RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 C9orf153Q5TBE3 101 aa3.38□□□□□ -1.87
SF3B3-210ENST00000567654 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
SF3B3-210ENST00000567654 UBL5Q9BZL1 73 aa3.38□□□□□ -1.87
SF3B3-210ENST00000567654 A0A087X002 238 aa3.37□□□□□ -1.87
SF3B3-210ENST00000567654 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
SF3B3-210ENST00000567654 NOTCH2NLQ7Z3S9 236 aa3.37□□□□□ -1.87
SF3B3-210ENST00000567654 Q8N9L7 120 aa3.37□□□□□ -1.87
SF3B3-210ENST00000567654 ZNF706Q9Y5V0 76 aaPredicted RBP3.37□□□□□ -1.87
SF3B3-210ENST00000567654 LRP1Q07954 4544 aaKnown RBP3.37□□□□□ -1.87
SF3B3-210ENST00000567654 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 A0A087WSZ3 146 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 FAM236AA0A1B0GUQ0 79 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 FAM236BA0A1B0GV22 79 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 BPY2O14599 106 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
SF3B3-210ENST00000567654 DEFB116Q30KQ4 102 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 HRCT1Q6UXD1 115 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 IMUPQ9GZP8 106 aa3.36□□□□□ -1.87
SF3B3-210ENST00000567654 IGKV4-1P06312 121 aa3.35□□□□□ -1.87
SF3B3-210ENST00000567654 DSCR10P59022 87 aa3.35□□□□□ -1.87
SF3B3-210ENST00000567654 RPL37AP61513 92 aaKnown RBP3.35□□□□□ -1.87
SF3B3-210ENST00000567654 NREPQ16612 68 aa3.35□□□□□ -1.87
SF3B3-210ENST00000567654 ATP5EP2Q5VTU8 51 aa3.35□□□□□ -1.87
SF3B3-210ENST00000567654 CXCL6P80162 114 aa3.34□□□□□ -1.87
SF3B3-210ENST00000567654 KRTAP5-11Q6L8G4 156 aa3.34□□□□□ -1.87
SF3B3-210ENST00000567654 Q96NJ1 140 aa3.34□□□□□ -1.87
SF3B3-210ENST00000567654 A0A1B0GW54 56 aa3.33□□□□□ -1.88
SF3B3-210ENST00000567654 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
SF3B3-210ENST00000567654 LINC00472Q9H8W2 130 aa3.33□□□□□ -1.88
SF3B3-210ENST00000567654 K7EQZ3 153 aa3.32□□□□□ -1.88
SF3B3-210ENST00000567654 KRTAP10-7P60409 375 aaPredicted RBP3.31□□□□□ -1.88
SF3B3-210ENST00000567654 FAM229BQ4G0N7 80 aa3.31□□□□□ -1.88
SF3B3-210ENST00000567654 ANAPC13Q9BS18 74 aa3.31□□□□□ -1.88
SF3B3-210ENST00000567654 CCDC179H3BU77 68 aa3.3□□□□□ -1.88
SF3B3-210ENST00000567654 SPINK6Q6UWN8 80 aa3.3□□□□□ -1.88
SF3B3-210ENST00000567654 SSBP3-AS1Q7Z2R9 100 aa3.29□□□□□ -1.88
SF3B3-210ENST00000567654 MYCBP2O75592 4640 aa3.28□□□□□ -1.88
SF3B3-210ENST00000567654 ATOX1O00244 68 aa3.28□□□□□ -1.88
SF3B3-210ENST00000567654 A8MWP4 228 aa3.27□□□□□ -1.89
SF3B3-210ENST00000567654 CD164Q04900 197 aa3.27□□□□□ -1.89
SF3B3-210ENST00000567654 Q5VSD8 79 aa3.27□□□□□ -1.89
SF3B3-210ENST00000567654 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
SF3B3-210ENST00000567654 MMP24-AS1A0A0U1RRL7 71 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 CDK2AP2O75956 126 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 WFDC13Q8IUB5 93 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 SS18L2Q9UHA2 77 aa3.26□□□□□ -1.89
SF3B3-210ENST00000567654 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 HERC2O95714 4834 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 HCG22E2RYF7 251 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 COX7CP15954 63 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
SF3B3-210ENST00000567654 ABCA13Q86UQ4 5058 aa3.24□□□□□ -1.89
SF3B3-210ENST00000567654 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
SF3B3-210ENST00000567654 J3KT08 172 aa3.24□□□□□ -1.89
SF3B3-210ENST00000567654 ASB16-AS1Q495Z4 193 aa3.24□□□□□ -1.89
SF3B3-210ENST00000567654 C1orf195Q5TG92 126 aa3.24□□□□□ -1.89
SF3B3-210ENST00000567654 FLG2Q5D862 2391 aaPredicted RBP3.24□□□□□ -1.89
SF3B3-210ENST00000567654 A0A1B0GVX0 72 aa3.23□□□□□ -1.89
SF3B3-210ENST00000567654 UQCRQO14949 82 aa3.23□□□□□ -1.89
SF3B3-210ENST00000567654 Q5XG85 94 aa3.23□□□□□ -1.89
SF3B3-210ENST00000567654 LINC00304Q8N9R0 145 aa3.23□□□□□ -1.89
SF3B3-210ENST00000567654 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
SF3B3-210ENST00000567654 IGHV6-1A0A0B4J1U7 121 aa3.22□□□□□ -1.89
SF3B3-210ENST00000567654 CASC2Q6XLA1 102 aa3.22□□□□□ -1.89
SF3B3-210ENST00000567654 hDV103S1A0JD37 113 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 KRTAP16-1A8MUX0 517 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 SPINK1P00995 79 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 C20orf197Q8N268 126 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 LIMD2Q9BT23 127 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 SNURFQ9Y675 71 aa3.2□□□□□ -1.9
SF3B3-210ENST00000567654 NDUFB1O75438 58 aa3.19□□□□□ -1.9
SF3B3-210ENST00000567654 IGLV7-46A0A075B6I9 117 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 NDUFAF8A1L188 74 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 MT1HL1P0DM35 61 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
SF3B3-210ENST00000567654 SMIM20Q8N5G0 67 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 TMEM254Q8TBM7 123 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 RETNLBQ9BQ08 111 aa3.18□□□□□ -1.9
SF3B3-210ENST00000567654 MRPL34Q9BQ48 92 aaKnown RBP3.18□□□□□ -1.9
SF3B3-210ENST00000567654 SPAG11AQ6PDA7 123 aa3.17□□□□□ -1.9
SF3B3-210ENST00000567654 ZCCHC13Q8WW36 166 aaKnown RBP3.17□□□□□ -1.9
SF3B3-210ENST00000567654 LPAP08519 4548 aa3.16□□□□□ -1.9
SF3B3-210ENST00000567654 C8orf87E5RJ46 101 aa3.16□□□□□ -1.9
SF3B3-210ENST00000567654 KLKP1Q107X0 134 aa3.16□□□□□ -1.9
SF3B3-210ENST00000567654 H0Y9P7 68 aa3.15□□□□□ -1.91
SF3B3-210ENST00000567654 H7BZZ5 65 aa3.15□□□□□ -1.91
SF3B3-210ENST00000567654 LINC00313P59037 77 aa3.15□□□□□ -1.91
SF3B3-210ENST00000567654 KRTAP13-3Q3SY46 172 aa3.15□□□□□ -1.91
SF3B3-210ENST00000567654 Q5W150 140 aa3.15□□□□□ -1.91
SF3B3-210ENST00000567654 NDUFS5O43920 106 aa3.14□□□□□ -1.91
SF3B3-210ENST00000567654 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
SF3B3-210ENST00000567654 C9orf92A6NGG3 77 aa3.13□□□□□ -1.91
SF3B3-210ENST00000567654 C5orf47Q569G3 176 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms