RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ATP11AUNQ6ZP68 121 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 MPLKIPQ8TAP9 179 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 SND1-IT1Q9HBX3 110 aa3.28□□□□□ -1.88
SMG6-219ENST00000575663 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
SMG6-219ENST00000575663 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
SMG6-219ENST00000575663 IGLV8-61A0A075B6I0 122 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 IGKV2-28A0A075B6P5 120 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 TEX49A0A1B0GTD5 131 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 IGKV2D-28P01615 120 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 Q1T7F1 81 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 Q6JHZ5 121 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 NOTCH2NLQ7Z3S9 236 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
SMG6-219ENST00000575663 ZNF706Q9Y5V0 76 aaPredicted RBP3.27□□□□□ -1.89
SMG6-219ENST00000575663 IGHV6-1A0A0B4J1U7 121 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 H0YGX0 51 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 H7BZZ5 65 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 COX6B2Q6YFQ2 88 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 C20orf197Q8N268 126 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 Q8NBF4 154 aa3.26□□□□□ -1.89
SMG6-219ENST00000575663 IGLV5-37A0A075B6J1 123 aa3.25□□□□□ -1.89
SMG6-219ENST00000575663 TRAV7A0A075B6U4 112 aa3.25□□□□□ -1.89
SMG6-219ENST00000575663 RPS29P62273 56 aaKnown RBP3.25□□□□□ -1.89
SMG6-219ENST00000575663 SOSTDC1Q6X4U4 206 aa3.25□□□□□ -1.89
SMG6-219ENST00000575663 CLEC2BQ92478 149 aa3.25□□□□□ -1.89
SMG6-219ENST00000575663 H3BQ85 93 aa3.24□□□□□ -1.89
SMG6-219ENST00000575663 PCOTHQ58A44 107 aa3.24□□□□□ -1.89
SMG6-219ENST00000575663 SPRR4Q96PI1 79 aa3.24□□□□□ -1.89
SMG6-219ENST00000575663 HIGD2AQ9BW72 106 aa3.24□□□□□ -1.89
SMG6-219ENST00000575663 IGLV6-57P01721 117 aa3.23□□□□□ -1.89
SMG6-219ENST00000575663 Q1RN00 199 aa3.23□□□□□ -1.89
SMG6-219ENST00000575663 Q8N377 158 aa3.23□□□□□ -1.89
SMG6-219ENST00000575663 A0A1B0GW54 56 aa3.22□□□□□ -1.89
SMG6-219ENST00000575663 F8WEM9 126 aa3.22□□□□□ -1.89
SMG6-219ENST00000575663 A6NN06 94 aa3.21□□□□□ -1.9
SMG6-219ENST00000575663 KCNQ1DNQ9H478 68 aa3.21□□□□□ -1.9
SMG6-219ENST00000575663 TRBV10-3A0A0K0K1G6 114 aa3.2□□□□□ -1.9
SMG6-219ENST00000575663 DNAL4O96015 105 aa3.2□□□□□ -1.9
SMG6-219ENST00000575663 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
SMG6-219ENST00000575663 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
SMG6-219ENST00000575663 TRAV23DV6A0A075B6W5 121 aa3.19□□□□□ -1.9
SMG6-219ENST00000575663 H7C2G1 150 aa3.19□□□□□ -1.9
SMG6-219ENST00000575663 MOBPQ13875 183 aa3.19□□□□□ -1.9
SMG6-219ENST00000575663 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
SMG6-219ENST00000575663 SMCR5Q8TEV8 140 aa3.19□□□□□ -1.9
SMG6-219ENST00000575663 IGLV9-49A0A0B4J1Y8 123 aa3.18□□□□□ -1.9
SMG6-219ENST00000575663 ERC2-IT1O76042 136 aa3.18□□□□□ -1.9
SMG6-219ENST00000575663 SPRR1AP35321 89 aa3.18□□□□□ -1.9
SMG6-219ENST00000575663 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
SMG6-219ENST00000575663 DHRS4-AS1Q9P1J3 65 aa3.18□□□□□ -1.9
SMG6-219ENST00000575663 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 KRTAP4-16G5E9R7 235 aaPredicted RBP3.17□□□□□ -1.9
SMG6-219ENST00000575663 NCR3O14931 201 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 COX7BP24311 80 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 ELOF1P60002 83 aaKnown RBP3.17□□□□□ -1.9
SMG6-219ENST00000575663 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.17□□□□□ -1.9
SMG6-219ENST00000575663 LINC00575Q6W349 94 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 Q8NDZ9 215 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 NEBP20929 6669 aa3.17□□□□□ -1.9
SMG6-219ENST00000575663 HCG22E2RYF7 251 aa3.16□□□□□ -1.9
SMG6-219ENST00000575663 LINC00483Q53H64 154 aa3.16□□□□□ -1.9
SMG6-219ENST00000575663 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
SMG6-219ENST00000575663 LIMD2Q9BT23 127 aa3.16□□□□□ -1.9
SMG6-219ENST00000575663 JMJD7-PLA2G4BH0Y9G9 81 aa3.15□□□□□ -1.91
SMG6-219ENST00000575663 Q6ZRX8 168 aa3.15□□□□□ -1.91
SMG6-219ENST00000575663 LINC00846Q9NV44 126 aa3.15□□□□□ -1.91
SMG6-219ENST00000575663 ORMDL1Q9P0S3 153 aa3.15□□□□□ -1.91
SMG6-219ENST00000575663 TRAV22A0A0B4J277 110 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 IGKV3D-7A0A0C4DH55 119 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 ETDCA0A1B0GVM5 59 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 CHKB-CPT1BH3BT56 60 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 BAALC-AS2P0C853 105 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 PDE6GP18545 87 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
SMG6-219ENST00000575663 hDV103S1A0JD37 113 aa3.13□□□□□ -1.91
SMG6-219ENST00000575663 CASC2Q6XLA1 102 aa3.13□□□□□ -1.91
SMG6-219ENST00000575663 FAM218AQ96MZ4 157 aa3.13□□□□□ -1.91
SMG6-219ENST00000575663 IGLV5-48A0A075B6I7 105 aa3.12□□□□□ -1.91
SMG6-219ENST00000575663 A0A087WVE0 104 aa3.12□□□□□ -1.91
SMG6-219ENST00000575663 RPL37P61927 97 aaKnown RBP3.12□□□□□ -1.91
SMG6-219ENST00000575663 OBSCN-AS1Q96MR7 158 aa3.12□□□□□ -1.91
SMG6-219ENST00000575663 Q6ZQY7 126 aa3.11□□□□□ -1.91
SMG6-219ENST00000575663 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
SMG6-219ENST00000575663 A6NED7 52 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 KRTAP16-1A8MUX0 517 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 SPRR1BP22528 89 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 TMEM254Q8TBM7 123 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 UBL5Q9BZL1 73 aa3.1□□□□□ -1.91
SMG6-219ENST00000575663 LOC110117498A0A087WWA1 95 aa3.09□□□□□ -1.91
SMG6-219ENST00000575663 Q5VV11 94 aa3.09□□□□□ -1.91
SMG6-219ENST00000575663 Q9BRP9 147 aa3.09□□□□□ -1.91
SMG6-219ENST00000575663 KRTAP6-3Q3LI67 103 aa3.08□□□□□ -1.92
SMG6-219ENST00000575663 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
SMG6-219ENST00000575663 TRBV7-4A0A0J9YYF1 115 aa3.07□□□□□ -1.92
SMG6-219ENST00000575663 LCE2BO14633 110 aa3.07□□□□□ -1.92
SMG6-219ENST00000575663 K7ERS5 55 aa3.06□□□□□ -1.92
SMG6-219ENST00000575663 NREPQ16612 68 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms