RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 LRP1Q07954 4544 aaKnown RBP6.32□□□□□ -1.4
PDXDC1-216ENST00000569715 PRR4Q16378 134 aa6.32□□□□□ -1.4
PDXDC1-216ENST00000569715 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
PDXDC1-216ENST00000569715 A8MWP4 228 aa6.29□□□□□ -1.4
PDXDC1-216ENST00000569715 TMEM254Q8TBM7 123 aa6.28□□□□□ -1.4
PDXDC1-216ENST00000569715 FLG2Q5D862 2391 aaPredicted RBP6.28□□□□□ -1.4
PDXDC1-216ENST00000569715 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
PDXDC1-216ENST00000569715 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
PDXDC1-216ENST00000569715 TNXBP22105 4242 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 NDUFC1O43677 76 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 OXTP01178 125 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 Q8N1X5 172 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 C4orf48Q5BLP8 95 aa6.26□□□□□ -1.41
PDXDC1-216ENST00000569715 H7BZZ5 65 aa6.25□□□□□ -1.41
PDXDC1-216ENST00000569715 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
PDXDC1-216ENST00000569715 Q5XG85 94 aa6.25□□□□□ -1.41
PDXDC1-216ENST00000569715 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
PDXDC1-216ENST00000569715 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
PDXDC1-216ENST00000569715 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
PDXDC1-216ENST00000569715 C1orf195Q5TG92 126 aa6.24□□□□□ -1.41
PDXDC1-216ENST00000569715 SPINK1P00995 79 aa6.24□□□□□ -1.41
PDXDC1-216ENST00000569715 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
PDXDC1-216ENST00000569715 IGHV6-1A0A0B4J1U7 121 aa6.23□□□□□ -1.41
PDXDC1-216ENST00000569715 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
PDXDC1-216ENST00000569715 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
PDXDC1-216ENST00000569715 NDUFB1O75438 58 aa6.22□□□□□ -1.41
PDXDC1-216ENST00000569715 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
PDXDC1-216ENST00000569715 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
PDXDC1-216ENST00000569715 KRTAP4-5Q9BYR2 181 aa6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 V9GYY9 64 aa6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 ATP5EP56381 51 aaPredicted RBP6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 SPAG11AQ6PDA7 123 aa6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
PDXDC1-216ENST00000569715 PSPHP1O15172 72 aa6.19□□□□□ -1.42
PDXDC1-216ENST00000569715 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
PDXDC1-216ENST00000569715 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
PDXDC1-216ENST00000569715 OCR1Q9BZK8 76 aa6.19□□□□□ -1.42
PDXDC1-216ENST00000569715 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
PDXDC1-216ENST00000569715 RPS29P62273 56 aaKnown RBP6.18□□□□□ -1.42
PDXDC1-216ENST00000569715 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
PDXDC1-216ENST00000569715 MP68P56378 58 aa6.17□□□□□ -1.42
PDXDC1-216ENST00000569715 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
PDXDC1-216ENST00000569715 SPTSSBQ8NFR3 76 aa6.15□□□□□ -1.42
PDXDC1-216ENST00000569715 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.43
PDXDC1-216ENST00000569715 HERC2O95714 4834 aa6.14□□□□□ -1.43
PDXDC1-216ENST00000569715 MT1HL1P0DM35 61 aa6.13□□□□□ -1.43
PDXDC1-216ENST00000569715 DMBT1Q9UGM3 2413 aaPredicted RBP6.13□□□□□ -1.43
PDXDC1-216ENST00000569715 LINC00208Q96KT6 92 aa6.11□□□□□ -1.43
PDXDC1-216ENST00000569715 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
PDXDC1-216ENST00000569715 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
PDXDC1-216ENST00000569715 LINC00313P59037 77 aa6.1□□□□□ -1.43
PDXDC1-216ENST00000569715 C8orf87E5RJ46 101 aa6.1□□□□□ -1.43
PDXDC1-216ENST00000569715 NDUFS5O43920 106 aa6.09□□□□□ -1.44
PDXDC1-216ENST00000569715 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
PDXDC1-216ENST00000569715 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
PDXDC1-216ENST00000569715 PMAIP1Q13794 54 aa6.07□□□□□ -1.44
PDXDC1-216ENST00000569715 SEC61GP60059 68 aa6.06□□□□□ -1.44
PDXDC1-216ENST00000569715 C9orf92A6NGG3 77 aa6.05□□□□□ -1.44
PDXDC1-216ENST00000569715 C1orf64Q8NEQ6 169 aa6.04□□□□□ -1.44
PDXDC1-216ENST00000569715 A6NED7 52 aa6.03□□□□□ -1.44
PDXDC1-216ENST00000569715 H0Y9P7 68 aa6.03□□□□□ -1.44
PDXDC1-216ENST00000569715 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
PDXDC1-216ENST00000569715 PRR15LQ9BU68 103 aa6.02□□□□□ -1.45
PDXDC1-216ENST00000569715 TP53AIP1Q9HCN2 124 aa6.02□□□□□ -1.45
PDXDC1-216ENST00000569715 TRAV22A0A0B4J277 110 aa6.02□□□□□ -1.45
PDXDC1-216ENST00000569715 A8MUN3 132 aa6.02□□□□□ -1.45
PDXDC1-216ENST00000569715 Q5W150 140 aa6.02□□□□□ -1.45
PDXDC1-216ENST00000569715 PCOTHQ58A44 107 aa6□□□□□ -1.45
PDXDC1-216ENST00000569715 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
PDXDC1-216ENST00000569715 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
PDXDC1-216ENST00000569715 PCLOQ9Y6V0 5065 aa5.96□□□□□ -1.46
PDXDC1-216ENST00000569715 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
PDXDC1-216ENST00000569715 H3BPC8 53 aa5.93□□□□□ -1.46
PDXDC1-216ENST00000569715 C20orf166-AS1Q96NR2 134 aa5.93□□□□□ -1.46
PDXDC1-216ENST00000569715 A8MUU9 505 aa5.92□□□□□ -1.46
PDXDC1-216ENST00000569715 J3QL48 77 aa5.91□□□□□ -1.46
PDXDC1-216ENST00000569715 LPAP08519 4548 aa5.88□□□□□ -1.47
PDXDC1-216ENST00000569715 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
PDXDC1-216ENST00000569715 XP32Q5T750 250 aa5.87□□□□□ -1.47
PDXDC1-216ENST00000569715 CYP4F30PQ9H0H9 118 aa5.87□□□□□ -1.47
PDXDC1-216ENST00000569715 Q75L30 129 aa5.86□□□□□ -1.47
PDXDC1-216ENST00000569715 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
PDXDC1-216ENST00000569715 IGKV2D-30A0A075B6S6 120 aa5.85□□□□□ -1.47
PDXDC1-216ENST00000569715 Q1T7F1 81 aa5.85□□□□□ -1.47
PDXDC1-216ENST00000569715 LRP2P98164 4655 aa5.84□□□□□ -1.47
PDXDC1-216ENST00000569715 COA5Q86WW8 74 aa5.83□□□□□ -1.48
PDXDC1-216ENST00000569715 TPRXLQ17RH7 258 aa5.82□□□□□ -1.48
PDXDC1-216ENST00000569715 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
PDXDC1-216ENST00000569715 HERC1Q15751 4861 aa5.82□□□□□ -1.48
PDXDC1-216ENST00000569715 A8MU10 97 aa5.8□□□□□ -1.48
PDXDC1-216ENST00000569715 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
PDXDC1-216ENST00000569715 HRES1P13985 223 aa5.79□□□□□ -1.48
PDXDC1-216ENST00000569715 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
PDXDC1-216ENST00000569715 ATP11AUNQ6ZP68 121 aa5.78□□□□□ -1.48
PDXDC1-216ENST00000569715 Q5VV11 94 aa5.77□□□□□ -1.49
PDXDC1-216ENST00000569715 SPINK7P58062 85 aa5.75□□□□□ -1.49
PDXDC1-216ENST00000569715 KTN1-AS1Q86SY8 53 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms