RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 RETNLBQ9BQ08 111 aa13.15□□□□□ -0.3
RARA-AS1-201ENST00000581080 A0A087WVE0 104 aa13.15□□□□□ -0.31
RARA-AS1-201ENST00000581080 J3QL48 77 aa13.15□□□□□ -0.31
RARA-AS1-201ENST00000581080 A0A1B0GVX0 72 aa13.13□□□□□ -0.31
RARA-AS1-201ENST00000581080 IGHV6-1A0A0B4J1U7 121 aa13.1□□□□□ -0.31
RARA-AS1-201ENST00000581080 PCP4P48539 62 aa13.04□□□□□ -0.32
RARA-AS1-201ENST00000581080 NOTCH2NLQ7Z3S9 236 aa13.03□□□□□ -0.32
RARA-AS1-201ENST00000581080 C8orf17Q9NRJ1 99 aa13.03□□□□□ -0.32
RARA-AS1-201ENST00000581080 HCG22E2RYF7 251 aa13.02□□□□□ -0.32
RARA-AS1-201ENST00000581080 FP248Q71RG6 208 aaPredicted RBP13.02□□□□□ -0.32
RARA-AS1-201ENST00000581080 MMP24-AS1A0A0U1RRL7 71 aa13.01□□□□□ -0.33
RARA-AS1-201ENST00000581080 C8orf87E5RJ46 101 aa13□□□□□ -0.33
RARA-AS1-201ENST00000581080 LINC00313P59037 77 aa12.99□□□□□ -0.33
RARA-AS1-201ENST00000581080 FAM236AA0A1B0GUQ0 79 aa12.99□□□□□ -0.33
RARA-AS1-201ENST00000581080 FAM236BA0A1B0GV22 79 aa12.99□□□□□ -0.33
RARA-AS1-201ENST00000581080 WFDC13Q8IUB5 93 aa12.97□□□□□ -0.33
RARA-AS1-201ENST00000581080 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
RARA-AS1-201ENST00000581080 CASC2Q6XLA1 102 aa12.97□□□□□ -0.33
RARA-AS1-201ENST00000581080 hDV103S1A0JD37 113 aa12.96□□□□□ -0.34
RARA-AS1-201ENST00000581080 SCGB1A1P11684 91 aa12.95□□□□□ -0.34
RARA-AS1-201ENST00000581080 IGLV7-46A0A075B6I9 117 aa12.94□□□□□ -0.34
RARA-AS1-201ENST00000581080 PRR4Q16378 134 aa12.91□□□□□ -0.34
RARA-AS1-201ENST00000581080 TMEM254Q8TBM7 123 aa12.88□□□□□ -0.35
RARA-AS1-201ENST00000581080 C9orf92A6NGG3 77 aa12.87□□□□□ -0.35
RARA-AS1-201ENST00000581080 MRPL34Q9BQ48 92 aaKnown RBP12.87□□□□□ -0.35
RARA-AS1-201ENST00000581080 KRTAP16-1A8MUX0 517 aa12.86□□□□□ -0.35
RARA-AS1-201ENST00000581080 ATOX1O00244 68 aa12.81□□□□□ -0.36
RARA-AS1-201ENST00000581080 KRTAP13-3Q3SY46 172 aa12.81□□□□□ -0.36
RARA-AS1-201ENST00000581080 Q8N9P0 234 aaPredicted RBP12.79□□□□□ -0.36
RARA-AS1-201ENST00000581080 OCR1Q9BZK8 76 aa12.76□□□□□ -0.37
RARA-AS1-201ENST00000581080 NDUFS5O43920 106 aa12.75□□□□□ -0.37
RARA-AS1-201ENST00000581080 TPRXLQ17RH7 258 aa12.75□□□□□ -0.37
RARA-AS1-201ENST00000581080 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
RARA-AS1-201ENST00000581080 C20orf166-AS1Q96NR2 134 aa12.71□□□□□ -0.38
RARA-AS1-201ENST00000581080 TP53AIP1Q9HCN2 124 aa12.7□□□□□ -0.38
RARA-AS1-201ENST00000581080 A8MUU9 505 aa12.68□□□□□ -0.38
RARA-AS1-201ENST00000581080 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
RARA-AS1-201ENST00000581080 TRAV7A0A075B6U4 112 aa12.67□□□□□ -0.38
RARA-AS1-201ENST00000581080 XP32Q5T750 250 aa12.66□□□□□ -0.38
RARA-AS1-201ENST00000581080 SERP2Q8N6R1 65 aa12.66□□□□□ -0.38
RARA-AS1-201ENST00000581080 UQCRQO14949 82 aa12.65□□□□□ -0.38
RARA-AS1-201ENST00000581080 Q75L30 129 aa12.64□□□□□ -0.39
RARA-AS1-201ENST00000581080 HERC1Q15751 4861 aa12.57□□□□□ -0.4
RARA-AS1-201ENST00000581080 Q5W150 140 aa12.57□□□□□ -0.4
RARA-AS1-201ENST00000581080 C5orf47Q569G3 176 aa12.56□□□□□ -0.4
RARA-AS1-201ENST00000581080 COX7CP15954 63 aa12.56□□□□□ -0.4
RARA-AS1-201ENST00000581080 RPL37P61927 97 aaKnown RBP12.56□□□□□ -0.4
RARA-AS1-201ENST00000581080 TRAV22A0A0B4J277 110 aa12.55□□□□□ -0.4
RARA-AS1-201ENST00000581080 LPAP08519 4548 aa12.54□□□□□ -0.4
RARA-AS1-201ENST00000581080 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
RARA-AS1-201ENST00000581080 H0Y9P7 68 aa12.5□□□□□ -0.41
RARA-AS1-201ENST00000581080 MP68P56378 58 aa12.48□□□□□ -0.41
RARA-AS1-201ENST00000581080 ATP11AUNQ6ZP68 121 aa12.48□□□□□ -0.41
RARA-AS1-201ENST00000581080 C20orf197Q8N268 126 aa12.43□□□□□ -0.42
RARA-AS1-201ENST00000581080 LRP2P98164 4655 aa12.42□□□□□ -0.42
RARA-AS1-201ENST00000581080 LINC00208Q96KT6 92 aa12.42□□□□□ -0.42
RARA-AS1-201ENST00000581080 H3BPC8 53 aa12.41□□□□□ -0.42
RARA-AS1-201ENST00000581080 CCDC179H3BU77 68 aa12.4□□□□□ -0.42
RARA-AS1-201ENST00000581080 A0A0U1RQV1 116 aa12.39□□□□□ -0.43
RARA-AS1-201ENST00000581080 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
RARA-AS1-201ENST00000581080 SNURFQ9Y675 71 aa12.37□□□□□ -0.43
RARA-AS1-201ENST00000581080 HMCN2Q8NDA2 5059 aa12.36□□□□□ -0.43
RARA-AS1-201ENST00000581080 KLKP1Q107X0 134 aa12.35□□□□□ -0.43
RARA-AS1-201ENST00000581080 PCOTHQ58A44 107 aa12.35□□□□□ -0.43
RARA-AS1-201ENST00000581080 LOC101927531A0A1B0GV80 90 aa12.34□□□□□ -0.43
RARA-AS1-201ENST00000581080 IGKV2-30P06310 120 aa12.33□□□□□ -0.44
RARA-AS1-201ENST00000581080 SEC61BP60468 96 aaKnown RBP12.31□□□□□ -0.44
RARA-AS1-201ENST00000581080 IGKV2D-30A0A075B6S6 120 aa12.29□□□□□ -0.44
RARA-AS1-201ENST00000581080 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
RARA-AS1-201ENST00000581080 SPINK7P58062 85 aa12.25□□□□□ -0.45
RARA-AS1-201ENST00000581080 C7orf65Q6ZTY9 151 aa12.25□□□□□ -0.45
RARA-AS1-201ENST00000581080 CYSTM1Q9H1C7 97 aa12.25□□□□□ -0.45
RARA-AS1-201ENST00000581080 NDUFC1O43677 76 aa12.18□□□□□ -0.46
RARA-AS1-201ENST00000581080 H7BZZ5 65 aa12.15□□□□□ -0.46
RARA-AS1-201ENST00000581080 HRES1P13985 223 aa12.07□□□□□ -0.48
RARA-AS1-201ENST00000581080 KRTAP4-1Q9BYQ7 146 aa12.05□□□□□ -0.48
RARA-AS1-201ENST00000581080 MUC17Q685J3 4493 aa12.03□□□□□ -0.48
RARA-AS1-201ENST00000581080 C4orf26Q17RF5 130 aa12□□□□□ -0.49
RARA-AS1-201ENST00000581080 SPANXA2-OT1Q8N9U9 137 aa12□□□□□ -0.49
RARA-AS1-201ENST00000581080 TMEM258P61165 79 aa11.95□□□□□ -0.5
RARA-AS1-201ENST00000581080 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
RARA-AS1-201ENST00000581080 COX6B2Q6YFQ2 88 aa11.89□□□□□ -0.51
RARA-AS1-201ENST00000581080 UBR4Q5T4S7 5183 aa11.88□□□□□ -0.51
RARA-AS1-201ENST00000581080 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
RARA-AS1-201ENST00000581080 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
RARA-AS1-201ENST00000581080 RBM12B-AS1Q9P1G2 102 aa11.86□□□□□ -0.51
RARA-AS1-201ENST00000581080 MUC2Q02817 5179 aa11.86□□□□□ -0.51
RARA-AS1-201ENST00000581080 DMAC1Q96GE9 116 aa11.84□□□□□ -0.51
RARA-AS1-201ENST00000581080 KRTAP3-1Q9BYR8 98 aa11.84□□□□□ -0.51
RARA-AS1-201ENST00000581080 ATP5EP56381 51 aaPredicted RBP11.84□□□□□ -0.51
RARA-AS1-201ENST00000581080 A8MUN3 132 aa11.81□□□□□ -0.52
RARA-AS1-201ENST00000581080 ACYP2P14621 99 aa11.75□□□□□ -0.53
RARA-AS1-201ENST00000581080 KRTAP19-2Q3LHN2 52 aa11.7□□□□□ -0.54
RARA-AS1-201ENST00000581080 H1FX-AS1Q4G0G2 97 aa11.67□□□□□ -0.54
RARA-AS1-201ENST00000581080 RNF213Q63HN8 5207 aa11.65□□□□□ -0.54
RARA-AS1-201ENST00000581080 COA5Q86WW8 74 aa11.62□□□□□ -0.55
RARA-AS1-201ENST00000581080 RPS28P62857 69 aaKnown RBP11.58□□□□□ -0.56
RARA-AS1-201ENST00000581080 SERP1Q9Y6X1 66 aa11.58□□□□□ -0.56
RARA-AS1-201ENST00000581080 CHKB-CPT1BH3BT56 60 aa11.54□□□□□ -0.56
RARA-AS1-201ENST00000581080 LCE2CQ5TA81 110 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms