RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 UQCRQO14949 82 aa7.98□□□□□ -1.13
UBBP4-202ENST00000584755 C1orf195Q5TG92 126 aa7.98□□□□□ -1.13
UBBP4-202ENST00000584755 PRR15Q8IV56 129 aa7.98□□□□□ -1.13
UBBP4-202ENST00000584755 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
UBBP4-202ENST00000584755 HERC2O95714 4834 aa7.97□□□□□ -1.13
UBBP4-202ENST00000584755 FAM236AA0A1B0GUQ0 79 aa7.97□□□□□ -1.13
UBBP4-202ENST00000584755 FAM236BA0A1B0GV22 79 aa7.97□□□□□ -1.13
UBBP4-202ENST00000584755 MYCBP2O75592 4640 aa7.96□□□□□ -1.13
UBBP4-202ENST00000584755 FLG2Q5D862 2391 aaPredicted RBP7.96□□□□□ -1.13
UBBP4-202ENST00000584755 NDUFB1O75438 58 aa7.94□□□□□ -1.14
UBBP4-202ENST00000584755 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
UBBP4-202ENST00000584755 A0A1B0GVX0 72 aa7.93□□□□□ -1.14
UBBP4-202ENST00000584755 OXTP01178 125 aa7.93□□□□□ -1.14
UBBP4-202ENST00000584755 HCG22E2RYF7 251 aa7.9□□□□□ -1.14
UBBP4-202ENST00000584755 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
UBBP4-202ENST00000584755 KRTAP29-1A8MX34 341 aaPredicted RBP7.88□□□□□ -1.15
UBBP4-202ENST00000584755 ATOX1O00244 68 aa7.88□□□□□ -1.15
UBBP4-202ENST00000584755 IGHV6-1A0A0B4J1U7 121 aa7.87□□□□□ -1.15
UBBP4-202ENST00000584755 TMEM258P61165 79 aa7.87□□□□□ -1.15
UBBP4-202ENST00000584755 COX7CP15954 63 aa7.87□□□□□ -1.15
UBBP4-202ENST00000584755 C8orf17Q9NRJ1 99 aa7.87□□□□□ -1.15
UBBP4-202ENST00000584755 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
UBBP4-202ENST00000584755 ABCA13Q86UQ4 5058 aa7.85□□□□□ -1.15
UBBP4-202ENST00000584755 CASC2Q6XLA1 102 aa7.84□□□□□ -1.15
UBBP4-202ENST00000584755 NOTCH2NLQ7Z3S9 236 aa7.84□□□□□ -1.15
UBBP4-202ENST00000584755 WFDC13Q8IUB5 93 aa7.83□□□□□ -1.16
UBBP4-202ENST00000584755 hDV103S1A0JD37 113 aa7.82□□□□□ -1.16
UBBP4-202ENST00000584755 DMBT1Q9UGM3 2413 aaPredicted RBP7.81□□□□□ -1.16
UBBP4-202ENST00000584755 TMEM254Q8TBM7 123 aa7.81□□□□□ -1.16
UBBP4-202ENST00000584755 OCR1Q9BZK8 76 aa7.81□□□□□ -1.16
UBBP4-202ENST00000584755 LINC00313P59037 77 aa7.8□□□□□ -1.16
UBBP4-202ENST00000584755 RETNLBQ9BQ08 111 aa7.79□□□□□ -1.16
UBBP4-202ENST00000584755 TRAV7A0A075B6U4 112 aa7.78□□□□□ -1.16
UBBP4-202ENST00000584755 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
UBBP4-202ENST00000584755 MRPL34Q9BQ48 92 aaKnown RBP7.78□□□□□ -1.16
UBBP4-202ENST00000584755 KRTAP16-1A8MUX0 517 aa7.76□□□□□ -1.17
UBBP4-202ENST00000584755 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
UBBP4-202ENST00000584755 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
UBBP4-202ENST00000584755 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
UBBP4-202ENST00000584755 TP53AIP1Q9HCN2 124 aa7.7□□□□□ -1.18
UBBP4-202ENST00000584755 IGLV7-46A0A075B6I9 117 aa7.67□□□□□ -1.18
UBBP4-202ENST00000584755 J3QL48 77 aa7.67□□□□□ -1.18
UBBP4-202ENST00000584755 NDUFS5O43920 106 aa7.66□□□□□ -1.18
UBBP4-202ENST00000584755 C9orf92A6NGG3 77 aa7.65□□□□□ -1.18
UBBP4-202ENST00000584755 KRTAP13-3Q3SY46 172 aa7.63□□□□□ -1.19
UBBP4-202ENST00000584755 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
UBBP4-202ENST00000584755 A8MUU9 505 aa7.62□□□□□ -1.19
UBBP4-202ENST00000584755 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
UBBP4-202ENST00000584755 SERP1Q9Y6X1 66 aa7.62□□□□□ -1.19
UBBP4-202ENST00000584755 TRAV22A0A0B4J277 110 aa7.62□□□□□ -1.19
UBBP4-202ENST00000584755 KLKP1Q107X0 134 aa7.61□□□□□ -1.19
UBBP4-202ENST00000584755 C20orf197Q8N268 126 aa7.61□□□□□ -1.19
UBBP4-202ENST00000584755 A0A0U1RQV1 116 aa7.6□□□□□ -1.19
UBBP4-202ENST00000584755 H0Y9P7 68 aa7.6□□□□□ -1.19
UBBP4-202ENST00000584755 PRR4Q16378 134 aa7.6□□□□□ -1.19
UBBP4-202ENST00000584755 Q5W150 140 aa7.6□□□□□ -1.19
UBBP4-202ENST00000584755 V9GYY9 64 aa7.6□□□□□ -1.19
UBBP4-202ENST00000584755 H3BPC8 53 aa7.58□□□□□ -1.2
UBBP4-202ENST00000584755 MP68P56378 58 aa7.58□□□□□ -1.2
UBBP4-202ENST00000584755 SEC61GP60059 68 aa7.58□□□□□ -1.2
UBBP4-202ENST00000584755 TPRXLQ17RH7 258 aa7.58□□□□□ -1.2
UBBP4-202ENST00000584755 PCLOQ9Y6V0 5065 aa7.58□□□□□ -1.2
UBBP4-202ENST00000584755 SMIM26A0A096LP01 95 aa7.57□□□□□ -1.2
UBBP4-202ENST00000584755 ATP5EP56381 51 aaPredicted RBP7.57□□□□□ -1.2
UBBP4-202ENST00000584755 Q75L30 129 aa7.57□□□□□ -1.2
UBBP4-202ENST00000584755 ZCCHC13Q8WW36 166 aaKnown RBP7.57□□□□□ -1.2
UBBP4-202ENST00000584755 FAM236DA0A1B0GTK5 79 aa7.55□□□□□ -1.2
UBBP4-202ENST00000584755 FAM236CP0DP71 79 aa7.55□□□□□ -1.2
UBBP4-202ENST00000584755 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
UBBP4-202ENST00000584755 XP32Q5T750 250 aa7.55□□□□□ -1.2
UBBP4-202ENST00000584755 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
UBBP4-202ENST00000584755 LINC00208Q96KT6 92 aa7.54□□□□□ -1.2
UBBP4-202ENST00000584755 NDUFC1O43677 76 aa7.52□□□□□ -1.21
UBBP4-202ENST00000584755 C1orf64Q8NEQ6 169 aa7.52□□□□□ -1.21
UBBP4-202ENST00000584755 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
UBBP4-202ENST00000584755 LOC101927531A0A1B0GV80 90 aa7.49□□□□□ -1.21
UBBP4-202ENST00000584755 H7BZZ5 65 aa7.49□□□□□ -1.21
UBBP4-202ENST00000584755 IGKV2-30P06310 120 aa7.46□□□□□ -1.22
UBBP4-202ENST00000584755 LPAP08519 4548 aa7.46□□□□□ -1.22
UBBP4-202ENST00000584755 CYP4F30PQ9H0H9 118 aa7.44□□□□□ -1.22
UBBP4-202ENST00000584755 LRP2P98164 4655 aa7.42□□□□□ -1.22
UBBP4-202ENST00000584755 HERC1Q15751 4861 aa7.42□□□□□ -1.22
UBBP4-202ENST00000584755 ATP11AUNQ6ZP68 121 aa7.42□□□□□ -1.22
UBBP4-202ENST00000584755 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
UBBP4-202ENST00000584755 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
UBBP4-202ENST00000584755 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
UBBP4-202ENST00000584755 SPANXA2-OT1Q8N9U9 137 aa7.36□□□□□ -1.23
UBBP4-202ENST00000584755 HMCN2Q8NDA2 5059 aa7.35□□□□□ -1.23
UBBP4-202ENST00000584755 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
UBBP4-202ENST00000584755 SPINK7P58062 85 aa7.34□□□□□ -1.23
UBBP4-202ENST00000584755 HRES1P13985 223 aa7.31□□□□□ -1.24
UBBP4-202ENST00000584755 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
UBBP4-202ENST00000584755 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
UBBP4-202ENST00000584755 SEC61BP60468 96 aaKnown RBP7.29□□□□□ -1.24
UBBP4-202ENST00000584755 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
UBBP4-202ENST00000584755 LCE2BO14633 110 aa7.19□□□□□ -1.26
UBBP4-202ENST00000584755 Q1T7F1 81 aa7.19□□□□□ -1.26
UBBP4-202ENST00000584755 A8MUN3 132 aa7.17□□□□□ -1.26
UBBP4-202ENST00000584755 MPLKIPQ8TAP9 179 aa7.17□□□□□ -1.26
UBBP4-202ENST00000584755 COX6B2Q6YFQ2 88 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 368.6 ms