RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
PBX1-221ENST00000612123 PLAC8Q9NZF1 115 aa4.22□□□□□ -1.73
PBX1-221ENST00000612123 ANK2Q01484 3957 aa4.21□□□□□ -1.73
PBX1-221ENST00000612123 A0A1W2PNM2 257 aa4.21□□□□□ -1.74
PBX1-221ENST00000612123 TENM2Q9NT68 2774 aa4.2□□□□□ -1.74
PBX1-221ENST00000612123 CSAG1Q6PB30 78 aa4.2□□□□□ -1.74
PBX1-221ENST00000612123 A6NN06 94 aa4.19□□□□□ -1.74
PBX1-221ENST00000612123 SPRR1AP35321 89 aa4.19□□□□□ -1.74
PBX1-221ENST00000612123 Q8N9P0 234 aaPredicted RBP4.18□□□□□ -1.74
PBX1-221ENST00000612123 SPRR1BP22528 89 aa4.17□□□□□ -1.74
PBX1-221ENST00000612123 LCE6AA0A183 80 aa4.17□□□□□ -1.74
PBX1-221ENST00000612123 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.17□□□□□ -1.74
PBX1-221ENST00000612123 Q1T7F1 81 aa4.16□□□□□ -1.74
PBX1-221ENST00000612123 COA5Q86WW8 74 aa4.16□□□□□ -1.74
PBX1-221ENST00000612123 CYP4F30PQ9H0H9 118 aa4.16□□□□□ -1.74
PBX1-221ENST00000612123 TENM1Q9UKZ4 2725 aa4.15□□□□□ -1.74
PBX1-221ENST00000612123 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
PBX1-221ENST00000612123 MIR22HGQ0VDD5 57 aa4.13□□□□□ -1.75
PBX1-221ENST00000612123 KRTAP26-1Q6PEX3 210 aa4.13□□□□□ -1.75
PBX1-221ENST00000612123 UQCR11O14957 56 aa4.12□□□□□ -1.75
PBX1-221ENST00000612123 TENM3Q9P273 2699 aa4.12□□□□□ -1.75
PBX1-221ENST00000612123 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
PBX1-221ENST00000612123 Q6ZR54 194 aa4.11□□□□□ -1.75
PBX1-221ENST00000612123 KRTAP1-5Q9BYS1 174 aa4.09□□□□□ -1.75
PBX1-221ENST00000612123 STAB2Q8WWQ8 2551 aa4.09□□□□□ -1.75
PBX1-221ENST00000612123 Q6ZSA8 131 aa4.09□□□□□ -1.76
PBX1-221ENST00000612123 CAMK2N1Q7Z7J9 78 aa4.07□□□□□ -1.76
PBX1-221ENST00000612123 DNAH10Q8IVF4 4471 aa4.06□□□□□ -1.76
PBX1-221ENST00000612123 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
PBX1-221ENST00000612123 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
PBX1-221ENST00000612123 TENM4Q6N022 2769 aa4.05□□□□□ -1.76
PBX1-221ENST00000612123 FRAS1Q86XX4 4008 aa4.05□□□□□ -1.76
PBX1-221ENST00000612123 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
PBX1-221ENST00000612123 LINC00483Q53H64 154 aa4.04□□□□□ -1.76
PBX1-221ENST00000612123 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
PBX1-221ENST00000612123 Q5VSD8 79 aa4.03□□□□□ -1.76
PBX1-221ENST00000612123 KRTAP10-1P60331 282 aa4.03□□□□□ -1.76
PBX1-221ENST00000612123 ZCCHC13Q8WW36 166 aaKnown RBP4.03□□□□□ -1.76
PBX1-221ENST00000612123 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
PBX1-221ENST00000612123 LUZP6Q538Z0 58 aa4.03□□□□□ -1.77
PBX1-221ENST00000612123 MEGF8Q7Z7M0 2845 aa4.02□□□□□ -1.77
PBX1-221ENST00000612123 TGP01266 2768 aa4.01□□□□□ -1.77
PBX1-221ENST00000612123 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
PBX1-221ENST00000612123 KRTAP10-2P60368 255 aa4□□□□□ -1.77
PBX1-221ENST00000612123 Q75L30 129 aa3.99□□□□□ -1.77
PBX1-221ENST00000612123 HRES1P13985 223 aa3.98□□□□□ -1.77
PBX1-221ENST00000612123 RPS29P62273 56 aaKnown RBP3.98□□□□□ -1.77
PBX1-221ENST00000612123 Q6ZRN7 208 aaPredicted RBP3.98□□□□□ -1.77
PBX1-221ENST00000612123 A0A087X002 238 aa3.97□□□□□ -1.77
PBX1-221ENST00000612123 P0C880 135 aa3.97□□□□□ -1.77
PBX1-221ENST00000612123 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
PBX1-221ENST00000612123 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
PBX1-221ENST00000612123 ASB16-AS1Q495Z4 193 aa3.96□□□□□ -1.78
PBX1-221ENST00000612123 S4R3F8 94 aa3.94□□□□□ -1.78
PBX1-221ENST00000612123 Q5W150 140 aa3.94□□□□□ -1.78
PBX1-221ENST00000612123 PLAC4Q8WY50 150 aa3.94□□□□□ -1.78
PBX1-221ENST00000612123 PANO1I0J062 215 aa3.92□□□□□ -1.78
PBX1-221ENST00000612123 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
PBX1-221ENST00000612123 A0A1B0GU33 70 aa3.92□□□□□ -1.78
PBX1-221ENST00000612123 FBN3Q75N90 2809 aa3.9□□□□□ -1.78
PBX1-221ENST00000612123 LINC01558Q9Y6Z2 57 aa3.9□□□□□ -1.79
PBX1-221ENST00000612123 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
PBX1-221ENST00000612123 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
PBX1-221ENST00000612123 ROMO1P60602 79 aa3.89□□□□□ -1.79
PBX1-221ENST00000612123 ANK3Q12955 4377 aaKnown RBP3.89□□□□□ -1.79
PBX1-221ENST00000612123 SPATA8Q6RVD6 105 aa3.88□□□□□ -1.79
PBX1-221ENST00000612123 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
PBX1-221ENST00000612123 KRTAP13-1Q8IUC0 172 aa3.87□□□□□ -1.79
PBX1-221ENST00000612123 KRTAP11-1Q8IUC1 163 aa3.86□□□□□ -1.79
PBX1-221ENST00000612123 A8MUU9 505 aa3.85□□□□□ -1.79
PBX1-221ENST00000612123 KRTAP7-1Q8IUC3 87 aa3.84□□□□□ -1.79
PBX1-221ENST00000612123 CMYA5Q8N3K9 4069 aa3.84□□□□□ -1.8
PBX1-221ENST00000612123 R4GN34 69 aa3.83□□□□□ -1.8
PBX1-221ENST00000612123 M0QZ58 72 aa3.83□□□□□ -1.8
PBX1-221ENST00000612123 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
PBX1-221ENST00000612123 VPS13DQ5THJ4 4388 aa3.8□□□□□ -1.8
PBX1-221ENST00000612123 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
PBX1-221ENST00000612123 KRTAP13-2Q52LG2 175 aa3.79□□□□□ -1.8
PBX1-221ENST00000612123 KMT2AQ03164 3969 aa3.78□□□□□ -1.8
PBX1-221ENST00000612123 RPL37P61927 97 aaKnown RBP3.77□□□□□ -1.81
PBX1-221ENST00000612123 DNAH9Q9NYC9 4486 aa3.76□□□□□ -1.81
PBX1-221ENST00000612123 HUWE1Q7Z6Z7 4374 aaKnown RBP3.75□□□□□ -1.81
PBX1-221ENST00000612123 HECTD4Q9Y4D8 3996 aa3.75□□□□□ -1.81
PBX1-221ENST00000612123 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
PBX1-221ENST00000612123 DNAH17Q9UFH2 4485 aa3.74□□□□□ -1.81
PBX1-221ENST00000612123 DNAH8Q96JB1 4490 aa3.72□□□□□ -1.81
PBX1-221ENST00000612123 A0A1B0GVY2 172 aa3.72□□□□□ -1.81
PBX1-221ENST00000612123 KRTAP16-1A8MUX0 517 aa3.7□□□□□ -1.82
PBX1-221ENST00000612123 H0YAA0 97 aa3.69□□□□□ -1.82
PBX1-221ENST00000612123 ALMS1Q8TCU4 4167 aa3.68□□□□□ -1.82
PBX1-221ENST00000612123 KRTAP1-4P0C5Y4 121 aa3.67□□□□□ -1.82
PBX1-221ENST00000612123 TPRXLQ17RH7 258 aa3.65□□□□□ -1.83
PBX1-221ENST00000612123 XP32Q5T750 250 aa3.59□□□□□ -1.83
PBX1-221ENST00000612123 DNAH6Q9C0G6 4158 aa3.58□□□□□ -1.84
PBX1-221ENST00000612123 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
PBX1-221ENST00000612123 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
PBX1-221ENST00000612123 MYCBP2O75592 4640 aa3.54□□□□□ -1.84
PBX1-221ENST00000612123 KRTAP13-3Q3SY46 172 aa3.53□□□□□ -1.84
PBX1-221ENST00000612123 DNAH3Q8TD57 4116 aa3.52□□□□□ -1.85
PBX1-221ENST00000612123 FAT2Q9NYQ8 4349 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms