RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 CEP295Q9C0D2 2601 aa3.22□□□□□ -1.89
DDX42-210ENST00000579539 H0YAA0 97 aa3.22□□□□□ -1.89
DDX42-210ENST00000579539 RELNP78509 3460 aa3.22□□□□□ -1.89
DDX42-210ENST00000579539 MYO9AB2RTY4 2548 aa3.22□□□□□ -1.89
DDX42-210ENST00000579539 AKAP9Q99996 3911 aa3.22□□□□□ -1.89
DDX42-210ENST00000579539 APCP25054 2843 aa3.21□□□□□ -1.9
DDX42-210ENST00000579539 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
DDX42-210ENST00000579539 CELSR2Q9HCU4 2923 aa3.21□□□□□ -1.9
DDX42-210ENST00000579539 GVINP1Q7Z2Y8 2422 aa3.21□□□□□ -1.9
DDX42-210ENST00000579539 A0A087WTM6 91 aa3.2□□□□□ -1.9
DDX42-210ENST00000579539 SPINK6Q6UWN8 80 aa3.2□□□□□ -1.9
DDX42-210ENST00000579539 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
DDX42-210ENST00000579539 TENM2Q9NT68 2774 aa3.19□□□□□ -1.9
DDX42-210ENST00000579539 LAMA5O15230 3695 aa3.19□□□□□ -1.9
DDX42-210ENST00000579539 RPL37P61927 97 aaKnown RBP3.19□□□□□ -1.9
DDX42-210ENST00000579539 NF1P21359 2839 aa3.19□□□□□ -1.9
DDX42-210ENST00000579539 ANKRD17O75179 2603 aaKnown RBP3.19□□□□□ -1.9
DDX42-210ENST00000579539 HIVEP3Q5T1R4 2406 aa3.18□□□□□ -1.9
DDX42-210ENST00000579539 KRTAP1-4P0C5Y4 121 aa3.18□□□□□ -1.9
DDX42-210ENST00000579539 SPACA4Q8TDM5 124 aa3.18□□□□□ -1.9
DDX42-210ENST00000579539 NBEAL2Q6ZNJ1 2754 aa3.17□□□□□ -1.9
DDX42-210ENST00000579539 A0A1B0GVY2 172 aa3.17□□□□□ -1.9
DDX42-210ENST00000579539 LCE3CQ5T5A8 94 aa3.17□□□□□ -1.9
DDX42-210ENST00000579539 PSORS1C2Q9UIG4 136 aa3.17□□□□□ -1.9
DDX42-210ENST00000579539 OTOGQ6ZRI0 2925 aa3.17□□□□□ -1.9
DDX42-210ENST00000579539 RIF1Q5UIP0 2472 aaKnown RBP3.17□□□□□ -1.9
DDX42-210ENST00000579539 DOPEY1Q5JWR5 2465 aa3.16□□□□□ -1.9
DDX42-210ENST00000579539 JMJD1CQ15652 2540 aa3.16□□□□□ -1.9
DDX42-210ENST00000579539 ZFYVE26Q68DK2 2539 aa3.15□□□□□ -1.91
DDX42-210ENST00000579539 SPINK1P00995 79 aa3.15□□□□□ -1.91
DDX42-210ENST00000579539 USP9YO00507 2555 aaPredicted RBP3.15□□□□□ -1.91
DDX42-210ENST00000579539 USP9XQ93008 2570 aaPredicted RBP3.15□□□□□ -1.91
DDX42-210ENST00000579539 ZFHX2Q9C0A1 2572 aaPredicted RBP3.15□□□□□ -1.91
DDX42-210ENST00000579539 TEX15Q9BXT5 2789 aa3.15□□□□□ -1.91
DDX42-210ENST00000579539 HIVEP2P31629 2446 aa3.14□□□□□ -1.91
DDX42-210ENST00000579539 FN1P02751 2386 aaKnown RBP3.14□□□□□ -1.91
DDX42-210ENST00000579539 GCN1Q92616 2671 aaKnown RBP3.14□□□□□ -1.91
DDX42-210ENST00000579539 NIPBLQ6KC79 2804 aaeCLIP3.13□□□□□ -1.91
DDX42-210ENST00000579539 VPS13CQ709C8 3753 aa3.13□□□□□ -1.91
DDX42-210ENST00000579539 SPTBN4Q9H254 2564 aa3.12□□□□□ -1.91
DDX42-210ENST00000579539 UBE2DNLQ8IWF7 75 aa3.12□□□□□ -1.91
DDX42-210ENST00000579539 BAHCC1Q9P281 2608 aa3.11□□□□□ -1.91
DDX42-210ENST00000579539 EPG5Q9HCE0 2579 aa3.1□□□□□ -1.91
DDX42-210ENST00000579539 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
DDX42-210ENST00000579539 RPS29P62273 56 aaKnown RBP3.1□□□□□ -1.91
DDX42-210ENST00000579539 PTPN13Q12923 2485 aa3.1□□□□□ -1.91
DDX42-210ENST00000579539 NAV2Q8IVL1 2488 aa3.1□□□□□ -1.91
DDX42-210ENST00000579539 CFAP46Q8IYW2 2715 aa3.09□□□□□ -1.91
DDX42-210ENST00000579539 FBN2P35556 2912 aa3.09□□□□□ -1.92
DDX42-210ENST00000579539 NBDYA0A0U1RRE5 68 aa3.08□□□□□ -1.92
DDX42-210ENST00000579539 TPRXLQ17RH7 258 aa3.08□□□□□ -1.92
DDX42-210ENST00000579539 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
DDX42-210ENST00000579539 ZANQ9Y493 2812 aa3.07□□□□□ -1.92
DDX42-210ENST00000579539 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
DDX42-210ENST00000579539 APLNQ9ULZ1 77 aa3.07□□□□□ -1.92
DDX42-210ENST00000579539 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
DDX42-210ENST00000579539 Q6ZRN7 208 aaPredicted RBP3.05□□□□□ -1.92
DDX42-210ENST00000579539 CSMD2Q7Z408 3487 aa3.04□□□□□ -1.92
DDX42-210ENST00000579539 SRRM2Q9UQ35 2752 aaKnown RBP3.04□□□□□ -1.92
DDX42-210ENST00000579539 MUC3AQ02505 3323 aa3.04□□□□□ -1.92
DDX42-210ENST00000579539 CENPEQ02224 2701 aa3.04□□□□□ -1.92
DDX42-210ENST00000579539 CHD8Q9HCK8 2581 aa3.03□□□□□ -1.93
DDX42-210ENST00000579539 F8P00451 2351 aa3.02□□□□□ -1.93
DDX42-210ENST00000579539 MTORP42345 2549 aa3.02□□□□□ -1.93
DDX42-210ENST00000579539 IGF2RP11717 2491 aa3.02□□□□□ -1.93
DDX42-210ENST00000579539 LRRK2Q5S007 2527 aa3.01□□□□□ -1.93
DDX42-210ENST00000579539 SONP18583 2426 aaKnown RBP3□□□□□ -1.93
DDX42-210ENST00000579539 PLAC4Q8WY50 150 aa3□□□□□ -1.93
DDX42-210ENST00000579539 TENM4Q6N022 2769 aa3□□□□□ -1.93
DDX42-210ENST00000579539 TTC28Q96AY4 2481 aa2.99□□□□□ -1.93
DDX42-210ENST00000579539 UBR5O95071 2799 aaPredicted RBP2.99□□□□□ -1.93
DDX42-210ENST00000579539 HIVEP1P15822 2718 aa2.99□□□□□ -1.93
DDX42-210ENST00000579539 M0QZ58 72 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 KRTAP13-2Q52LG2 175 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 S4R3F8 94 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 ITPR3Q14573 2671 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 ACACBO00763 2458 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 FLNCQ14315 2725 aa2.98□□□□□ -1.93
DDX42-210ENST00000579539 PIEZO1Q92508 2521 aa2.97□□□□□ -1.93
DDX42-210ENST00000579539 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
DDX42-210ENST00000579539 SETD2Q9BYW2 2564 aaPredicted RBP2.96□□□□□ -1.94
DDX42-210ENST00000579539 HELZ2Q9BYK8 2649 aaKnown RBP2.96□□□□□ -1.94
DDX42-210ENST00000579539 POLQO75417 2590 aa2.95□□□□□ -1.94
DDX42-210ENST00000579539 MYO18BQ8IUG5 2567 aa2.94□□□□□ -1.94
DDX42-210ENST00000579539 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
DDX42-210ENST00000579539 SMR3AQ99954 134 aa2.94□□□□□ -1.94
DDX42-210ENST00000579539 MUC6Q6W4X9 2439 aa2.93□□□□□ -1.94
DDX42-210ENST00000579539 HECTD1Q9ULT8 2610 aa2.93□□□□□ -1.94
DDX42-210ENST00000579539 VWFP04275 2813 aa2.93□□□□□ -1.94
DDX42-210ENST00000579539 A0A0D9SG42 100 aa2.92□□□□□ -1.94
DDX42-210ENST00000579539 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
DDX42-210ENST00000579539 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
DDX42-210ENST00000579539 FLG2Q5D862 2391 aaPredicted RBP2.91□□□□□ -1.94
DDX42-210ENST00000579539 PDZD2O15018 2839 aa2.91□□□□□ -1.94
DDX42-210ENST00000579539 VPS13DQ5THJ4 4388 aa2.91□□□□□ -1.94
DDX42-210ENST00000579539 CCDC168Q8NDH2 2452 aa2.91□□□□□ -1.94
DDX42-210ENST00000579539 FLNAP21333 2647 aaKnown RBP2.9□□□□□ -1.94
DDX42-210ENST00000579539 USP24Q9UPU5 2620 aa2.9□□□□□ -1.94
DDX42-210ENST00000579539 PKD1L1Q8TDX9 2849 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms