RNA–Protein interactions for RNA: ENST00000618553.1

APOBEC3A-205, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-205ENST00000618553 TNXBP22105 4242 aa7.56□□□□□ -1.2
APOBEC3A-205ENST00000618553 TRBV7-7A0A0K0K1E9 115 aa7.56□□□□□ -1.2
APOBEC3A-205ENST00000618553 KRTAP5-3Q6L8H2 238 aa7.53□□□□□ -1.2
APOBEC3A-205ENST00000618553 FAM240AA0A1B0GVK7 77 aa7.52□□□□□ -1.21
APOBEC3A-205ENST00000618553 ASB16-AS1Q495Z4 193 aa7.52□□□□□ -1.21
APOBEC3A-205ENST00000618553 VPS25Q9BRG1 176 aa7.51□□□□□ -1.21
APOBEC3A-205ENST00000618553 LIMD2Q9BT23 127 aa7.51□□□□□ -1.21
APOBEC3A-205ENST00000618553 A0A087WSZ3 146 aa7.5□□□□□ -1.21
APOBEC3A-205ENST00000618553 SS18L2Q9UHA2 77 aa7.5□□□□□ -1.21
APOBEC3A-205ENST00000618553 HRCT1Q6UXD1 115 aa7.49□□□□□ -1.21
APOBEC3A-205ENST00000618553 ACYP1P07311 99 aa7.48□□□□□ -1.21
APOBEC3A-205ENST00000618553 J3QR89 54 aa7.47□□□□□ -1.21
APOBEC3A-205ENST00000618553 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
APOBEC3A-205ENST00000618553 Q96NJ1 140 aa7.43□□□□□ -1.22
APOBEC3A-205ENST00000618553 LINC00472Q9H8W2 130 aa7.43□□□□□ -1.22
APOBEC3A-205ENST00000618553 K7ERU9 68 aa7.42□□□□□ -1.22
APOBEC3A-205ENST00000618553 C1orf195Q5TG92 126 aa7.42□□□□□ -1.22
APOBEC3A-205ENST00000618553 Q6ZVQ6 151 aa7.41□□□□□ -1.22
APOBEC3A-205ENST00000618553 NREPQ16612 68 aa7.4□□□□□ -1.22
APOBEC3A-205ENST00000618553 UBL5Q9BZL1 73 aa7.4□□□□□ -1.22
APOBEC3A-205ENST00000618553 FP248Q71RG6 208 aaPredicted RBP7.38□□□□□ -1.23
APOBEC3A-205ENST00000618553 J3KT08 172 aa7.37□□□□□ -1.23
APOBEC3A-205ENST00000618553 LPAP08519 4548 aa7.35□□□□□ -1.23
APOBEC3A-205ENST00000618553 ATP5EP2Q5VTU8 51 aa7.33□□□□□ -1.24
APOBEC3A-205ENST00000618553 RETNLBQ9BQ08 111 aa7.33□□□□□ -1.24
APOBEC3A-205ENST00000618553 CDIP1Q9H305 208 aa7.33□□□□□ -1.24
APOBEC3A-205ENST00000618553 IGKV4-1P06312 121 aa7.32□□□□□ -1.24
APOBEC3A-205ENST00000618553 CXCL6P80162 114 aa7.32□□□□□ -1.24
APOBEC3A-205ENST00000618553 LINC00643Q86TS7 51 aa7.32□□□□□ -1.24
APOBEC3A-205ENST00000618553 SIGMAR1Q99720 223 aa7.32□□□□□ -1.24
APOBEC3A-205ENST00000618553 BPY2O14599 106 aa7.31□□□□□ -1.24
APOBEC3A-205ENST00000618553 DSCR10P59022 87 aa7.31□□□□□ -1.24
APOBEC3A-205ENST00000618553 A8MWP4 228 aa7.3□□□□□ -1.24
APOBEC3A-205ENST00000618553 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
APOBEC3A-205ENST00000618553 IGLV7-46A0A075B6I9 117 aa7.26□□□□□ -1.25
APOBEC3A-205ENST00000618553 IGKV3D-7A0A0C4DH55 119 aa7.26□□□□□ -1.25
APOBEC3A-205ENST00000618553 A0A1B0GVX0 72 aa7.26□□□□□ -1.25
APOBEC3A-205ENST00000618553 NDUFB1O75438 58 aa7.26□□□□□ -1.25
APOBEC3A-205ENST00000618553 PRR15Q8IV56 129 aa7.26□□□□□ -1.25
APOBEC3A-205ENST00000618553 MUC2Q02817 5179 aa7.24□□□□□ -1.25
APOBEC3A-205ENST00000618553 K7EQZ3 153 aa7.24□□□□□ -1.25
APOBEC3A-205ENST00000618553 PRR4Q16378 134 aa7.24□□□□□ -1.25
APOBEC3A-205ENST00000618553 TPRXLQ17RH7 258 aa7.24□□□□□ -1.25
APOBEC3A-205ENST00000618553 C8orf87E5RJ46 101 aa7.23□□□□□ -1.25
APOBEC3A-205ENST00000618553 KRTAP13-3Q3SY46 172 aa7.23□□□□□ -1.25
APOBEC3A-205ENST00000618553 Q8N9L7 120 aa7.2□□□□□ -1.26
APOBEC3A-205ENST00000618553 IGHV6-1A0A0B4J1U7 121 aa7.19□□□□□ -1.26
APOBEC3A-205ENST00000618553 C8orf17Q9NRJ1 99 aa7.19□□□□□ -1.26
APOBEC3A-205ENST00000618553 MMP24-AS1A0A0U1RRL7 71 aa7.18□□□□□ -1.26
APOBEC3A-205ENST00000618553 LINC00313P59037 77 aa7.18□□□□□ -1.26
APOBEC3A-205ENST00000618553 KRTAP9-8Q9BYQ0 159 aa7.18□□□□□ -1.26
APOBEC3A-205ENST00000618553 IMUPQ9GZP8 106 aa7.18□□□□□ -1.26
APOBEC3A-205ENST00000618553 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
APOBEC3A-205ENST00000618553 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
APOBEC3A-205ENST00000618553 MT-ATP8P03928 68 aa7.16□□□□□ -1.26
APOBEC3A-205ENST00000618553 C9orf92A6NGG3 77 aa7.13□□□□□ -1.27
APOBEC3A-205ENST00000618553 HCG22E2RYF7 251 aa7.13□□□□□ -1.27
APOBEC3A-205ENST00000618553 TMEM254Q8TBM7 123 aa7.13□□□□□ -1.27
APOBEC3A-205ENST00000618553 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
APOBEC3A-205ENST00000618553 hDV103S1A0JD37 113 aa7.12□□□□□ -1.27
APOBEC3A-205ENST00000618553 HIST1H4AP62805 103 aaKnown RBP7.12□□□□□ -1.27
APOBEC3A-205ENST00000618553 C20orf166-AS1Q96NR2 134 aa7.12□□□□□ -1.27
APOBEC3A-205ENST00000618553 FAT4Q6V0I7 4981 aa7.12□□□□□ -1.27
APOBEC3A-205ENST00000618553 Q8N9P0 234 aaPredicted RBP7.11□□□□□ -1.27
APOBEC3A-205ENST00000618553 A8MUU9 505 aa7.1□□□□□ -1.27
APOBEC3A-205ENST00000618553 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
APOBEC3A-205ENST00000618553 A0A087WVE0 104 aa7.09□□□□□ -1.27
APOBEC3A-205ENST00000618553 Q75L30 129 aa7.09□□□□□ -1.27
APOBEC3A-205ENST00000618553 MRPL34Q9BQ48 92 aaKnown RBP7.09□□□□□ -1.27
APOBEC3A-205ENST00000618553 WFDC13Q8IUB5 93 aa7.07□□□□□ -1.28
APOBEC3A-205ENST00000618553 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
APOBEC3A-205ENST00000618553 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
APOBEC3A-205ENST00000618553 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
APOBEC3A-205ENST00000618553 FAM236AA0A1B0GUQ0 79 aa6.98□□□□□ -1.29
APOBEC3A-205ENST00000618553 FAM236BA0A1B0GV22 79 aa6.98□□□□□ -1.29
APOBEC3A-205ENST00000618553 SEC61BP60468 96 aaKnown RBP6.96□□□□□ -1.3
APOBEC3A-205ENST00000618553 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
APOBEC3A-205ENST00000618553 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
APOBEC3A-205ENST00000618553 NDUFS5O43920 106 aa6.95□□□□□ -1.3
APOBEC3A-205ENST00000618553 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
APOBEC3A-205ENST00000618553 UQCRQO14949 82 aa6.93□□□□□ -1.3
APOBEC3A-205ENST00000618553 ATOX1O00244 68 aa6.92□□□□□ -1.3
APOBEC3A-205ENST00000618553 SCGB1A1P11684 91 aa6.92□□□□□ -1.3
APOBEC3A-205ENST00000618553 SMIM20Q8N5G0 67 aa6.92□□□□□ -1.3
APOBEC3A-205ENST00000618553 PCOTHQ58A44 107 aa6.91□□□□□ -1.3
APOBEC3A-205ENST00000618553 Q5W150 140 aa6.91□□□□□ -1.3
APOBEC3A-205ENST00000618553 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
APOBEC3A-205ENST00000618553 TRAV7A0A075B6U4 112 aa6.88□□□□□ -1.31
APOBEC3A-205ENST00000618553 MUC17Q685J3 4493 aa6.86□□□□□ -1.31
APOBEC3A-205ENST00000618553 C5orf47Q569G3 176 aa6.84□□□□□ -1.31
APOBEC3A-205ENST00000618553 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
APOBEC3A-205ENST00000618553 SERP2Q8N6R1 65 aa6.83□□□□□ -1.32
APOBEC3A-205ENST00000618553 H0Y9P7 68 aa6.82□□□□□ -1.32
APOBEC3A-205ENST00000618553 H3BPC8 53 aa6.82□□□□□ -1.32
APOBEC3A-205ENST00000618553 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
APOBEC3A-205ENST00000618553 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
APOBEC3A-205ENST00000618553 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
APOBEC3A-205ENST00000618553 MP68P56378 58 aa6.79□□□□□ -1.32
APOBEC3A-205ENST00000618553 C7orf65Q6ZTY9 151 aa6.79□□□□□ -1.32
APOBEC3A-205ENST00000618553 SPINK7P58062 85 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms