RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 KRTAP10-1P60331 282 aa14.01□□□□□ -0.17
LINC00543-201ENST00000567234 RYR3Q15413 4870 aa14.01□□□□□ -0.17
LINC00543-201ENST00000567234 LOC101927531A0A1B0GV80 90 aa14□□□□□ -0.17
LINC00543-201ENST00000567234 Q75L30 129 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 H0Y9P7 68 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 ATP11AUNQ6ZP68 121 aa13.99□□□□□ -0.17
LINC00543-201ENST00000567234 IGLV9-49A0A0B4J1Y8 123 aa13.97□□□□□ -0.17
LINC00543-201ENST00000567234 CASC2Q6XLA1 102 aa13.95□□□□□ -0.18
LINC00543-201ENST00000567234 A0A1B0GVY2 172 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 KTN1-AS1Q86SY8 53 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 PKHD1P08F94 4074 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 PRR4Q16378 134 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 WFDC13Q8IUB5 93 aa13.94□□□□□ -0.18
LINC00543-201ENST00000567234 A8MWP4 228 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 CHKB-CPT1BH3BT56 60 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 NDUFS5O43920 106 aa13.93□□□□□ -0.18
LINC00543-201ENST00000567234 IGLV7-46A0A075B6I9 117 aa13.9□□□□□ -0.18
LINC00543-201ENST00000567234 LINC00472Q9H8W2 130 aa13.89□□□□□ -0.19
LINC00543-201ENST00000567234 MOBPQ13875 183 aa13.87□□□□□ -0.19
LINC00543-201ENST00000567234 PRR15LQ9BU68 103 aa13.86□□□□□ -0.19
LINC00543-201ENST00000567234 DEFB116Q30KQ4 102 aa13.85□□□□□ -0.19
LINC00543-201ENST00000567234 ANAPC11Q9NYG5 84 aa13.85□□□□□ -0.19
LINC00543-201ENST00000567234 TP53AIP1Q9HCN2 124 aa13.84□□□□□ -0.19
LINC00543-201ENST00000567234 CDC42SE1Q9NRR8 79 aa13.82□□□□□ -0.2
LINC00543-201ENST00000567234 COA5Q86WW8 74 aa13.8□□□□□ -0.2
LINC00543-201ENST00000567234 LRP1BQ9NZR2 4599 aa13.79□□□□□ -0.2
LINC00543-201ENST00000567234 LINC01558Q9Y6Z2 57 aa13.78□□□□□ -0.2
LINC00543-201ENST00000567234 SSBP3-AS1Q7Z2R9 100 aa13.77□□□□□ -0.21
LINC00543-201ENST00000567234 DYNC1H1Q14204 4646 aaKnown RBP13.76□□□□□ -0.21
LINC00543-201ENST00000567234 A6NED7 52 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 A6NN06 94 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 Q96NJ1 140 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 ASB16-AS1Q495Z4 193 aa13.74□□□□□ -0.21
LINC00543-201ENST00000567234 LCA10Q71F78 164 aa13.73□□□□□ -0.21
LINC00543-201ENST00000567234 MMP24-AS1A0A0U1RRL7 71 aa13.71□□□□□ -0.21
LINC00543-201ENST00000567234 A8MU10 97 aa13.65□□□□□ -0.22
LINC00543-201ENST00000567234 RBM12B-AS1Q9P1G2 102 aa13.64□□□□□ -0.23
LINC00543-201ENST00000567234 SPTSSBQ8NFR3 76 aa13.64□□□□□ -0.23
LINC00543-201ENST00000567234 C7orf65Q6ZTY9 151 aa13.63□□□□□ -0.23
LINC00543-201ENST00000567234 A0A087X002 238 aa13.61□□□□□ -0.23
LINC00543-201ENST00000567234 APOBP04114 4563 aaKnown RBP13.61□□□□□ -0.23
LINC00543-201ENST00000567234 KRTAP1-4P0C5Y4 121 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 VPS13BQ7Z7G8 4022 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 KRTAP13-2Q52LG2 175 aa13.6□□□□□ -0.23
LINC00543-201ENST00000567234 CDK2AP2O75956 126 aa13.56□□□□□ -0.24
LINC00543-201ENST00000567234 A0A1B0GVX0 72 aa13.55□□□□□ -0.24
LINC00543-201ENST00000567234 SPINK6Q6UWN8 80 aa13.55□□□□□ -0.24
LINC00543-201ENST00000567234 SMR3BP02814 79 aaPredicted RBP13.53□□□□□ -0.24
LINC00543-201ENST00000567234 EPPK1P58107 5090 aaKnown RBP13.53□□□□□ -0.24
LINC00543-201ENST00000567234 C8orf17Q9NRJ1 99 aa13.51□□□□□ -0.25
LINC00543-201ENST00000567234 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
LINC00543-201ENST00000567234 IGHV6-1A0A0B4J1U7 121 aa13.46□□□□□ -0.25
LINC00543-201ENST00000567234 SPAG11AQ6PDA7 123 aa13.45□□□□□ -0.26
LINC00543-201ENST00000567234 HRES1P13985 223 aa13.44□□□□□ -0.26
LINC00543-201ENST00000567234 PCOTHQ58A44 107 aa13.43□□□□□ -0.26
LINC00543-201ENST00000567234 FAT1Q14517 4588 aa13.42□□□□□ -0.26
LINC00543-201ENST00000567234 TYMSOSQ8TAI1 123 aa13.4□□□□□ -0.26
LINC00543-201ENST00000567234 MRPL34Q9BQ48 92 aaKnown RBP13.4□□□□□ -0.26
LINC00543-201ENST00000567234 HSPG2P98160 4391 aa13.37□□□□□ -0.27
LINC00543-201ENST00000567234 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
LINC00543-201ENST00000567234 C8orf87E5RJ46 101 aa13.35□□□□□ -0.27
LINC00543-201ENST00000567234 KRTAP10-4P60372 401 aaPredicted RBP13.35□□□□□ -0.27
LINC00543-201ENST00000567234 SPINK1P00995 79 aa13.34□□□□□ -0.27
LINC00543-201ENST00000567234 SPINK7P58062 85 aa13.34□□□□□ -0.27
LINC00543-201ENST00000567234 NOTCH2NLQ7Z3S9 236 aa13.32□□□□□ -0.28
LINC00543-201ENST00000567234 KIAA1109Q2LD37 5005 aa13.32□□□□□ -0.28
LINC00543-201ENST00000567234 KRTAP17-1Q9BYP8 105 aa13.31□□□□□ -0.28
LINC00543-201ENST00000567234 RYR1P21817 5038 aa13.29□□□□□ -0.28
LINC00543-201ENST00000567234 RPS29P62273 56 aaKnown RBP13.29□□□□□ -0.28
LINC00543-201ENST00000567234 ACYP2P14621 99 aa13.28□□□□□ -0.28
LINC00543-201ENST00000567234 PRR26Q8N8Z3 221 aa13.27□□□□□ -0.28
LINC00543-201ENST00000567234 LINC00304Q8N9R0 145 aa13.24□□□□□ -0.29
LINC00543-201ENST00000567234 LINC00313P59037 77 aa13.23□□□□□ -0.29
LINC00543-201ENST00000567234 KRTAP13-3Q3SY46 172 aa13.21□□□□□ -0.29
LINC00543-201ENST00000567234 Q5VSD8 79 aa13.2□□□□□ -0.3
LINC00543-201ENST00000567234 FAM229AH3BQW9 127 aa13.19□□□□□ -0.3
LINC00543-201ENST00000567234 DMAC1Q96GE9 116 aa13.16□□□□□ -0.3
LINC00543-201ENST00000567234 SPATA8Q6RVD6 105 aa13.12□□□□□ -0.31
LINC00543-201ENST00000567234 PKHD1L1Q86WI1 4243 aa13.09□□□□□ -0.31
LINC00543-201ENST00000567234 Q8N1X5 172 aa13.09□□□□□ -0.31
LINC00543-201ENST00000567234 KRTAP16-1A8MUX0 517 aa13.08□□□□□ -0.32
LINC00543-201ENST00000567234 Q5W150 140 aa13.03□□□□□ -0.32
LINC00543-201ENST00000567234 A0A1B0GU69 56 aa13.02□□□□□ -0.32
LINC00543-201ENST00000567234 BIRC6Q9NR09 4857 aa13□□□□□ -0.33
LINC00543-201ENST00000567234 KRTAP4-5Q9BYR2 181 aa12.98□□□□□ -0.33
LINC00543-201ENST00000567234 UQCR11O14957 56 aa12.96□□□□□ -0.33
LINC00543-201ENST00000567234 LINC01554Q52M75 96 aa12.95□□□□□ -0.34
LINC00543-201ENST00000567234 FLG2Q5D862 2391 aaPredicted RBP12.94□□□□□ -0.34
LINC00543-201ENST00000567234 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
LINC00543-201ENST00000567234 MIR22HGQ0VDD5 57 aa12.9□□□□□ -0.34
LINC00543-201ENST00000567234 IGKV2-30P06310 120 aa12.88□□□□□ -0.35
LINC00543-201ENST00000567234 KRTAP10-8P60410 259 aa12.86□□□□□ -0.35
LINC00543-201ENST00000567234 PRAC1Q96KF2 57 aa12.83□□□□□ -0.35
LINC00543-201ENST00000567234 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.35
LINC00543-201ENST00000567234 MYCBP2O75592 4640 aa12.82□□□□□ -0.36
LINC00543-201ENST00000567234 HERC2O95714 4834 aa12.81□□□□□ -0.36
LINC00543-201ENST00000567234 FAT3Q8TDW7 4589 aa12.8□□□□□ -0.36
LINC00543-201ENST00000567234 TNXBP22105 4242 aa12.76□□□□□ -0.37
LINC00543-201ENST00000567234 C20orf166-AS1Q96NR2 134 aa12.73□□□□□ -0.37
LINC00543-201ENST00000567234 ABCA13Q86UQ4 5058 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms