RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 LY6G6CO95867 125 aa3.82□□□□□ -1.8
PTPN9-204ENST00000564970 C15orf56Q8N910 161 aa3.82□□□□□ -1.8
PTPN9-204ENST00000564970 MRPL34Q9BQ48 92 aaKnown RBP3.82□□□□□ -1.8
PTPN9-204ENST00000564970 C8orf17Q9NRJ1 99 aa3.82□□□□□ -1.8
PTPN9-204ENST00000564970 SVEP1Q4LDE5 3571 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 FAM168BA1KXE4 195 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 DNAH10OSP0CZ25 163 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 KRTAP10-9P60411 292 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 LY6EQ16553 131 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 CASC10Q5T4H9 136 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 BRD3OSQ6XYD6 125 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 CCL19Q99731 98 aa3.81□□□□□ -1.8
PTPN9-204ENST00000564970 MGAM2Q2M2H8 2515 aa3.8□□□□□ -1.8
PTPN9-204ENST00000564970 ANK3Q12955 4377 aaKnown RBP3.8□□□□□ -1.8
PTPN9-204ENST00000564970 DEFB113Q30KQ7 82 aa3.8□□□□□ -1.8
PTPN9-204ENST00000564970 PRKDCP78527 4128 aaKnown RBP3.8□□□□□ -1.8
PTPN9-204ENST00000564970 RYR1P21817 5038 aa3.78□□□□□ -1.8
PTPN9-204ENST00000564970 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
PTPN9-204ENST00000564970 GIG44P09565 113 aaPredicted RBP3.77□□□□□ -1.81
PTPN9-204ENST00000564970 SLURP1P55000 103 aa3.77□□□□□ -1.81
PTPN9-204ENST00000564970 ROS1P08922 2347 aa3.77□□□□□ -1.81
PTPN9-204ENST00000564970 H3BNG1 76 aa3.76□□□□□ -1.81
PTPN9-204ENST00000564970 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
PTPN9-204ENST00000564970 LINC00304Q8N9R0 145 aa3.76□□□□□ -1.81
PTPN9-204ENST00000564970 SMR3AQ99954 134 aa3.75□□□□□ -1.81
PTPN9-204ENST00000564970 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 FAM229AH3BQW9 127 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 DEFB130BP0DP73 79 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 DEFB130AP0DP74 79 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 KRTAP13-3Q3SY46 172 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 KRTAP11-1Q8IUC1 163 aa3.74□□□□□ -1.81
PTPN9-204ENST00000564970 A0A087WTM6 91 aa3.73□□□□□ -1.81
PTPN9-204ENST00000564970 KRTAP15-1Q3LI76 137 aa3.73□□□□□ -1.81
PTPN9-204ENST00000564970 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
PTPN9-204ENST00000564970 ZANQ9Y493 2812 aa3.72□□□□□ -1.81
PTPN9-204ENST00000564970 HERC2O95714 4834 aa3.71□□□□□ -1.82
PTPN9-204ENST00000564970 PANO1I0J062 215 aa3.71□□□□□ -1.82
PTPN9-204ENST00000564970 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
PTPN9-204ENST00000564970 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.71□□□□□ -1.821e-16■■■■■ 62
PTPN9-204ENST00000564970 RYR2Q92736 4967 aa3.7□□□□□ -1.82
PTPN9-204ENST00000564970 TRRAPQ9Y4A5 3859 aa3.7□□□□□ -1.82
PTPN9-204ENST00000564970 DEFB136Q30KP8 78 aa3.7□□□□□ -1.82
PTPN9-204ENST00000564970 TENM1Q9UKZ4 2725 aa3.7□□□□□ -1.82
PTPN9-204ENST00000564970 AKAP6Q13023 2319 aa3.7□□□□□ -1.82
PTPN9-204ENST00000564970 Q6YL49 198 aa3.69□□□□□ -1.82
PTPN9-204ENST00000564970 Q96NJ1 140 aa3.69□□□□□ -1.82
PTPN9-204ENST00000564970 UBR4Q5T4S7 5183 aa3.68□□□□□ -1.82
PTPN9-204ENST00000564970 IGKV2-30P06310 120 aa3.68□□□□□ -1.82
PTPN9-204ENST00000564970 C10orf99Q6UWK7 81 aa3.68□□□□□ -1.82
PTPN9-204ENST00000564970 SONP18583 2426 aaKnown RBP3.68□□□□□ -1.82
PTPN9-204ENST00000564970 LINC01556Q5JQF7 62 aa3.67□□□□□ -1.82
PTPN9-204ENST00000564970 SSBP3-AS1Q7Z2R9 100 aa3.67□□□□□ -1.82
PTPN9-204ENST00000564970 HIVEP2P31629 2446 aa3.66□□□□□ -1.82
PTPN9-204ENST00000564970 SPART-AS1P0CW21 52 aa3.66□□□□□ -1.82
PTPN9-204ENST00000564970 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
PTPN9-204ENST00000564970 A0A096LPF7 62 aa3.65□□□□□ -1.83
PTPN9-204ENST00000564970 A0A1B0GU33 70 aa3.64□□□□□ -1.83
PTPN9-204ENST00000564970 H0YAA0 97 aa3.63□□□□□ -1.83
PTPN9-204ENST00000564970 PSORS1C2Q9UIG4 136 aa3.63□□□□□ -1.83
PTPN9-204ENST00000564970 DYNC2H1Q8NCM8 4307 aaKnown RBP3.63□□□□□ -1.83
PTPN9-204ENST00000564970 VWFP04275 2813 aa3.63□□□□□ -1.83
PTPN9-204ENST00000564970 A0A0G2JQZ4 141 aa3.62□□□□□ -1.83
PTPN9-204ENST00000564970 KRTAP24-1Q3LI83 254 aa3.62□□□□□ -1.83
PTPN9-204ENST00000564970 DNAH1Q9P2D7 4330 aa3.62□□□□□ -1.83
PTPN9-204ENST00000564970 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
PTPN9-204ENST00000564970 NBDYA0A0U1RRE5 68 aa3.61□□□□□ -1.83
PTPN9-204ENST00000564970 H1FX-AS1Q4G0G2 97 aa3.61□□□□□ -1.83
PTPN9-204ENST00000564970 Q6ZSA8 131 aa3.61□□□□□ -1.83
PTPN9-204ENST00000564970 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
PTPN9-204ENST00000564970 TENM3Q9P273 2699 aa3.61□□□□□ -1.83
PTPN9-204ENST00000564970 ALMS1Q8TCU4 4167 aa3.59□□□□□ -1.83
PTPN9-204ENST00000564970 CRIPTQ9P021 101 aa3.59□□□□□ -1.83
PTPN9-204ENST00000564970 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
PTPN9-204ENST00000564970 KRTAP7-1Q8IUC3 87 aa3.58□□□□□ -1.84
PTPN9-204ENST00000564970 CIRBP-AS1Q8TBR5 109 aa3.58□□□□□ -1.84
PTPN9-204ENST00000564970 PRLHP81277 87 aa3.57□□□□□ -1.84
PTPN9-204ENST00000564970 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
PTPN9-204ENST00000564970 A0A1W2PPR1 153 aa3.55□□□□□ -1.84
PTPN9-204ENST00000564970 J3QL48 77 aa3.55□□□□□ -1.84
PTPN9-204ENST00000564970 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
PTPN9-204ENST00000564970 KRTAP1-1Q07627 177 aa3.55□□□□□ -1.84
PTPN9-204ENST00000564970 C14orf177Q52M58 125 aa3.55□□□□□ -1.84
PTPN9-204ENST00000564970 NOTCH3Q9UM47 2321 aa3.53□□□□□ -1.84
PTPN9-204ENST00000564970 KRTAP13-1Q8IUC0 172 aa3.53□□□□□ -1.84
PTPN9-204ENST00000564970 K7EIL1 84 aa3.52□□□□□ -1.85
PTPN9-204ENST00000564970 COL7A1Q02388 2944 aa3.5□□□□□ -1.85
PTPN9-204ENST00000564970 TPRXLQ17RH7 258 aa3.5□□□□□ -1.85
PTPN9-204ENST00000564970 LCE5AQ5TCM9 118 aa3.5□□□□□ -1.85
PTPN9-204ENST00000564970 HTN3P15516 51 aa3.49□□□□□ -1.85
PTPN9-204ENST00000564970 HERC1Q15751 4861 aa3.49□□□□□ -1.85
PTPN9-204ENST00000564970 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
PTPN9-204ENST00000564970 DEFB135Q30KP9 77 aa3.47□□□□□ -1.85
PTPN9-204ENST00000564970 WWC2-AS2Q96NR7 200 aa3.47□□□□□ -1.85
PTPN9-204ENST00000564970 TENM2Q9NT68 2774 aa3.46□□□□□ -1.85
PTPN9-204ENST00000564970 KIAA1109Q2LD37 5005 aa3.46□□□□□ -1.86
PTPN9-204ENST00000564970 A0A096LNI7 61 aa3.45□□□□□ -1.86
PTPN9-204ENST00000564970 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
PTPN9-204ENST00000564970 DNAH9Q9NYC9 4486 aa3.42□□□□□ -1.86
PTPN9-204ENST00000564970 SPINK1P00995 79 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 387.9 ms