RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 FAT1Q14517 4588 aa5.31□□□□□ -1.56
CASC3-209ENST00000583902 Q6ZVQ6 151 aa5.31□□□□□ -1.56
CASC3-209ENST00000583902 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
CASC3-209ENST00000583902 KIAA1109Q2LD37 5005 aa5.31□□□□□ -1.56
CASC3-209ENST00000583902 HRCT1Q6UXD1 115 aa5.3□□□□□ -1.56
CASC3-209ENST00000583902 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
CASC3-209ENST00000583902 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
CASC3-209ENST00000583902 HERC2O95714 4834 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 A0A0G2JQZ4 141 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 BPY2O14599 106 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 NDUFB1O75438 58 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 MT1HL1P0DM35 61 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
CASC3-209ENST00000583902 FP248Q71RG6 208 aaPredicted RBP5.28□□□□□ -1.56
CASC3-209ENST00000583902 IMUPQ9GZP8 106 aa5.28□□□□□ -1.56
CASC3-209ENST00000583902 KRTAP9-3Q9BYQ3 159 aa5.27□□□□□ -1.57
CASC3-209ENST00000583902 C1orf195Q5TG92 126 aa5.26□□□□□ -1.57
CASC3-209ENST00000583902 CDIP1Q9H305 208 aa5.26□□□□□ -1.57
CASC3-209ENST00000583902 A8MWP4 228 aa5.25□□□□□ -1.57
CASC3-209ENST00000583902 Q96NJ1 140 aa5.25□□□□□ -1.57
CASC3-209ENST00000583902 IGKV4-1P06312 121 aa5.24□□□□□ -1.57
CASC3-209ENST00000583902 C8orf87E5RJ46 101 aa5.23□□□□□ -1.57
CASC3-209ENST00000583902 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
CASC3-209ENST00000583902 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
CASC3-209ENST00000583902 A0A1B0GVX0 72 aa5.2□□□□□ -1.58
CASC3-209ENST00000583902 DSCR10P59022 87 aa5.2□□□□□ -1.58
CASC3-209ENST00000583902 IGKV3D-7A0A0C4DH55 119 aa5.17□□□□□ -1.58
CASC3-209ENST00000583902 K7EQZ3 153 aa5.16□□□□□ -1.58
CASC3-209ENST00000583902 LINC00313P59037 77 aa5.16□□□□□ -1.58
CASC3-209ENST00000583902 HIST1H4AP62805 103 aaKnown RBP5.16□□□□□ -1.58
CASC3-209ENST00000583902 DEFB116Q30KQ4 102 aa5.16□□□□□ -1.58
CASC3-209ENST00000583902 IGLV7-46A0A075B6I9 117 aa5.15□□□□□ -1.59
CASC3-209ENST00000583902 HCG22E2RYF7 251 aa5.15□□□□□ -1.59
CASC3-209ENST00000583902 MT-ATP8P03928 68 aa5.15□□□□□ -1.59
CASC3-209ENST00000583902 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
CASC3-209ENST00000583902 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
CASC3-209ENST00000583902 C8orf17Q9NRJ1 99 aa5.14□□□□□ -1.59
CASC3-209ENST00000583902 LRP1Q07954 4544 aaKnown RBP5.13□□□□□ -1.59
CASC3-209ENST00000583902 hDV103S1A0JD37 113 aa5.13□□□□□ -1.59
CASC3-209ENST00000583902 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
CASC3-209ENST00000583902 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
CASC3-209ENST00000583902 ABCA13Q86UQ4 5058 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 MMP24-AS1A0A0U1RRL7 71 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 PRR4Q16378 134 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 RETNLBQ9BQ08 111 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 TP53AIP1Q9HCN2 124 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 MYCBP2O75592 4640 aa5.11□□□□□ -1.59
CASC3-209ENST00000583902 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
CASC3-209ENST00000583902 FAT3Q8TDW7 4589 aa5.1□□□□□ -1.59
CASC3-209ENST00000583902 TNXBP22105 4242 aa5.09□□□□□ -1.59
CASC3-209ENST00000583902 KRTAP13-3Q3SY46 172 aa5.09□□□□□ -1.59
CASC3-209ENST00000583902 Q8N9L7 120 aa5.09□□□□□ -1.59
CASC3-209ENST00000583902 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
CASC3-209ENST00000583902 ATOX1O00244 68 aa5.07□□□□□ -1.6
CASC3-209ENST00000583902 C20orf166-AS1Q96NR2 134 aa5.07□□□□□ -1.6
CASC3-209ENST00000583902 A0A087WVE0 104 aa5.06□□□□□ -1.6
CASC3-209ENST00000583902 Q75L30 129 aa5.06□□□□□ -1.6
CASC3-209ENST00000583902 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
CASC3-209ENST00000583902 FAM236AA0A1B0GUQ0 79 aa5.05□□□□□ -1.6
CASC3-209ENST00000583902 FAM236BA0A1B0GV22 79 aa5.05□□□□□ -1.6
CASC3-209ENST00000583902 A8MUU9 505 aa5.05□□□□□ -1.6
CASC3-209ENST00000583902 KRTAP16-1A8MUX0 517 aa5.05□□□□□ -1.6
CASC3-209ENST00000583902 KRTAP3-1Q9BYR8 98 aa5.05□□□□□ -1.6
CASC3-209ENST00000583902 UQCRQO14949 82 aa5.04□□□□□ -1.6
CASC3-209ENST00000583902 NOTCH2NLQ7Z3S9 236 aa5.04□□□□□ -1.6
CASC3-209ENST00000583902 C9orf92A6NGG3 77 aa5.02□□□□□ -1.61
CASC3-209ENST00000583902 H3BPC8 53 aa5.01□□□□□ -1.61
CASC3-209ENST00000583902 NDUFS5O43920 106 aa5.01□□□□□ -1.61
CASC3-209ENST00000583902 C5orf47Q569G3 176 aa5.01□□□□□ -1.61
CASC3-209ENST00000583902 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
CASC3-209ENST00000583902 RPL37P61927 97 aaKnown RBP5□□□□□ -1.61
CASC3-209ENST00000583902 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
CASC3-209ENST00000583902 OCR1Q9BZK8 76 aa5□□□□□ -1.61
CASC3-209ENST00000583902 SERP2Q8N6R1 65 aa4.99□□□□□ -1.61
CASC3-209ENST00000583902 MP68P56378 58 aa4.98□□□□□ -1.61
CASC3-209ENST00000583902 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
CASC3-209ENST00000583902 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
CASC3-209ENST00000583902 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
CASC3-209ENST00000583902 HERC1Q15751 4861 aa4.94□□□□□ -1.62
CASC3-209ENST00000583902 ANAPC13Q9BS18 74 aa4.94□□□□□ -1.62
CASC3-209ENST00000583902 LOC101927531A0A1B0GV80 90 aa4.93□□□□□ -1.62
CASC3-209ENST00000583902 COX7CP15954 63 aa4.92□□□□□ -1.62
CASC3-209ENST00000583902 H0Y9P7 68 aa4.91□□□□□ -1.62
CASC3-209ENST00000583902 Q5W150 140 aa4.89□□□□□ -1.63
CASC3-209ENST00000583902 C7orf65Q6ZTY9 151 aa4.89□□□□□ -1.63
CASC3-209ENST00000583902 UBR4Q5T4S7 5183 aa4.88□□□□□ -1.63
CASC3-209ENST00000583902 NDUFC1O43677 76 aa4.88□□□□□ -1.63
CASC3-209ENST00000583902 KLKP1Q107X0 134 aa4.88□□□□□ -1.63
CASC3-209ENST00000583902 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
CASC3-209ENST00000583902 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
CASC3-209ENST00000583902 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
CASC3-209ENST00000583902 A0A0U1RQV1 116 aa4.86□□□□□ -1.63
CASC3-209ENST00000583902 LINC00208Q96KT6 92 aa4.86□□□□□ -1.63
CASC3-209ENST00000583902 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
CASC3-209ENST00000583902 SPINK7P58062 85 aa4.84□□□□□ -1.63
CASC3-209ENST00000583902 C20orf197Q8N268 126 aa4.83□□□□□ -1.64
CASC3-209ENST00000583902 IGKV2D-30A0A075B6S6 120 aa4.82□□□□□ -1.64
CASC3-209ENST00000583902 SPANXA2-OT1Q8N9U9 137 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms