000623342 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
SND1-IT1-201ENST00000623342 FLG2Q5D862 2391 aaPredicted RBP4.62□□□□□ -1.67
SND1-IT1-201ENST00000623342 TNXBP22105 4242 aa4.61□□□□□ -1.67
SND1-IT1-201ENST00000623342 A6NED7 52 aa4.61□□□□□ -1.67
SND1-IT1-201ENST00000623342 A8MU10 97 aa4.6□□□□□ -1.67
SND1-IT1-201ENST00000623342 LCA10Q71F78 164 aa4.58□□□□□ -1.68
SND1-IT1-201ENST00000623342 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
SND1-IT1-201ENST00000623342 C7orf65Q6ZTY9 151 aa4.57□□□□□ -1.68
SND1-IT1-201ENST00000623342 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
SND1-IT1-201ENST00000623342 C9orf92A6NGG3 77 aa4.55□□□□□ -1.68
SND1-IT1-201ENST00000623342 A8MUU9 505 aa4.55□□□□□ -1.68
SND1-IT1-201ENST00000623342 SPINK7P58062 85 aa4.55□□□□□ -1.68
SND1-IT1-201ENST00000623342 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
SND1-IT1-201ENST00000623342 ATP11AUNQ6ZP68 121 aa4.54□□□□□ -1.68
SND1-IT1-201ENST00000623342 A0A1B0GU69 56 aa4.52□□□□□ -1.69
SND1-IT1-201ENST00000623342 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
SND1-IT1-201ENST00000623342 SPTSSBQ8NFR3 76 aa4.52□□□□□ -1.69
SND1-IT1-201ENST00000623342 DMBT1Q9UGM3 2413 aaPredicted RBP4.52□□□□□ -1.69
SND1-IT1-201ENST00000623342 ABCA13Q86UQ4 5058 aa4.51□□□□□ -1.69
SND1-IT1-201ENST00000623342 Q8N1X5 172 aa4.51□□□□□ -1.69
SND1-IT1-201ENST00000623342 LOC100996750A0A140TA64 210 aa4.48□□□□□ -1.69
SND1-IT1-201ENST00000623342 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms