RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 FAT2Q9NYQ8 4349 aa13.67□□□□□ -0.22
R3HDM4-203ENST00000587975 PKD1P98161 4303 aa13.64□□□□□ -0.23
R3HDM4-203ENST00000587975 C8orf87E5RJ46 101 aa13.6□□□□□ -0.23
R3HDM4-203ENST00000587975 KRTAP13-2Q52LG2 175 aa13.56□□□□□ -0.24
R3HDM4-203ENST00000587975 A0A087X002 238 aa13.55□□□□□ -0.24
R3HDM4-203ENST00000587975 NDUFS5O43920 106 aa13.55□□□□□ -0.24
R3HDM4-203ENST00000587975 NOTCH2NLQ7Z3S9 236 aa13.55□□□□□ -0.24
R3HDM4-203ENST00000587975 HYDINQ4G0P3 5121 aa13.54□□□□□ -0.24
R3HDM4-203ENST00000587975 SPINK6Q6UWN8 80 aa13.54□□□□□ -0.24
R3HDM4-203ENST00000587975 IGLV7-46A0A075B6I9 117 aa13.53□□□□□ -0.24
R3HDM4-203ENST00000587975 PRR4Q16378 134 aa13.53□□□□□ -0.24
R3HDM4-203ENST00000587975 LRP1BQ9NZR2 4599 aa13.53□□□□□ -0.24
R3HDM4-203ENST00000587975 KRTAP1-4P0C5Y4 121 aa13.51□□□□□ -0.25
R3HDM4-203ENST00000587975 Q1T7F1 81 aa13.51□□□□□ -0.25
R3HDM4-203ENST00000587975 MPLKIPQ8TAP9 179 aa13.48□□□□□ -0.25
R3HDM4-203ENST00000587975 LIMD2Q9BT23 127 aa13.47□□□□□ -0.25
R3HDM4-203ENST00000587975 LOC101927531A0A1B0GV80 90 aa13.45□□□□□ -0.26
R3HDM4-203ENST00000587975 C1orf195Q5TG92 126 aa13.44□□□□□ -0.26
R3HDM4-203ENST00000587975 LINC00336Q6ZUF6 198 aa13.44□□□□□ -0.26
R3HDM4-203ENST00000587975 KRTAP13-3Q3SY46 172 aa13.43□□□□□ -0.26
R3HDM4-203ENST00000587975 V9GYY9 64 aa13.42□□□□□ -0.26
R3HDM4-203ENST00000587975 KMT2CQ8NEZ4 4911 aaKnown RBP13.42□□□□□ -0.26
R3HDM4-203ENST00000587975 SACSQ9NZJ4 4579 aa13.41□□□□□ -0.26
R3HDM4-203ENST00000587975 LINC00313P59037 77 aa13.4□□□□□ -0.26
R3HDM4-203ENST00000587975 PCOTHQ58A44 107 aa13.38□□□□□ -0.27
R3HDM4-203ENST00000587975 Q8N9P0 234 aaPredicted RBP13.37□□□□□ -0.27
R3HDM4-203ENST00000587975 VPS13BQ7Z7G8 4022 aa13.36□□□□□ -0.27
R3HDM4-203ENST00000587975 PLA2G1BP04054 148 aaKnown RBP13.35□□□□□ -0.27
R3HDM4-203ENST00000587975 Q5W150 140 aa13.33□□□□□ -0.28
R3HDM4-203ENST00000587975 SPINK1P00995 79 aa13.32□□□□□ -0.28
R3HDM4-203ENST00000587975 C4orf48Q5BLP8 95 aa13.32□□□□□ -0.28
R3HDM4-203ENST00000587975 FAM229AH3BQW9 127 aa13.32□□□□□ -0.28
R3HDM4-203ENST00000587975 TYMSOSQ8TAI1 123 aa13.32□□□□□ -0.28
R3HDM4-203ENST00000587975 COA5Q86WW8 74 aa13.31□□□□□ -0.28
R3HDM4-203ENST00000587975 PRO0628Q9UI54 55 aa13.31□□□□□ -0.28
R3HDM4-203ENST00000587975 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
R3HDM4-203ENST00000587975 RYR2Q92736 4967 aa13.29□□□□□ -0.28
R3HDM4-203ENST00000587975 KRTAP16-1A8MUX0 517 aa13.26□□□□□ -0.29
R3HDM4-203ENST00000587975 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
R3HDM4-203ENST00000587975 SPAG11AQ6PDA7 123 aa13.22□□□□□ -0.29
R3HDM4-203ENST00000587975 RYR3Q15413 4870 aa13.22□□□□□ -0.29
R3HDM4-203ENST00000587975 DYNC1H1Q14204 4646 aaKnown RBP13.15□□□□□ -0.3
R3HDM4-203ENST00000587975 LINC00304Q8N9R0 145 aa13.15□□□□□ -0.3
R3HDM4-203ENST00000587975 BRK1Q8WUW1 75 aa13.15□□□□□ -0.3
R3HDM4-203ENST00000587975 PKHD1P08F94 4074 aa13.14□□□□□ -0.31
R3HDM4-203ENST00000587975 IGKV2-30P06310 120 aa13.14□□□□□ -0.31
R3HDM4-203ENST00000587975 HRES1P13985 223 aa13.14□□□□□ -0.31
R3HDM4-203ENST00000587975 PSPHP1O15172 72 aa13.13□□□□□ -0.31
R3HDM4-203ENST00000587975 PRR26Q8N8Z3 221 aa13.11□□□□□ -0.31
R3HDM4-203ENST00000587975 A8MUN3 132 aa13.09□□□□□ -0.31
R3HDM4-203ENST00000587975 Q5VV11 94 aa13.07□□□□□ -0.32
R3HDM4-203ENST00000587975 ACYP2P14621 99 aa13.07□□□□□ -0.32
R3HDM4-203ENST00000587975 KRTAP10-4P60372 401 aaPredicted RBP13.06□□□□□ -0.32
R3HDM4-203ENST00000587975 DMAC1Q96GE9 116 aa13.05□□□□□ -0.32
R3HDM4-203ENST00000587975 LINC01558Q9Y6Z2 57 aa13.04□□□□□ -0.32
R3HDM4-203ENST00000587975 APOBP04114 4563 aaKnown RBP13.03□□□□□ -0.32
R3HDM4-203ENST00000587975 SMR3BP02814 79 aaPredicted RBP13.02□□□□□ -0.32
R3HDM4-203ENST00000587975 PRR15LQ9BU68 103 aa13.01□□□□□ -0.33
R3HDM4-203ENST00000587975 Q75L30 129 aa12.99□□□□□ -0.33
R3HDM4-203ENST00000587975 PKHD1L1Q86WI1 4243 aa12.99□□□□□ -0.33
R3HDM4-203ENST00000587975 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
R3HDM4-203ENST00000587975 CHKB-CPT1BH3BT56 60 aa12.92□□□□□ -0.34
R3HDM4-203ENST00000587975 FAT1Q14517 4588 aa12.87□□□□□ -0.35
R3HDM4-203ENST00000587975 IGKV2D-30A0A075B6S6 120 aa12.86□□□□□ -0.35
R3HDM4-203ENST00000587975 C7orf65Q6ZTY9 151 aa12.83□□□□□ -0.36
R3HDM4-203ENST00000587975 C20orf166-AS1Q96NR2 134 aa12.81□□□□□ -0.36
R3HDM4-203ENST00000587975 A8MUU9 505 aa12.81□□□□□ -0.36
R3HDM4-203ENST00000587975 EPPK1P58107 5090 aaKnown RBP12.77□□□□□ -0.37
R3HDM4-203ENST00000587975 A6NED7 52 aa12.76□□□□□ -0.37
R3HDM4-203ENST00000587975 CDC42SE1Q9NRR8 79 aa12.69□□□□□ -0.38
R3HDM4-203ENST00000587975 C9orf92A6NGG3 77 aa12.66□□□□□ -0.38
R3HDM4-203ENST00000587975 LCA10Q71F78 164 aa12.66□□□□□ -0.38
R3HDM4-203ENST00000587975 ATP11AUNQ6ZP68 121 aa12.62□□□□□ -0.39
R3HDM4-203ENST00000587975 KRTAP10-8P60410 259 aa12.6□□□□□ -0.39
R3HDM4-203ENST00000587975 A8MU10 97 aa12.59□□□□□ -0.39
R3HDM4-203ENST00000587975 SPINK7P58062 85 aa12.58□□□□□ -0.4
R3HDM4-203ENST00000587975 A0A1B0GU69 56 aa12.56□□□□□ -0.4
R3HDM4-203ENST00000587975 Q5VSD8 79 aa12.54□□□□□ -0.4
R3HDM4-203ENST00000587975 Q8N1X5 172 aa12.53□□□□□ -0.4
R3HDM4-203ENST00000587975 FLG2Q5D862 2391 aaPredicted RBP12.52□□□□□ -0.4
R3HDM4-203ENST00000587975 BIRC6Q9NR09 4857 aa12.51□□□□□ -0.41
R3HDM4-203ENST00000587975 TNXBP22105 4242 aa12.51□□□□□ -0.41
R3HDM4-203ENST00000587975 HSPG2P98160 4391 aa12.5□□□□□ -0.41
R3HDM4-203ENST00000587975 SPTSSBQ8NFR3 76 aa12.48□□□□□ -0.41
R3HDM4-203ENST00000587975 PMAIP1Q13794 54 aa12.47□□□□□ -0.41
R3HDM4-203ENST00000587975 FAT3Q8TDW7 4589 aa12.46□□□□□ -0.41
R3HDM4-203ENST00000587975 KIAA1109Q2LD37 5005 aa12.4□□□□□ -0.43
R3HDM4-203ENST00000587975 RYR1P21817 5038 aa12.38□□□□□ -0.43
R3HDM4-203ENST00000587975 UQCR11O14957 56 aa12.35□□□□□ -0.43
R3HDM4-203ENST00000587975 SPATA8Q6RVD6 105 aa12.35□□□□□ -0.43
R3HDM4-203ENST00000587975 KRTAP3-1Q9BYR8 98 aa12.35□□□□□ -0.43
R3HDM4-203ENST00000587975 A6NN06 94 aa12.33□□□□□ -0.44
R3HDM4-203ENST00000587975 LRP1Q07954 4544 aaKnown RBP12.31□□□□□ -0.44
R3HDM4-203ENST00000587975 SEC61GP60059 68 aa12.3□□□□□ -0.44
R3HDM4-203ENST00000587975 COX6B2Q6YFQ2 88 aa12.3□□□□□ -0.44
R3HDM4-203ENST00000587975 RPL37P61927 97 aaKnown RBP12.29□□□□□ -0.44
R3HDM4-203ENST00000587975 MIR22HGQ0VDD5 57 aa12.25□□□□□ -0.45
R3HDM4-203ENST00000587975 KTN1-AS1Q86SY8 53 aa12.21□□□□□ -0.45
R3HDM4-203ENST00000587975 HERC2O95714 4834 aa12.2□□□□□ -0.46
R3HDM4-203ENST00000587975 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms