RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 ALMS1Q8TCU4 4167 aa2.58□□□□□ -2
SEM1-220ENST00000619259 BPY2O14599 106 aa2.57□□□□□ -2
SEM1-220ENST00000619259 RTL8CO15255 209 aa2.57□□□□□ -2
SEM1-220ENST00000619259 C9orf153Q5TBE3 101 aa2.57□□□□□ -2
SEM1-220ENST00000619259 C1orf134Q5TEV5 83 aa2.57□□□□□ -2
SEM1-220ENST00000619259 HIGD2AQ9BW72 106 aa2.57□□□□□ -2
SEM1-220ENST00000619259 LCE6AA0A183 80 aa2.56□□□□□ -2
SEM1-220ENST00000619259 C3orf84H3BNL1 204 aa2.56□□□□□ -2
SEM1-220ENST00000619259 KLKP1Q107X0 134 aa2.56□□□□□ -2
SEM1-220ENST00000619259 TGP01266 2768 aa2.56□□□□□ -2
SEM1-220ENST00000619259 DNAH8Q96JB1 4490 aa2.56□□□□□ -2
SEM1-220ENST00000619259 KMT2AQ03164 3969 aa2.56□□□□□ -2
SEM1-220ENST00000619259 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
SEM1-220ENST00000619259 TMEM258P61165 79 aa2.55□□□□□ -2
SEM1-220ENST00000619259 ZNF706Q9Y5V0 76 aaPredicted RBP2.55□□□□□ -2
SEM1-220ENST00000619259 HECTD4Q9Y4D8 3996 aa2.54□□□□□ -2
SEM1-220ENST00000619259 RPS28P62857 69 aaKnown RBP2.54□□□□□ -2
SEM1-220ENST00000619259 Q6ZSA8 131 aa2.54□□□□□ -2
SEM1-220ENST00000619259 SCXQ7RTU7 201 aa2.54□□□□□ -2
SEM1-220ENST00000619259 LINC00472Q9H8W2 130 aa2.54□□□□□ -2
SEM1-220ENST00000619259 PSORS1C2Q9UIG4 136 aa2.54□□□□□ -2
SEM1-220ENST00000619259 A0A087WSZ3 146 aa2.53□□□□□ -2
SEM1-220ENST00000619259 NDUFC1O43677 76 aa2.53□□□□□ -2
SEM1-220ENST00000619259 CYSTM1Q9H1C7 97 aa2.53□□□□□ -2
SEM1-220ENST00000619259 SS18L2Q9UHA2 77 aa2.53□□□□□ -2
SEM1-220ENST00000619259 DNAH5Q8TE73 4624 aa2.53□□□□□ -2
SEM1-220ENST00000619259 FAT2Q9NYQ8 4349 aa2.53□□□□□ -2
SEM1-220ENST00000619259 H7BZZ5 65 aa2.52□□□□□ -2.01
SEM1-220ENST00000619259 J3KT08 172 aa2.52□□□□□ -2.01
SEM1-220ENST00000619259 K7EQZ3 153 aa2.52□□□□□ -2.01
SEM1-220ENST00000619259 LY6G6CO95867 125 aa2.52□□□□□ -2.01
SEM1-220ENST00000619259 PRR15Q8IV56 129 aa2.52□□□□□ -2.01
SEM1-220ENST00000619259 SRRM2Q9UQ35 2752 aaKnown RBP2.51□□□□□ -2.01
SEM1-220ENST00000619259 A0A0U1RQV1 116 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 A8MWP4 228 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 HCG22E2RYF7 251 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 IGLV7-43P04211 117 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 ATP5EP56381 51 aaPredicted RBP2.51□□□□□ -2.01
SEM1-220ENST00000619259 CD164Q04900 197 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 ASB16-AS1Q495Z4 193 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 TMEM254Q8TBM7 123 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 DPH3Q96FX2 82 aa2.51□□□□□ -2.01
SEM1-220ENST00000619259 A0A0G2JQZ4 141 aa2.5□□□□□ -2.01
SEM1-220ENST00000619259 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
SEM1-220ENST00000619259 ZCCHC13Q8WW36 166 aaKnown RBP2.5□□□□□ -2.01
SEM1-220ENST00000619259 Q96NJ1 140 aa2.5□□□□□ -2.01
SEM1-220ENST00000619259 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 C5orf47Q569G3 176 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 Q5XG85 94 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 SSBP3-AS1Q7Z2R9 100 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 LRP1BQ9NZR2 4599 aa2.49□□□□□ -2.01
SEM1-220ENST00000619259 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 FRAS1Q86XX4 4008 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 FAM236DA0A1B0GTK5 79 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 A0A1B0GVX0 72 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 H3BPC8 53 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 FAM236CP0DP71 79 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 KRTAP10-1P60331 282 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 MOBPQ13875 183 aa2.48□□□□□ -2.01
SEM1-220ENST00000619259 MMP24-AS1A0A0U1RRL7 71 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 NDUFB1O75438 58 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 LINC00336Q6ZUF6 198 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 SNURFQ9Y675 71 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 SERP1Q9Y6X1 66 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 PKD1P98161 4303 aa2.47□□□□□ -2.01
SEM1-220ENST00000619259 CASC2Q6XLA1 102 aa2.46□□□□□ -2.02
SEM1-220ENST00000619259 TP53AIP1Q9HCN2 124 aa2.46□□□□□ -2.02
SEM1-220ENST00000619259 OXTP01178 125 aa2.45□□□□□ -2.02
SEM1-220ENST00000619259 C8orf17Q9NRJ1 99 aa2.45□□□□□ -2.02
SEM1-220ENST00000619259 hDV103S1A0JD37 113 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 MP68P56378 58 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 KRTAP13-2Q52LG2 175 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 WFDC13Q8IUB5 93 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 SPANXA2-OT1Q8N9U9 137 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 CYP4F30PQ9H0H9 118 aa2.44□□□□□ -2.02
SEM1-220ENST00000619259 DYNC1H1Q14204 4646 aaKnown RBP2.44□□□□□ -2.02
SEM1-220ENST00000619259 TRAV22A0A0B4J277 110 aa2.43□□□□□ -2.02
SEM1-220ENST00000619259 C8orf87E5RJ46 101 aa2.43□□□□□ -2.02
SEM1-220ENST00000619259 RPS29P62273 56 aaKnown RBP2.43□□□□□ -2.02
SEM1-220ENST00000619259 VPS13BQ7Z7G8 4022 aa2.42□□□□□ -2.02
SEM1-220ENST00000619259 SPINK6Q6UWN8 80 aa2.42□□□□□ -2.02
SEM1-220ENST00000619259 MRPL34Q9BQ48 92 aaKnown RBP2.42□□□□□ -2.02
SEM1-220ENST00000619259 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
SEM1-220ENST00000619259 H0Y9P7 68 aa2.41□□□□□ -2.02
SEM1-220ENST00000619259 C1orf195Q5TG92 126 aa2.41□□□□□ -2.02
SEM1-220ENST00000619259 LIMD2Q9BT23 127 aa2.41□□□□□ -2.02
SEM1-220ENST00000619259 PKHD1P08F94 4074 aa2.41□□□□□ -2.02
SEM1-220ENST00000619259 APOBP04114 4563 aaKnown RBP2.4□□□□□ -2.02
SEM1-220ENST00000619259 IGHV6-1A0A0B4J1U7 121 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 SPINK1P00995 79 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 KRTAP10-4P60372 401 aaPredicted RBP2.4□□□□□ -2.03
SEM1-220ENST00000619259 LCE3AQ5TA76 89 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 SPAG11AQ6PDA7 123 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 HRCT1Q6UXD1 115 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 C1orf64Q8NEQ6 169 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 LINC00208Q96KT6 92 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 HYDINQ4G0P3 5121 aa2.4□□□□□ -2.03
SEM1-220ENST00000619259 PKHD1L1Q86WI1 4243 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms