RNA–Protein interactions for RNA: ENST00000591286.5

RTN2-210, Transcript of reticulon 2, humanhuman

TSL 1 (best)

Gene RTN2, Length 2,111 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-210ENST00000591286 KTN1-AS1Q86SY8 53 aa15.47■□□□□ 0.07
RTN2-210ENST00000591286 Q96NJ1 140 aa15.47■□□□□ 0.07
RTN2-210ENST00000591286 A0A1B0GVY2 172 aa15.45■□□□□ 0.06
RTN2-210ENST00000591286 A8MU10 97 aa15.45■□□□□ 0.06
RTN2-210ENST00000591286 PRR4Q16378 134 aa15.45■□□□□ 0.06
RTN2-210ENST00000591286 SSBP3-AS1Q7Z2R9 100 aa15.43■□□□□ 0.06
RTN2-210ENST00000591286 LIMD2Q9BT23 127 aa15.43■□□□□ 0.06
RTN2-210ENST00000591286 SPANXA2-OT1Q8N9U9 137 aa15.4■□□□□ 0.06
RTN2-210ENST00000591286 Q8N9P0 234 aaPredicted RBP15.4■□□□□ 0.06
RTN2-210ENST00000591286 WFDC13Q8IUB5 93 aa15.39■□□□□ 0.05
RTN2-210ENST00000591286 A0A087X002 238 aa15.38■□□□□ 0.05
RTN2-210ENST00000591286 KRTAP29-1A8MX34 341 aaPredicted RBP15.37■□□□□ 0.05
RTN2-210ENST00000591286 PKHD1P08F94 4074 aa15.36■□□□□ 0.05
RTN2-210ENST00000591286 CHKB-CPT1BH3BT56 60 aa15.35■□□□□ 0.05
RTN2-210ENST00000591286 MP68P56378 58 aa15.35■□□□□ 0.05
RTN2-210ENST00000591286 KRTAP13-2Q52LG2 175 aa15.35■□□□□ 0.05
RTN2-210ENST00000591286 RBM12B-AS1Q9P1G2 102 aa15.35■□□□□ 0.05
RTN2-210ENST00000591286 KRTAP1-4P0C5Y4 121 aa15.34■□□□□ 0.05
RTN2-210ENST00000591286 ATP11AUNQ6ZP68 121 aa15.33■□□□□ 0.04
RTN2-210ENST00000591286 LINC00208Q96KT6 92 aa15.32■□□□□ 0.04
RTN2-210ENST00000591286 CASC2Q6XLA1 102 aa15.31■□□□□ 0.04
RTN2-210ENST00000591286 NDUFS5O43920 106 aa15.31■□□□□ 0.04
RTN2-210ENST00000591286 Q75L30 129 aa15.31■□□□□ 0.04
RTN2-210ENST00000591286 VPS13BQ7Z7G8 4022 aa15.29■□□□□ 0.04
RTN2-210ENST00000591286 H3BPC8 53 aa15.29■□□□□ 0.04
RTN2-210ENST00000591286 RYR2Q92736 4967 aa15.29■□□□□ 0.04
RTN2-210ENST00000591286 DYNC1H1Q14204 4646 aaKnown RBP15.29■□□□□ 0.04
RTN2-210ENST00000591286 MMP24-AS1A0A0U1RRL7 71 aa15.28■□□□□ 0.04
RTN2-210ENST00000591286 PRR15LQ9BU68 103 aa15.27■□□□□ 0.04
RTN2-210ENST00000591286 A6NN06 94 aa15.26■□□□□ 0.03
RTN2-210ENST00000591286 LOC101927531A0A1B0GV80 90 aa15.25■□□□□ 0.03
RTN2-210ENST00000591286 LCA10Q71F78 164 aa15.25■□□□□ 0.03
RTN2-210ENST00000591286 A0A1B0GVX0 72 aa15.22■□□□□ 0.03
RTN2-210ENST00000591286 CDK2AP2O75956 126 aa15.21■□□□□ 0.03
RTN2-210ENST00000591286 SPINK6Q6UWN8 80 aa15.21■□□□□ 0.03
RTN2-210ENST00000591286 ASB16-AS1Q495Z4 193 aa15.2■□□□□ 0.02
RTN2-210ENST00000591286 SMR3BP02814 79 aaPredicted RBP15.19■□□□□ 0.02
RTN2-210ENST00000591286 C8orf17Q9NRJ1 99 aa15.19■□□□□ 0.02
RTN2-210ENST00000591286 PLA2G1BP04054 148 aaKnown RBP15.18■□□□□ 0.02
RTN2-210ENST00000591286 SPTSSBQ8NFR3 76 aa15.18■□□□□ 0.02
RTN2-210ENST00000591286 IGHV6-1A0A0B4J1U7 121 aa15.17■□□□□ 0.02
RTN2-210ENST00000591286 KMT2CQ8NEZ4 4911 aaKnown RBP15.17■□□□□ 0.02
RTN2-210ENST00000591286 H0Y9P7 68 aa15.15■□□□□ 0.02
RTN2-210ENST00000591286 CDC42SE1Q9NRR8 79 aa15.14■□□□□ 0.01
RTN2-210ENST00000591286 A6NED7 52 aa15.12■□□□□ 0.01
RTN2-210ENST00000591286 APOBP04114 4563 aaKnown RBP15.09■□□□□ 0.01
RTN2-210ENST00000591286 TYMSOSQ8TAI1 123 aa15.08■□□□□ 0.01
RTN2-210ENST00000591286 KRTAP10-4P60372 401 aaPredicted RBP15.08■□□□□ 0
RTN2-210ENST00000591286 C7orf65Q6ZTY9 151 aa15.07■□□□□ 0
RTN2-210ENST00000591286 NOTCH2NLQ7Z3S9 236 aa15.07■□□□□ 0
RTN2-210ENST00000591286 COA5Q86WW8 74 aa15.07■□□□□ 0
RTN2-210ENST00000591286 IGLV7-46A0A075B6I9 117 aa15.02■□□□□ -0
RTN2-210ENST00000591286 MRPL34Q9BQ48 92 aaKnown RBP15.01□□□□□ -0.01
RTN2-210ENST00000591286 PRR26Q8N8Z3 221 aa15□□□□□ -0.01
RTN2-210ENST00000591286 LINC01558Q9Y6Z2 57 aa15□□□□□ -0.01
RTN2-210ENST00000591286 C4orf48Q5BLP8 95 aa14.99□□□□□ -0.01
RTN2-210ENST00000591286 TP53AIP1Q9HCN2 124 aa14.98□□□□□ -0.01
RTN2-210ENST00000591286 SPINK1P00995 79 aa14.95□□□□□ -0.02
RTN2-210ENST00000591286 FAT1Q14517 4588 aa14.95□□□□□ -0.02
RTN2-210ENST00000591286 C8orf87E5RJ46 101 aa14.95□□□□□ -0.02
RTN2-210ENST00000591286 LINC00304Q8N9R0 145 aa14.9□□□□□ -0.02
RTN2-210ENST00000591286 LINC00313P59037 77 aa14.85□□□□□ -0.03
RTN2-210ENST00000591286 RPS29P62273 56 aaKnown RBP14.85□□□□□ -0.03
RTN2-210ENST00000591286 SPAG11AQ6PDA7 123 aa14.85□□□□□ -0.03
RTN2-210ENST00000591286 RYR3Q15413 4870 aa14.77□□□□□ -0.04
RTN2-210ENST00000591286 SPINK7P58062 85 aa14.77□□□□□ -0.04
RTN2-210ENST00000591286 FAM229AH3BQW9 127 aa14.76□□□□□ -0.05
RTN2-210ENST00000591286 KRTAP16-1A8MUX0 517 aa14.72□□□□□ -0.05
RTN2-210ENST00000591286 Q5W150 140 aa14.71□□□□□ -0.06
RTN2-210ENST00000591286 KRTAP13-3Q3SY46 172 aa14.7□□□□□ -0.06
RTN2-210ENST00000591286 PCOTHQ58A44 107 aa14.7□□□□□ -0.06
RTN2-210ENST00000591286 PKHD1L1Q86WI1 4243 aa14.68□□□□□ -0.06
RTN2-210ENST00000591286 HRES1P13985 223 aa14.66□□□□□ -0.06
RTN2-210ENST00000591286 Q5VSD8 79 aa14.66□□□□□ -0.06
RTN2-210ENST00000591286 HSPG2P98160 4391 aa14.61□□□□□ -0.07
RTN2-210ENST00000591286 RYR1P21817 5038 aa14.52□□□□□ -0.09
RTN2-210ENST00000591286 KRTAP17-1Q9BYP8 105 aa14.51□□□□□ -0.09
RTN2-210ENST00000591286 RETNLBQ9BQ08 111 aa14.5□□□□□ -0.09
RTN2-210ENST00000591286 PRAC1Q96KF2 57 aa14.48□□□□□ -0.09
RTN2-210ENST00000591286 KRTAP10-8P60410 259 aa14.48□□□□□ -0.09
RTN2-210ENST00000591286 Q8N1X5 172 aa14.46□□□□□ -0.09
RTN2-210ENST00000591286 FLG2Q5D862 2391 aaPredicted RBP14.44□□□□□ -0.1
RTN2-210ENST00000591286 LINC01554Q52M75 96 aa14.44□□□□□ -0.1
RTN2-210ENST00000591286 IGKV2-30P06310 120 aa14.4□□□□□ -0.1
RTN2-210ENST00000591286 LRP1Q07954 4544 aaKnown RBP14.38□□□□□ -0.11
RTN2-210ENST00000591286 C9orf92A6NGG3 77 aa14.36□□□□□ -0.11
RTN2-210ENST00000591286 ADM2Q7Z4H4 148 aa14.36□□□□□ -0.11
RTN2-210ENST00000591286 TNXBP22105 4242 aa14.35□□□□□ -0.11
RTN2-210ENST00000591286 KIAA1109Q2LD37 5005 aa14.34□□□□□ -0.11
RTN2-210ENST00000591286 C20orf166-AS1Q96NR2 134 aa14.29□□□□□ -0.12
RTN2-210ENST00000591286 SPATA8Q6RVD6 105 aa14.29□□□□□ -0.12
RTN2-210ENST00000591286 A8MUU9 505 aa14.28□□□□□ -0.12
RTN2-210ENST00000591286 H3BS24 57 aa14.26□□□□□ -0.13
RTN2-210ENST00000591286 ACYP2P14621 99 aa14.26□□□□□ -0.13
RTN2-210ENST00000591286 IGKV2D-30A0A075B6S6 120 aa14.25□□□□□ -0.13
RTN2-210ENST00000591286 EPPK1P58107 5090 aaKnown RBP14.24□□□□□ -0.13
RTN2-210ENST00000591286 FAT3Q8TDW7 4589 aa14.23□□□□□ -0.13
RTN2-210ENST00000591286 MT1HL1P0DM35 61 aa14.19□□□□□ -0.14
RTN2-210ENST00000591286 DMAC1Q96GE9 116 aa14.15□□□□□ -0.14
RTN2-210ENST00000591286 DMBT1Q9UGM3 2413 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms