RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 H3BT86 120 aa3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 SMCPP49901 116 aaPredicted RBP3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 PRO0461Q9UI25 63 aa3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 A0A1W2PNM2 257 aa3.83□□□□□ -1.8
CDK5RAP3-209ENST00000578663 CD164Q04900 197 aa3.83□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TRBV7-4A0A0J9YYF1 115 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TRBV7-7A0A0K0K1E9 115 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LIMD2Q9BT23 127 aa3.81□□□□□ -1.8
CDK5RAP3-209ENST00000578663 F8W1H4 67 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 JMJD7-PLA2G4BH0Y9G9 81 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q5XG85 94 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q6Q795 121 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C14orf132Q9NPU4 83 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 A0A087WSZ3 146 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LOC110117498A0A087WWA1 95 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 CCKP06307 115 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q6ZQT0 140 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
CDK5RAP3-209ENST00000578663 K7ERU9 68 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 PDE6GP18545 87 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 ETDBQ3ZM63 59 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 Q96NJ1 140 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 J3QR89 54 aa3.74□□□□□ -1.81
CDK5RAP3-209ENST00000578663 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
CDK5RAP3-209ENST00000578663 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
CDK5RAP3-209ENST00000578663 C21orf62-AS1Q17RA5 79 aa3.72□□□□□ -1.81
CDK5RAP3-209ENST00000578663 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CDK5RAP3-209ENST00000578663 A0A1B0GW54 56 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 MT2AP02795 61 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 IGKV4-1P06312 121 aa3.7□□□□□ -1.82
CDK5RAP3-209ENST00000578663 NREPQ16612 68 aa3.68□□□□□ -1.82
CDK5RAP3-209ENST00000578663 Q6ZVQ6 151 aa3.68□□□□□ -1.82
CDK5RAP3-209ENST00000578663 MT1FP04733 61 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 DSCR10P59022 87 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 J3KT08 172 aa3.66□□□□□ -1.82
CDK5RAP3-209ENST00000578663 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
CDK5RAP3-209ENST00000578663 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A8MWP4 228 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 BPY2O14599 106 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 K7EQZ3 153 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 ACYP1P07311 99 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 LINC00313P59037 77 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 Q75L30 129 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 Q8N9L7 120 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C8orf87E5RJ46 101 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 NDUFB1O75438 58 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C8orf17Q9NRJ1 99 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
CDK5RAP3-209ENST00000578663 MMP24-AS1A0A0U1RRL7 71 aa3.6□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A8MUU9 505 aa3.6□□□□□ -1.83
CDK5RAP3-209ENST00000578663 CXCL6P80162 114 aa3.58□□□□□ -1.84
CDK5RAP3-209ENST00000578663 SCGB1A1P11684 91 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 WFDC13Q8IUB5 93 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 TMEM254Q8TBM7 123 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 MRPL34Q9BQ48 92 aaKnown RBP3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
CDK5RAP3-209ENST00000578663 CASC2Q6XLA1 102 aa3.55□□□□□ -1.84
CDK5RAP3-209ENST00000578663 MT-ATP8P03928 68 aa3.54□□□□□ -1.84
CDK5RAP3-209ENST00000578663 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
CDK5RAP3-209ENST00000578663 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 FAM236CP0DP71 79 aa3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 HIST1H4AP62805 103 aaKnown RBP3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 A0A087WVE0 104 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 NDUFS5O43920 106 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 PCP4P48539 62 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
CDK5RAP3-209ENST00000578663 Q5W150 140 aa3.49□□□□□ -1.85
CDK5RAP3-209ENST00000578663 HRES1P13985 223 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2EP22531 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2BP35325 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2AP35326 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPINK7P58062 85 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms