RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ASB16-AS1Q495Z4 193 aa11.08□□□□□ -0.64
PSPC1-206ENST00000619300 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
PSPC1-206ENST00000619300 A0A0U1RQV1 116 aa11.07□□□□□ -0.64
PSPC1-206ENST00000619300 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
PSPC1-206ENST00000619300 IGHV6-1A0A0B4J1U7 121 aa11.05□□□□□ -0.64
PSPC1-206ENST00000619300 C8orf17Q9NRJ1 99 aa11.04□□□□□ -0.64
PSPC1-206ENST00000619300 TYMSOSQ8TAI1 123 aa11.02□□□□□ -0.65
PSPC1-206ENST00000619300 APOBP04114 4563 aaKnown RBP11□□□□□ -0.65
PSPC1-206ENST00000619300 KRTAP10-4P60372 401 aaPredicted RBP10.99□□□□□ -0.65
PSPC1-206ENST00000619300 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
PSPC1-206ENST00000619300 NOTCH2NLQ7Z3S9 236 aa10.96□□□□□ -0.65
PSPC1-206ENST00000619300 C1orf195Q5TG92 126 aa10.96□□□□□ -0.66
PSPC1-206ENST00000619300 FP248Q71RG6 208 aaPredicted RBP10.96□□□□□ -0.66
PSPC1-206ENST00000619300 LIMD2Q9BT23 127 aa10.96□□□□□ -0.66
PSPC1-206ENST00000619300 PRR26Q8N8Z3 221 aa10.95□□□□□ -0.66
PSPC1-206ENST00000619300 ZCCHC13Q8WW36 166 aaKnown RBP10.95□□□□□ -0.66
PSPC1-206ENST00000619300 MP68P56378 58 aa10.94□□□□□ -0.66
PSPC1-206ENST00000619300 SPINK1P00995 79 aa10.93□□□□□ -0.66
PSPC1-206ENST00000619300 MRPL34Q9BQ48 92 aaKnown RBP10.92□□□□□ -0.66
PSPC1-206ENST00000619300 TP53AIP1Q9HCN2 124 aa10.91□□□□□ -0.66
PSPC1-206ENST00000619300 FAT1Q14517 4588 aa10.9□□□□□ -0.66
PSPC1-206ENST00000619300 H0Y9P7 68 aa10.9□□□□□ -0.66
PSPC1-206ENST00000619300 C8orf87E5RJ46 101 aa10.89□□□□□ -0.67
PSPC1-206ENST00000619300 H3BPC8 53 aa10.87□□□□□ -0.67
PSPC1-206ENST00000619300 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
PSPC1-206ENST00000619300 LINC00208Q96KT6 92 aa10.87□□□□□ -0.67
PSPC1-206ENST00000619300 NDUFS5O43920 106 aa10.87□□□□□ -0.67
PSPC1-206ENST00000619300 PRO0628Q9UI54 55 aa10.87□□□□□ -0.67
PSPC1-206ENST00000619300 TRAV22A0A0B4J277 110 aa10.85□□□□□ -0.67
PSPC1-206ENST00000619300 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
PSPC1-206ENST00000619300 LINC00313P59037 77 aa10.84□□□□□ -0.67
PSPC1-206ENST00000619300 RPS29P62273 56 aaKnown RBP10.83□□□□□ -0.68
PSPC1-206ENST00000619300 FAM229AH3BQW9 127 aa10.82□□□□□ -0.68
PSPC1-206ENST00000619300 RYR3Q15413 4870 aa10.82□□□□□ -0.68
PSPC1-206ENST00000619300 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
PSPC1-206ENST00000619300 CYP4F30PQ9H0H9 118 aa10.74□□□□□ -0.69
PSPC1-206ENST00000619300 Q8N9P0 234 aaPredicted RBP10.72□□□□□ -0.69
PSPC1-206ENST00000619300 Q5VSD8 79 aa10.71□□□□□ -0.69
PSPC1-206ENST00000619300 KRTAP16-1A8MUX0 517 aa10.7□□□□□ -0.7
PSPC1-206ENST00000619300 Q5W150 140 aa10.7□□□□□ -0.7
PSPC1-206ENST00000619300 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
PSPC1-206ENST00000619300 HSPG2P98160 4391 aa10.67□□□□□ -0.7
PSPC1-206ENST00000619300 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
PSPC1-206ENST00000619300 Q1T7F1 81 aa10.66□□□□□ -0.7
PSPC1-206ENST00000619300 SPANXA2-OT1Q8N9U9 137 aa10.65□□□□□ -0.7
PSPC1-206ENST00000619300 MPLKIPQ8TAP9 179 aa10.65□□□□□ -0.71
PSPC1-206ENST00000619300 PRR4Q16378 134 aa10.63□□□□□ -0.71
PSPC1-206ENST00000619300 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
PSPC1-206ENST00000619300 RYR1P21817 5038 aa10.61□□□□□ -0.71
PSPC1-206ENST00000619300 PCOTHQ58A44 107 aa10.6□□□□□ -0.71
PSPC1-206ENST00000619300 BRK1Q8WUW1 75 aa10.6□□□□□ -0.71
PSPC1-206ENST00000619300 KRTAP10-8P60410 259 aa10.58□□□□□ -0.72
PSPC1-206ENST00000619300 KRTAP17-1Q9BYP8 105 aa10.58□□□□□ -0.72
PSPC1-206ENST00000619300 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
PSPC1-206ENST00000619300 Q8N1X5 172 aa10.56□□□□□ -0.72
PSPC1-206ENST00000619300 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
PSPC1-206ENST00000619300 V9GYY9 64 aa10.55□□□□□ -0.72
PSPC1-206ENST00000619300 LRP1Q07954 4544 aaKnown RBP10.49□□□□□ -0.73
PSPC1-206ENST00000619300 KIAA1109Q2LD37 5005 aa10.49□□□□□ -0.73
PSPC1-206ENST00000619300 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
PSPC1-206ENST00000619300 C9orf92A6NGG3 77 aa10.47□□□□□ -0.73
PSPC1-206ENST00000619300 IGKV2-30P06310 120 aa10.47□□□□□ -0.73
PSPC1-206ENST00000619300 TNXBP22105 4242 aa10.46□□□□□ -0.73
PSPC1-206ENST00000619300 EPPK1P58107 5090 aaKnown RBP10.43□□□□□ -0.74
PSPC1-206ENST00000619300 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
PSPC1-206ENST00000619300 A8MUU9 505 aa10.4□□□□□ -0.74
PSPC1-206ENST00000619300 HRES1P13985 223 aa10.38□□□□□ -0.75
PSPC1-206ENST00000619300 FAT3Q8TDW7 4589 aa10.38□□□□□ -0.75
PSPC1-206ENST00000619300 IGKV2D-30A0A075B6S6 120 aa10.38□□□□□ -0.75
PSPC1-206ENST00000619300 MT1HL1P0DM35 61 aa10.36□□□□□ -0.75
PSPC1-206ENST00000619300 COA5Q86WW8 74 aa10.35□□□□□ -0.75
PSPC1-206ENST00000619300 PSPHP1O15172 72 aa10.34□□□□□ -0.75
PSPC1-206ENST00000619300 DMBT1Q9UGM3 2413 aaPredicted RBP10.32□□□□□ -0.76
PSPC1-206ENST00000619300 A8MUN3 132 aa10.31□□□□□ -0.76
PSPC1-206ENST00000619300 Q5VV11 94 aa10.31□□□□□ -0.76
PSPC1-206ENST00000619300 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
PSPC1-206ENST00000619300 Q75L30 129 aa10.28□□□□□ -0.76
PSPC1-206ENST00000619300 MYCBP2O75592 4640 aa10.27□□□□□ -0.77
PSPC1-206ENST00000619300 DMAC1Q96GE9 116 aa10.26□□□□□ -0.77
PSPC1-206ENST00000619300 ACYP2P14621 99 aa10.26□□□□□ -0.77
PSPC1-206ENST00000619300 KRTAP4-5Q9BYR2 181 aa10.21□□□□□ -0.77
PSPC1-206ENST00000619300 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
PSPC1-206ENST00000619300 PMAIP1Q13794 54 aa10.17□□□□□ -0.78
PSPC1-206ENST00000619300 CHKB-CPT1BH3BT56 60 aa10.17□□□□□ -0.78
PSPC1-206ENST00000619300 LINC01558Q9Y6Z2 57 aa10.15□□□□□ -0.78
PSPC1-206ENST00000619300 SPINK7P58062 85 aa10.14□□□□□ -0.79
PSPC1-206ENST00000619300 XP32Q5T750 250 aa10.12□□□□□ -0.79
PSPC1-206ENST00000619300 ATP11AUNQ6ZP68 121 aa10.12□□□□□ -0.79
PSPC1-206ENST00000619300 RPL37P61927 97 aaKnown RBP10.11□□□□□ -0.79
PSPC1-206ENST00000619300 CDC42SE1Q9NRR8 79 aa10.04□□□□□ -0.8
PSPC1-206ENST00000619300 A6NED7 52 aa10.04□□□□□ -0.8
PSPC1-206ENST00000619300 LCA10Q71F78 164 aa10.03□□□□□ -0.8
PSPC1-206ENST00000619300 A8MU10 97 aa10.01□□□□□ -0.81
PSPC1-206ENST00000619300 SEC61GP60059 68 aa10□□□□□ -0.81
PSPC1-206ENST00000619300 TPRXLQ17RH7 258 aa9.99□□□□□ -0.81
PSPC1-206ENST00000619300 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.81
PSPC1-206ENST00000619300 KTN1-AS1Q86SY8 53 aa9.94□□□□□ -0.82
PSPC1-206ENST00000619300 ABCA13Q86UQ4 5058 aa9.92□□□□□ -0.82
PSPC1-206ENST00000619300 A6NN06 94 aa9.92□□□□□ -0.82
PSPC1-206ENST00000619300 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms