RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 A0A1B0GV72 72 aa9.94□□□□□ -0.82
LINC01238-205ENST00000567549 VPS25Q9BRG1 176 aa9.94□□□□□ -0.82
LINC01238-205ENST00000567549 CRCT1Q9UGL9 99 aa9.94□□□□□ -0.82
LINC01238-205ENST00000567549 A0A0G2JQZ4 141 aa9.93□□□□□ -0.82
LINC01238-205ENST00000567549 TRBV7-4A0A0J9YYF1 115 aa9.93□□□□□ -0.82
LINC01238-205ENST00000567549 Q6ZQT0 140 aa9.93□□□□□ -0.82
LINC01238-205ENST00000567549 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
LINC01238-205ENST00000567549 ATP11AUNQ6ZP68 121 aa9.9□□□□□ -0.82
LINC01238-205ENST00000567549 A0A1B0GW54 56 aa9.88□□□□□ -0.83
LINC01238-205ENST00000567549 IGFL1Q6UW32 110 aa9.87□□□□□ -0.83
LINC01238-205ENST00000567549 SS18L2Q9UHA2 77 aa9.87□□□□□ -0.83
LINC01238-205ENST00000567549 LORP23490 312 aaPredicted RBP9.86□□□□□ -0.83
LINC01238-205ENST00000567549 KRTAP10-6P60371 365 aaPredicted RBP9.84□□□□□ -0.83
LINC01238-205ENST00000567549 Q75L30 129 aa9.83□□□□□ -0.84
LINC01238-205ENST00000567549 SIGMAR1Q99720 223 aa9.82□□□□□ -0.84
LINC01238-205ENST00000567549 FSIP2Q5CZC0 6907 aa9.82□□□□□ -0.84
LINC01238-205ENST00000567549 LINC00643Q86TS7 51 aa9.81□□□□□ -0.84
LINC01238-205ENST00000567549 LINC00846Q9NV44 126 aa9.81□□□□□ -0.84
LINC01238-205ENST00000567549 UBL5Q9BZL1 73 aa9.8□□□□□ -0.84
LINC01238-205ENST00000567549 A0A1W2PNM2 257 aa9.77□□□□□ -0.85
LINC01238-205ENST00000567549 Q6Q795 121 aa9.76□□□□□ -0.85
LINC01238-205ENST00000567549 Q96NJ1 140 aa9.74□□□□□ -0.85
LINC01238-205ENST00000567549 MT-ATP8P03928 68 aa9.71□□□□□ -0.86
LINC01238-205ENST00000567549 NREPQ16612 68 aa9.71□□□□□ -0.86
LINC01238-205ENST00000567549 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.86
LINC01238-205ENST00000567549 Q6ZVQ6 151 aa9.7□□□□□ -0.86
LINC01238-205ENST00000567549 IMUPQ9GZP8 106 aa9.69□□□□□ -0.86
LINC01238-205ENST00000567549 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
LINC01238-205ENST00000567549 A0A087WSZ3 146 aa9.64□□□□□ -0.87
LINC01238-205ENST00000567549 CXCL6P80162 114 aa9.64□□□□□ -0.87
LINC01238-205ENST00000567549 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
LINC01238-205ENST00000567549 A8MUU9 505 aa9.62□□□□□ -0.87
LINC01238-205ENST00000567549 SCGB1A1P11684 91 aa9.61□□□□□ -0.87
LINC01238-205ENST00000567549 FLGP20930 4061 aaPredicted RBP9.6□□□□□ -0.87
LINC01238-205ENST00000567549 BPY2O14599 106 aa9.59□□□□□ -0.87
LINC01238-205ENST00000567549 LINC00313P59037 77 aa9.54□□□□□ -0.88
LINC01238-205ENST00000567549 HIST1H4AP62805 103 aaKnown RBP9.53□□□□□ -0.88
LINC01238-205ENST00000567549 J3KT08 172 aa9.52□□□□□ -0.89
LINC01238-205ENST00000567549 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
LINC01238-205ENST00000567549 IGKV4-1P06312 121 aa9.51□□□□□ -0.89
LINC01238-205ENST00000567549 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
LINC01238-205ENST00000567549 DSCR10P59022 87 aa9.51□□□□□ -0.89
LINC01238-205ENST00000567549 LINC00472Q9H8W2 130 aa9.51□□□□□ -0.89
LINC01238-205ENST00000567549 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
LINC01238-205ENST00000567549 FAM236AA0A1B0GUQ0 79 aa9.43□□□□□ -0.9
LINC01238-205ENST00000567549 FAM236BA0A1B0GV22 79 aa9.43□□□□□ -0.9
LINC01238-205ENST00000567549 NDUFB1O75438 58 aa9.43□□□□□ -0.9
LINC01238-205ENST00000567549 DEFB116Q30KQ4 102 aa9.43□□□□□ -0.9
LINC01238-205ENST00000567549 A0A087WVE0 104 aa9.42□□□□□ -0.9
LINC01238-205ENST00000567549 A8MWP4 228 aa9.42□□□□□ -0.9
LINC01238-205ENST00000567549 Q8N9L7 120 aa9.4□□□□□ -0.9
LINC01238-205ENST00000567549 C8orf87E5RJ46 101 aa9.39□□□□□ -0.91
LINC01238-205ENST00000567549 PRR15Q8IV56 129 aa9.39□□□□□ -0.91
LINC01238-205ENST00000567549 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
LINC01238-205ENST00000567549 KRTAP16-1A8MUX0 517 aa9.38□□□□□ -0.91
LINC01238-205ENST00000567549 K7EQZ3 153 aa9.38□□□□□ -0.91
LINC01238-205ENST00000567549 ATOX1O00244 68 aa9.38□□□□□ -0.91
LINC01238-205ENST00000567549 KRTAP9-8Q9BYQ0 159 aa9.38□□□□□ -0.91
LINC01238-205ENST00000567549 PCP4P48539 62 aa9.34□□□□□ -0.91
LINC01238-205ENST00000567549 ANAPC13Q9BS18 74 aa9.34□□□□□ -0.91
LINC01238-205ENST00000567549 SMIM20Q8N5G0 67 aa9.33□□□□□ -0.92
LINC01238-205ENST00000567549 A0A1B0GVX0 72 aa9.32□□□□□ -0.92
LINC01238-205ENST00000567549 HCG22E2RYF7 251 aa9.32□□□□□ -0.92
LINC01238-205ENST00000567549 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
LINC01238-205ENST00000567549 HRES1P13985 223 aa9.29□□□□□ -0.92
LINC01238-205ENST00000567549 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
LINC01238-205ENST00000567549 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
LINC01238-205ENST00000567549 ZCCHC13Q8WW36 166 aaKnown RBP9.25□□□□□ -0.93
LINC01238-205ENST00000567549 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
LINC01238-205ENST00000567549 TRAV7A0A075B6U4 112 aa9.24□□□□□ -0.93
LINC01238-205ENST00000567549 MT2AP02795 61 aa9.24□□□□□ -0.93
LINC01238-205ENST00000567549 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
LINC01238-205ENST00000567549 MMP24-AS1A0A0U1RRL7 71 aa9.23□□□□□ -0.93
LINC01238-205ENST00000567549 KRTAP10-10P60014 251 aa9.23□□□□□ -0.93
LINC01238-205ENST00000567549 hDV103S1A0JD37 113 aa9.22□□□□□ -0.93
LINC01238-205ENST00000567549 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.22□□□□□ -0.93
LINC01238-205ENST00000567549 WFDC13Q8IUB5 93 aa9.22□□□□□ -0.93
LINC01238-205ENST00000567549 KRTAP9-7A8MTY7 169 aa9.21□□□□□ -0.94
LINC01238-205ENST00000567549 COX7CP15954 63 aa9.2□□□□□ -0.94
LINC01238-205ENST00000567549 UQCRQO14949 82 aa9.18□□□□□ -0.94
LINC01238-205ENST00000567549 SPINK7P58062 85 aa9.18□□□□□ -0.94
LINC01238-205ENST00000567549 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
LINC01238-205ENST00000567549 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
LINC01238-205ENST00000567549 USH2AO75445 5202 aa9.18□□□□□ -0.94
LINC01238-205ENST00000567549 Q8N9P0 234 aaPredicted RBP9.15□□□□□ -0.94
LINC01238-205ENST00000567549 MRPL34Q9BQ48 92 aaKnown RBP9.15□□□□□ -0.94
LINC01238-205ENST00000567549 MT1FP04733 61 aa9.14□□□□□ -0.95
LINC01238-205ENST00000567549 TP53AIP1Q9HCN2 124 aa9.13□□□□□ -0.95
LINC01238-205ENST00000567549 SSPOA2VEC9 5147 aa9.13□□□□□ -0.95
LINC01238-205ENST00000567549 C5orf47Q569G3 176 aa9.1□□□□□ -0.95
LINC01238-205ENST00000567549 KRTAP9-3Q9BYQ3 159 aa9.1□□□□□ -0.95
LINC01238-205ENST00000567549 CCDC179H3BU77 68 aa9.08□□□□□ -0.96
LINC01238-205ENST00000567549 NDUFS5O43920 106 aa9.06□□□□□ -0.96
LINC01238-205ENST00000567549 KRTAP19-1Q8IUB9 90 aa9.05□□□□□ -0.96
LINC01238-205ENST00000567549 MP68P56378 58 aa9.03□□□□□ -0.96
LINC01238-205ENST00000567549 C20orf197Q8N268 126 aa9.02□□□□□ -0.97
LINC01238-205ENST00000567549 FCGBPQ9Y6R7 5405 aaPredicted RBP9.01□□□□□ -0.97
LINC01238-205ENST00000567549 H3BPC8 53 aa9.01□□□□□ -0.97
LINC01238-205ENST00000567549 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
LINC01238-205ENST00000567549 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms