RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MP68P56378 58 aa8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 C1orf64Q8NEQ6 169 aa8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 ZNF706Q9Y5V0 76 aaPredicted RBP8.35□□□□□ -1.07
PCDHGA3-202ENST00000612467 NDUFB1O75438 58 aa8.33□□□□□ -1.08
PCDHGA3-202ENST00000612467 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
PCDHGA3-202ENST00000612467 KRTAP10-1P60331 282 aa8.31□□□□□ -1.08
PCDHGA3-202ENST00000612467 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
PCDHGA3-202ENST00000612467 NDUFS5O43920 106 aa8.3□□□□□ -1.08
PCDHGA3-202ENST00000612467 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
PCDHGA3-202ENST00000612467 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
PCDHGA3-202ENST00000612467 A0A1B0GVX0 72 aa8.28□□□□□ -1.08
PCDHGA3-202ENST00000612467 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
PCDHGA3-202ENST00000612467 PMAIP1Q13794 54 aa8.27□□□□□ -1.09
PCDHGA3-202ENST00000612467 Q1T7F1 81 aa8.25□□□□□ -1.09
PCDHGA3-202ENST00000612467 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 A8MUN3 132 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
PCDHGA3-202ENST00000612467 SACSQ9NZJ4 4579 aa8.22□□□□□ -1.09
PCDHGA3-202ENST00000612467 KRTAP13-2Q52LG2 175 aa8.22□□□□□ -1.09
PCDHGA3-202ENST00000612467 CYP4F30PQ9H0H9 118 aa8.2□□□□□ -1.1
PCDHGA3-202ENST00000612467 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
PCDHGA3-202ENST00000612467 CD164Q04900 197 aa8.19□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q5W150 140 aa8.17□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q6ZSA8 131 aa8.17□□□□□ -1.1
PCDHGA3-202ENST00000612467 RETNLBQ9BQ08 111 aa8.16□□□□□ -1.1
PCDHGA3-202ENST00000612467 H3BPC8 53 aa8.15□□□□□ -1.1
PCDHGA3-202ENST00000612467 Q5VV11 94 aa8.14□□□□□ -1.11
PCDHGA3-202ENST00000612467 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
PCDHGA3-202ENST00000612467 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 FAT1Q14517 4588 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 KRTAP1-4P0C5Y4 121 aa8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 DYNC1H1Q14204 4646 aaKnown RBP8.12□□□□□ -1.11
PCDHGA3-202ENST00000612467 SPANXA2-OT1Q8N9U9 137 aa8.11□□□□□ -1.11
PCDHGA3-202ENST00000612467 IGLV7-46A0A075B6I9 117 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 CHKB-CPT1BH3BT56 60 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 COA5Q86WW8 74 aa8.08□□□□□ -1.12
PCDHGA3-202ENST00000612467 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
PCDHGA3-202ENST00000612467 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
PCDHGA3-202ENST00000612467 PLA2G1BP04054 148 aaKnown RBP8.05□□□□□ -1.12
PCDHGA3-202ENST00000612467 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
PCDHGA3-202ENST00000612467 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
PCDHGA3-202ENST00000612467 LINC00313P59037 77 aa8.03□□□□□ -1.12
PCDHGA3-202ENST00000612467 LCA10Q71F78 164 aa8.03□□□□□ -1.12
PCDHGA3-202ENST00000612467 KMT2CQ8NEZ4 4911 aaKnown RBP8□□□□□ -1.13
PCDHGA3-202ENST00000612467 PRR26Q8N8Z3 221 aa8□□□□□ -1.13
PCDHGA3-202ENST00000612467 HRES1P13985 223 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 C4orf48Q5BLP8 95 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 TYMSOSQ8TAI1 123 aa7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 APOBP04114 4563 aaKnown RBP7.99□□□□□ -1.13
PCDHGA3-202ENST00000612467 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
PCDHGA3-202ENST00000612467 SPAG11AQ6PDA7 123 aa7.97□□□□□ -1.13
PCDHGA3-202ENST00000612467 C8orf87E5RJ46 101 aa7.96□□□□□ -1.13
PCDHGA3-202ENST00000612467 KRTAP16-1A8MUX0 517 aa7.96□□□□□ -1.14
PCDHGA3-202ENST00000612467 LOC101927531A0A1B0GV80 90 aa7.95□□□□□ -1.14
PCDHGA3-202ENST00000612467 KTN1-AS1Q86SY8 53 aa7.94□□□□□ -1.14
PCDHGA3-202ENST00000612467 A6NED7 52 aa7.94□□□□□ -1.14
PCDHGA3-202ENST00000612467 RYR2Q92736 4967 aa7.93□□□□□ -1.14
PCDHGA3-202ENST00000612467 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
PCDHGA3-202ENST00000612467 A6NN06 94 aa7.9□□□□□ -1.14
PCDHGA3-202ENST00000612467 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
PCDHGA3-202ENST00000612467 IGKV2-30P06310 120 aa7.89□□□□□ -1.15
PCDHGA3-202ENST00000612467 Q75L30 129 aa7.88□□□□□ -1.15
PCDHGA3-202ENST00000612467 FAM229AH3BQW9 127 aa7.88□□□□□ -1.15
PCDHGA3-202ENST00000612467 ATP11AUNQ6ZP68 121 aa7.87□□□□□ -1.15
PCDHGA3-202ENST00000612467 LINC00304Q8N9R0 145 aa7.86□□□□□ -1.15
PCDHGA3-202ENST00000612467 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
PCDHGA3-202ENST00000612467 SPINK1P00995 79 aa7.85□□□□□ -1.15
PCDHGA3-202ENST00000612467 SPINK7P58062 85 aa7.84□□□□□ -1.15
PCDHGA3-202ENST00000612467 LRP1Q07954 4544 aaKnown RBP7.83□□□□□ -1.16
PCDHGA3-202ENST00000612467 C9orf92A6NGG3 77 aa7.82□□□□□ -1.16
PCDHGA3-202ENST00000612467 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
PCDHGA3-202ENST00000612467 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
PCDHGA3-202ENST00000612467 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
PCDHGA3-202ENST00000612467 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
PCDHGA3-202ENST00000612467 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
PCDHGA3-202ENST00000612467 ACYP2P14621 99 aa7.78□□□□□ -1.16
PCDHGA3-202ENST00000612467 C7orf65Q6ZTY9 151 aa7.75□□□□□ -1.17
PCDHGA3-202ENST00000612467 RYR3Q15413 4870 aa7.75□□□□□ -1.17
PCDHGA3-202ENST00000612467 PRAC1Q96KF2 57 aa7.74□□□□□ -1.17
PCDHGA3-202ENST00000612467 H3BS24 57 aa7.74□□□□□ -1.17
PCDHGA3-202ENST00000612467 Q8N1X5 172 aa7.73□□□□□ -1.17
PCDHGA3-202ENST00000612467 ADM2Q7Z4H4 148 aa7.72□□□□□ -1.17
PCDHGA3-202ENST00000612467 FLG2Q5D862 2391 aaPredicted RBP7.7□□□□□ -1.18
PCDHGA3-202ENST00000612467 HSPG2P98160 4391 aa7.68□□□□□ -1.18
PCDHGA3-202ENST00000612467 MYCBP2O75592 4640 aa7.68□□□□□ -1.18
PCDHGA3-202ENST00000612467 FAT3Q8TDW7 4589 aa7.65□□□□□ -1.18
PCDHGA3-202ENST00000612467 TNXBP22105 4242 aa7.65□□□□□ -1.18
PCDHGA3-202ENST00000612467 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
PCDHGA3-202ENST00000612467 RPS29P62273 56 aaKnown RBP7.64□□□□□ -1.19
PCDHGA3-202ENST00000612467 KRTAP17-1Q9BYP8 105 aa7.62□□□□□ -1.19
PCDHGA3-202ENST00000612467 KIAA1109Q2LD37 5005 aa7.59□□□□□ -1.19
PCDHGA3-202ENST00000612467 A0A1B0GU69 56 aa7.59□□□□□ -1.19
PCDHGA3-202ENST00000612467 A8MUU9 505 aa7.58□□□□□ -1.2
PCDHGA3-202ENST00000612467 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
PCDHGA3-202ENST00000612467 RYR1P21817 5038 aa7.56□□□□□ -1.2
PCDHGA3-202ENST00000612467 Q5VSD8 79 aa7.54□□□□□ -1.2
PCDHGA3-202ENST00000612467 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
PCDHGA3-202ENST00000612467 EPPK1P58107 5090 aaKnown RBP7.49□□□□□ -1.21
PCDHGA3-202ENST00000612467 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms