RNA–Protein interactions for RNA: ENST00000577598.5

BRIP1-202, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRIP1, Length 3,969 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-202ENST00000577598 RPS27P42677 84 aaKnown RBP2.04□□□□□ -2.08
BRIP1-202ENST00000577598 CRYBG3Q68DQ2 2970 aa2.04□□□□□ -2.08
BRIP1-202ENST00000577598 STAB1Q9NY15 2570 aa2.04□□□□□ -2.08
BRIP1-202ENST00000577598 IGLV5-48A0A075B6I7 105 aa2.04□□□□□ -2.08
BRIP1-202ENST00000577598 DNAH14Q0VDD8 3507 aa2.04□□□□□ -2.08
BRIP1-202ENST00000577598 KRTAP10-5P60370 271 aa2.03□□□□□ -2.08
BRIP1-202ENST00000577598 MKI67P46013 3256 aaKnown RBP2.03□□□□□ -2.08
BRIP1-202ENST00000577598 CSMD3Q7Z407 3707 aa2.03□□□□□ -2.08
BRIP1-202ENST00000577598 MGAQ8IWI9 3026 aa2.03□□□□□ -2.09
BRIP1-202ENST00000577598 XIRP2A4UGR9 3374 aa2.01□□□□□ -2.09
BRIP1-202ENST00000577598 DEFB133Q30KQ1 61 aa2.01□□□□□ -2.09
BRIP1-202ENST00000577598 KRTAP6-3Q3LI67 103 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 DEFB110Q30KQ9 67 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 CDH23Q9H251 3354 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 WT1-ASQ06250 92 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 ITPR1Q14643 2758 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 STATHP02808 62 aa2□□□□□ -2.09
BRIP1-202ENST00000577598 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
BRIP1-202ENST00000577598 DMXL1Q9Y485 3027 aa1.99□□□□□ -2.09
BRIP1-202ENST00000577598 STAB2Q8WWQ8 2551 aa1.99□□□□□ -2.09
BRIP1-202ENST00000577598 CEP295Q9C0D2 2601 aa1.99□□□□□ -2.09
BRIP1-202ENST00000577598 POLR2KP53803 58 aaKnown RBP1.99□□□□□ -2.09
BRIP1-202ENST00000577598 KALRNO60229 2985 aa1.99□□□□□ -2.09
BRIP1-202ENST00000577598 RANBP2P49792 3224 aaKnown RBP1.98□□□□□ -2.09
BRIP1-202ENST00000577598 SPTBN5Q9NRC6 3674 aaKnown RBP1.98□□□□□ -2.09
BRIP1-202ENST00000577598 PRKDCP78527 4128 aaKnown RBP1.97□□□□□ -2.09
BRIP1-202ENST00000577598 COX6B2Q6YFQ2 88 aa1.97□□□□□ -2.09
BRIP1-202ENST00000577598 DEFB108BQ8NET1 73 aa1.97□□□□□ -2.09
BRIP1-202ENST00000577598 VCANP13611 3396 aa1.97□□□□□ -2.09
BRIP1-202ENST00000577598 TEX15Q9BXT5 2789 aa1.97□□□□□ -2.09
BRIP1-202ENST00000577598 LAMA1P25391 3075 aa1.96□□□□□ -2.09
BRIP1-202ENST00000577598 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
BRIP1-202ENST00000577598 WDFY3Q8IZQ1 3526 aa1.96□□□□□ -2.1
BRIP1-202ENST00000577598 HUWE1Q7Z6Z7 4374 aaKnown RBP1.96□□□□□ -2.1
BRIP1-202ENST00000577598 AKAP9Q99996 3911 aa1.96□□□□□ -2.1
BRIP1-202ENST00000577598 PRCDQ00LT1 54 aa1.95□□□□□ -2.1
BRIP1-202ENST00000577598 PRUNE2Q8WUY3 3088 aa1.95□□□□□ -2.1
BRIP1-202ENST00000577598 ANKRD11Q6UB99 2663 aaPredicted RBP1.95□□□□□ -2.1
BRIP1-202ENST00000577598 NBEAL1Q6ZS30 2694 aa1.95□□□□□ -2.1
BRIP1-202ENST00000577598 NBEAQ8NFP9 2946 aa1.95□□□□□ -2.1
BRIP1-202ENST00000577598 CFAP54Q96N23 3096 aa1.95□□□□□ -2.1
BRIP1-202ENST00000577598 ADGRG4Q8IZF6 3080 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 H3BUA1 57 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 TMEM167AQ8TBQ9 72 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 SPEGQ15772 3267 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 ANK2Q01484 3957 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 KRTAP12-4P60329 112 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 S4R3F8 94 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 MYO15AQ9UKN7 3530 aa1.94□□□□□ -2.1
BRIP1-202ENST00000577598 CELSR1Q9NYQ6 3014 aa1.93□□□□□ -2.1
BRIP1-202ENST00000577598 TRIOO75962 3097 aa1.93□□□□□ -2.1
BRIP1-202ENST00000577598 FRYLO94915 3013 aa1.93□□□□□ -2.1
BRIP1-202ENST00000577598 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
BRIP1-202ENST00000577598 A0A096LNI7 61 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 LINC01546A6NGU7 62 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 KRTAP17-1Q9BYP8 105 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 EYSQ5T1H1 3165 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 KRTAP4-8A0A0G2JLE6 195 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 TENM3Q9P273 2699 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 LYNX1G3V0Z9 82 aa1.92□□□□□ -2.1
BRIP1-202ENST00000577598 DEFB108AA8MXU0 73 aa1.91□□□□□ -2.1
BRIP1-202ENST00000577598 BSNQ9UPA5 3926 aa1.91□□□□□ -2.1
BRIP1-202ENST00000577598 DEFB135Q30KP9 77 aa1.91□□□□□ -2.1
BRIP1-202ENST00000577598 FLNBO75369 2602 aaKnown RBP1.9□□□□□ -2.1
BRIP1-202ENST00000577598 U3KQA8 63 aa1.9□□□□□ -2.1
BRIP1-202ENST00000577598 SPENQ96T58 3664 aaKnown RBP1.9□□□□□ -2.11
BRIP1-202ENST00000577598 TLN1Q9Y490 2541 aaKnown RBP1.89□□□□□ -2.11
BRIP1-202ENST00000577598 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
BRIP1-202ENST00000577598 FREM2Q5SZK8 3169 aa1.89□□□□□ -2.11
BRIP1-202ENST00000577598 FRYQ5TBA9 3013 aa1.89□□□□□ -2.11
BRIP1-202ENST00000577598 COL6A3P12111 3177 aa1.88□□□□□ -2.11
BRIP1-202ENST00000577598 DEFB124Q8NES8 71 aa1.88□□□□□ -2.11
BRIP1-202ENST00000577598 VWFP04275 2813 aa1.88□□□□□ -2.11
BRIP1-202ENST00000577598 HTN1P15515 57 aa1.87□□□□□ -2.11
BRIP1-202ENST00000577598 DMDP11532 3685 aa1.87□□□□□ -2.11
BRIP1-202ENST00000577598 RPL39P5Q59GN2 51 aa1.86□□□□□ -2.11
BRIP1-202ENST00000577598 COL6A5A8TX70 2615 aa1.86□□□□□ -2.11
BRIP1-202ENST00000577598 HECTD4Q9Y4D8 3996 aa1.86□□□□□ -2.11
BRIP1-202ENST00000577598 H3BUX3 64 aa1.86□□□□□ -2.11
BRIP1-202ENST00000577598 PKD1L1Q8TDX9 2849 aa1.85□□□□□ -2.11
BRIP1-202ENST00000577598 CELSR3Q9NYQ7 3312 aa1.85□□□□□ -2.11
BRIP1-202ENST00000577598 RHPN1-AS1Q9BWJ2 59 aa1.85□□□□□ -2.11
BRIP1-202ENST00000577598 TGP01266 2768 aa1.85□□□□□ -2.11
BRIP1-202ENST00000577598 VPS13AQ96RL7 3174 aa1.85□□□□□ -2.11
BRIP1-202ENST00000577598 H3BNG1 76 aa1.84□□□□□ -2.12
BRIP1-202ENST00000577598 NOTCH1P46531 2555 aa1.84□□□□□ -2.12
BRIP1-202ENST00000577598 CFAP47Q6ZTR5 3102 aa1.84□□□□□ -2.12
BRIP1-202ENST00000577598 SPART-AS1P0CW21 52 aa1.83□□□□□ -2.12
BRIP1-202ENST00000577598 ZFHX4Q86UP3 3567 aa1.83□□□□□ -2.12
BRIP1-202ENST00000577598 M0QY20 66 aa1.83□□□□□ -2.12
BRIP1-202ENST00000577598 WDFY4Q6ZS81 3184 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 MMP24-AS1A0A0U1RRL7 71 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 Q5VSD8 79 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 SMG1Q96Q15 3661 aaKnown RBP1.82□□□□□ -2.12
BRIP1-202ENST00000577598 APELAP0DMC3 54 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 DEFB131AP59861 70 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 KRTAP4-9Q9BYQ8 210 aa1.82□□□□□ -2.12
BRIP1-202ENST00000577598 ZANQ9Y493 2812 aa1.81□□□□□ -2.12
BRIP1-202ENST00000577598 K7EIM0 57 aa1.81□□□□□ -2.12
BRIP1-202ENST00000577598 LOC400499M0QZD8 3231 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms