RNA–Protein interactions for RNA: ENST00000578402.5

LIMD2-205, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-205ENST00000578402 A0A1B0GVX0 72 aa13.07□□□□□ -0.32
LIMD2-205ENST00000578402 FAT3Q8TDW7 4589 aa13.03□□□□□ -0.32
LIMD2-205ENST00000578402 SMIM20Q8N5G0 67 aa13.03□□□□□ -0.32
LIMD2-205ENST00000578402 LRP1Q07954 4544 aaKnown RBP13.01□□□□□ -0.33
LIMD2-205ENST00000578402 MMP24-AS1A0A0U1RRL7 71 aa13□□□□□ -0.33
LIMD2-205ENST00000578402 IGHV6-1A0A0B4J1U7 121 aa12.99□□□□□ -0.33
LIMD2-205ENST00000578402 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
LIMD2-205ENST00000578402 C8orf17Q9NRJ1 99 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 TNXBP22105 4242 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 CASC2Q6XLA1 102 aa12.98□□□□□ -0.33
LIMD2-205ENST00000578402 WFDC13Q8IUB5 93 aa12.97□□□□□ -0.33
LIMD2-205ENST00000578402 SERP2Q8N6R1 65 aa12.96□□□□□ -0.33
LIMD2-205ENST00000578402 HERC1Q15751 4861 aa12.95□□□□□ -0.34
LIMD2-205ENST00000578402 C8orf87E5RJ46 101 aa12.95□□□□□ -0.34
LIMD2-205ENST00000578402 TRAV7A0A075B6U4 112 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 hDV103S1A0JD37 113 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 OXTP01178 125 aa12.93□□□□□ -0.34
LIMD2-205ENST00000578402 OCR1Q9BZK8 76 aa12.91□□□□□ -0.34
LIMD2-205ENST00000578402 COX7CP15954 63 aa12.9□□□□□ -0.34
LIMD2-205ENST00000578402 MT1HL1P0DM35 61 aa12.88□□□□□ -0.35
LIMD2-205ENST00000578402 TMEM254Q8TBM7 123 aa12.88□□□□□ -0.35
LIMD2-205ENST00000578402 UQCRQO14949 82 aa12.87□□□□□ -0.35
LIMD2-205ENST00000578402 NOTCH2NLQ7Z3S9 236 aa12.87□□□□□ -0.35
LIMD2-205ENST00000578402 FLG2Q5D862 2391 aaPredicted RBP12.86□□□□□ -0.35
LIMD2-205ENST00000578402 LINC00313P59037 77 aa12.84□□□□□ -0.35
LIMD2-205ENST00000578402 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
LIMD2-205ENST00000578402 MRPL34Q9BQ48 92 aaKnown RBP12.83□□□□□ -0.35
LIMD2-205ENST00000578402 DMBT1Q9UGM3 2413 aaPredicted RBP12.8□□□□□ -0.36
LIMD2-205ENST00000578402 CCDC179H3BU77 68 aa12.78□□□□□ -0.36
LIMD2-205ENST00000578402 TP53AIP1Q9HCN2 124 aa12.76□□□□□ -0.37
LIMD2-205ENST00000578402 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
LIMD2-205ENST00000578402 KRTAP16-1A8MUX0 517 aa12.72□□□□□ -0.37
LIMD2-205ENST00000578402 FP248Q71RG6 208 aaPredicted RBP12.72□□□□□ -0.37
LIMD2-205ENST00000578402 C5orf47Q569G3 176 aa12.71□□□□□ -0.38
LIMD2-205ENST00000578402 Q8N9P0 234 aaPredicted RBP12.7□□□□□ -0.38
LIMD2-205ENST00000578402 NDUFS5O43920 106 aa12.69□□□□□ -0.38
LIMD2-205ENST00000578402 C20orf197Q8N268 126 aa12.67□□□□□ -0.38
LIMD2-205ENST00000578402 KLKP1Q107X0 134 aa12.64□□□□□ -0.39
LIMD2-205ENST00000578402 TRAV22A0A0B4J277 110 aa12.62□□□□□ -0.39
LIMD2-205ENST00000578402 MP68P56378 58 aa12.62□□□□□ -0.39
LIMD2-205ENST00000578402 A0A0U1RQV1 116 aa12.61□□□□□ -0.39
LIMD2-205ENST00000578402 H3BPC8 53 aa12.59□□□□□ -0.39
LIMD2-205ENST00000578402 H0Y9P7 68 aa12.58□□□□□ -0.4
LIMD2-205ENST00000578402 C9orf92A6NGG3 77 aa12.57□□□□□ -0.4
LIMD2-205ENST00000578402 IGLV7-46A0A075B6I9 117 aa12.55□□□□□ -0.4
LIMD2-205ENST00000578402 SNURFQ9Y675 71 aa12.55□□□□□ -0.4
LIMD2-205ENST00000578402 ZCCHC13Q8WW36 166 aaKnown RBP12.53□□□□□ -0.4
LIMD2-205ENST00000578402 J3QL48 77 aa12.52□□□□□ -0.4
LIMD2-205ENST00000578402 C20orf166-AS1Q96NR2 134 aa12.52□□□□□ -0.4
LIMD2-205ENST00000578402 NDUFC1O43677 76 aa12.52□□□□□ -0.41
LIMD2-205ENST00000578402 CYSTM1Q9H1C7 97 aa12.52□□□□□ -0.41
LIMD2-205ENST00000578402 KRTAP13-3Q3SY46 172 aa12.51□□□□□ -0.41
LIMD2-205ENST00000578402 A8MUU9 505 aa12.5□□□□□ -0.41
LIMD2-205ENST00000578402 LINC00208Q96KT6 92 aa12.5□□□□□ -0.41
LIMD2-205ENST00000578402 Q5W150 140 aa12.48□□□□□ -0.41
LIMD2-205ENST00000578402 C1orf64Q8NEQ6 169 aa12.47□□□□□ -0.41
LIMD2-205ENST00000578402 PRR4Q16378 134 aa12.44□□□□□ -0.42
LIMD2-205ENST00000578402 H7BZZ5 65 aa12.43□□□□□ -0.42
LIMD2-205ENST00000578402 Q75L30 129 aa12.42□□□□□ -0.42
LIMD2-205ENST00000578402 LOC101927531A0A1B0GV80 90 aa12.41□□□□□ -0.42
LIMD2-205ENST00000578402 TMEM258P61165 79 aa12.39□□□□□ -0.43
LIMD2-205ENST00000578402 TPRXLQ17RH7 258 aa12.37□□□□□ -0.43
LIMD2-205ENST00000578402 XP32Q5T750 250 aa12.33□□□□□ -0.44
LIMD2-205ENST00000578402 HMCN2Q8NDA2 5059 aa12.31□□□□□ -0.44
LIMD2-205ENST00000578402 IGKV2-30P06310 120 aa12.3□□□□□ -0.44
LIMD2-205ENST00000578402 UBR4Q5T4S7 5183 aa12.3□□□□□ -0.44
LIMD2-205ENST00000578402 RPL37P61927 97 aaKnown RBP12.29□□□□□ -0.44
LIMD2-205ENST00000578402 CYP4F30PQ9H0H9 118 aa12.29□□□□□ -0.44
LIMD2-205ENST00000578402 ATP5EP56381 51 aaPredicted RBP12.25□□□□□ -0.45
LIMD2-205ENST00000578402 FAM236DA0A1B0GTK5 79 aa12.24□□□□□ -0.45
LIMD2-205ENST00000578402 FAM236CP0DP71 79 aa12.24□□□□□ -0.45
LIMD2-205ENST00000578402 ATP11AUNQ6ZP68 121 aa12.21□□□□□ -0.45
LIMD2-205ENST00000578402 SPANXA2-OT1Q8N9U9 137 aa12.21□□□□□ -0.45
LIMD2-205ENST00000578402 PCOTHQ58A44 107 aa12.2□□□□□ -0.46
LIMD2-205ENST00000578402 IGKV2D-30A0A075B6S6 120 aa12.19□□□□□ -0.46
LIMD2-205ENST00000578402 C7orf65Q6ZTY9 151 aa12.19□□□□□ -0.46
LIMD2-205ENST00000578402 HRES1P13985 223 aa12.07□□□□□ -0.48
LIMD2-205ENST00000578402 SPINK7P58062 85 aa12.06□□□□□ -0.48
LIMD2-205ENST00000578402 LPAP08519 4548 aa12.05□□□□□ -0.48
LIMD2-205ENST00000578402 LRP2P98164 4655 aa12.03□□□□□ -0.48
LIMD2-205ENST00000578402 SERP1Q9Y6X1 66 aa11.99□□□□□ -0.49
LIMD2-205ENST00000578402 RPS28P62857 69 aaKnown RBP11.97□□□□□ -0.49
LIMD2-205ENST00000578402 SEC61BP60468 96 aaKnown RBP11.94□□□□□ -0.5
LIMD2-205ENST00000578402 DMAC1Q96GE9 116 aa11.93□□□□□ -0.5
LIMD2-205ENST00000578402 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
LIMD2-205ENST00000578402 C4orf26Q17RF5 130 aa11.86□□□□□ -0.51
LIMD2-205ENST00000578402 A8MUN3 132 aa11.85□□□□□ -0.51
LIMD2-205ENST00000578402 ACYP2P14621 99 aa11.85□□□□□ -0.51
LIMD2-205ENST00000578402 MUC17Q685J3 4493 aa11.81□□□□□ -0.52
LIMD2-205ENST00000578402 COA5Q86WW8 74 aa11.8□□□□□ -0.52
LIMD2-205ENST00000578402 COX6B2Q6YFQ2 88 aa11.78□□□□□ -0.52
LIMD2-205ENST00000578402 KRTAP3-1Q9BYR8 98 aa11.72□□□□□ -0.53
LIMD2-205ENST00000578402 MPLKIPQ8TAP9 179 aa11.69□□□□□ -0.54
LIMD2-205ENST00000578402 SMIM26A0A096LP01 95 aa11.67□□□□□ -0.54
LIMD2-205ENST00000578402 CHKB-CPT1BH3BT56 60 aa11.64□□□□□ -0.55
LIMD2-205ENST00000578402 RBM12B-AS1Q9P1G2 102 aa11.62□□□□□ -0.55
LIMD2-205ENST00000578402 KRTAP4-1Q9BYQ7 146 aa11.6□□□□□ -0.55
LIMD2-205ENST00000578402 H1FX-AS1Q4G0G2 97 aa11.5□□□□□ -0.57
LIMD2-205ENST00000578402 Q1T7F1 81 aa11.46□□□□□ -0.57
LIMD2-205ENST00000578402 SPTSSBQ8NFR3 76 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms