RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TOGARAM1Q9Y4F4 1720 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 SPTBN4Q9H254 2564 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 C9orf92A6NGG3 77 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 CREBBPQ92793 2442 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 CDC42BPAQ5VT25 1732 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 STAB2Q8WWQ8 2551 aa-0.04□□□□□ -2.42
UBR1-205ENST00000564540 HIVEP1P15822 2718 aa-0.05□□□□□ -2.42
UBR1-205ENST00000564540 MUC12Q9UKN1 5478 aa-0.05□□□□□ -2.42
UBR1-205ENST00000564540 SETD2Q9BYW2 2564 aaPredicted RBP-0.05□□□□□ -2.42
UBR1-205ENST00000564540 TGP01266 2768 aa-0.06□□□□□ -2.42
UBR1-205ENST00000564540 SRRM2Q9UQ35 2752 aaKnown RBP-0.06□□□□□ -2.42
UBR1-205ENST00000564540 LINC00308Q8TCZ7 52 aa-0.06□□□□□ -2.42
UBR1-205ENST00000564540 NBEAL1Q6ZS30 2694 aa-0.06□□□□□ -2.42
UBR1-205ENST00000564540 PREX2Q70Z35 1606 aa-0.06□□□□□ -2.42
UBR1-205ENST00000564540 PCLOQ9Y6V0 5065 aa-0.06□□□□□ -2.42
UBR1-205ENST00000564540 SONP18583 2426 aaKnown RBP-0.06□□□□□ -2.42
UBR1-205ENST00000564540 ITPR3Q14573 2671 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 CUBNO60494 3623 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 DMXL1Q9Y485 3027 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 H3BUA1 57 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 SPRR2EP22531 72 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 TMEM167BQ9NRX6 74 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.07□□□□□ -2.42
UBR1-205ENST00000564540 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
UBR1-205ENST00000564540 AGLP35573 1532 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 PKD1L2Q7Z442 2459 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 IGLV5-48A0A075B6I7 105 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 KRTAP6-1Q3LI64 71 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 ZZEF1O43149 2961 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 CEP290O15078 2479 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 MROH2AA6NES4 1674 aa-0.08□□□□□ -2.42
UBR1-205ENST00000564540 HERC1Q15751 4861 aa-0.09□□□□□ -2.42
UBR1-205ENST00000564540 DSTQ03001 7570 aaKnown RBP-0.09□□□□□ -2.42
UBR1-205ENST00000564540 HERC2O95714 4834 aa-0.09□□□□□ -2.42
UBR1-205ENST00000564540 H0YGX0 51 aa-0.09□□□□□ -2.42
UBR1-205ENST00000564540 KMT2CQ8NEZ4 4911 aaKnown RBP-0.09□□□□□ -2.42
UBR1-205ENST00000564540 HTTP42858 3142 aa-0.09□□□□□ -2.42
UBR1-205ENST00000564540 SACSQ9NZJ4 4579 aa-0.09□□□□□ -2.42
UBR1-205ENST00000564540 MT1AP04731 61 aa-0.1□□□□□ -2.43
UBR1-205ENST00000564540 TEX15Q9BXT5 2789 aa-0.1□□□□□ -2.43
UBR1-205ENST00000564540 EPPK1P58107 5090 aaKnown RBP-0.1□□□□□ -2.43
UBR1-205ENST00000564540 USP9YO00507 2555 aaPredicted RBP-0.1□□□□□ -2.43
UBR1-205ENST00000564540 LAMA5O15230 3695 aa-0.1□□□□□ -2.43
UBR1-205ENST00000564540 GCN1Q92616 2671 aaKnown RBP-0.1□□□□□ -2.43
UBR1-205ENST00000564540 PKHD1L1Q86WI1 4243 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 MXRA5Q9NR99 2828 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 SYCP2Q9BX26 1530 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 DNAH9Q9NYC9 4486 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 USH2AO75445 5202 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 AKAP9Q99996 3911 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
UBR1-205ENST00000564540 DOPEY1Q5JWR5 2465 aa-0.12□□□□□ -2.43
UBR1-205ENST00000564540 NBPF19A0A087WUL8 3843 aa-0.12□□□□□ -2.43
UBR1-205ENST00000564540 TEP1Q99973 2627 aaKnown RBP-0.12□□□□□ -2.43
UBR1-205ENST00000564540 TACC2O95359 2948 aa-0.12□□□□□ -2.43
UBR1-205ENST00000564540 EFCAB6Q5THR3 1501 aa-0.13□□□□□ -2.43
UBR1-205ENST00000564540 FAT3Q8TDW7 4589 aa-0.13□□□□□ -2.43
UBR1-205ENST00000564540 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.13□□□□□ -2.43
UBR1-205ENST00000564540 DNAH3Q8TD57 4116 aa-0.13□□□□□ -2.43
UBR1-205ENST00000564540 ADCY10Q96PN6 1610 aa-0.13□□□□□ -2.43
UBR1-205ENST00000564540 STARD9Q9P2P6 4700 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 ANKRD11Q6UB99 2663 aaPredicted RBP-0.14□□□□□ -2.43
UBR1-205ENST00000564540 MYO18BQ8IUG5 2567 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 ANK3Q12955 4377 aaKnown RBP-0.14□□□□□ -2.43
UBR1-205ENST00000564540 SPRR2FQ96RM1 72 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 NOP10Q9NPE3 64 aaKnown RBP-0.14□□□□□ -2.43
UBR1-205ENST00000564540 KAAG1Q9UBP8 84 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 HYDINQ4G0P3 5121 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 WDR87Q6ZQQ6 2873 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 UTP20O75691 2785 aaKnown RBP-0.14□□□□□ -2.43
UBR1-205ENST00000564540 UBR4Q5T4S7 5183 aa-0.14□□□□□ -2.43
UBR1-205ENST00000564540 BIRC6Q9NR09 4857 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 FANCD2Q9BXW9 1451 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 SPG11Q96JI7 2443 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 PLNP26678 52 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 KRTAP19-7Q3SYF9 63 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 ABRACLQ9P1F3 81 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 FASNP49327 2511 aaKnown RBP-0.15□□□□□ -2.43
UBR1-205ENST00000564540 NIPBLQ6KC79 2804 aaeCLIP-0.15□□□□□ -2.43
UBR1-205ENST00000564540 USP9XQ93008 2570 aaPredicted RBP-0.15□□□□□ -2.43
UBR1-205ENST00000564540 KALRNO60229 2985 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 RYR1P21817 5038 aa-0.15□□□□□ -2.43
UBR1-205ENST00000564540 FRYQ5TBA9 3013 aa-0.16□□□□□ -2.43
UBR1-205ENST00000564540 APOBP04114 4563 aaKnown RBP-0.16□□□□□ -2.43
UBR1-205ENST00000564540 SMIM27A0A1W2PRY6 76 aa-0.16□□□□□ -2.44
UBR1-205ENST00000564540 DEFB110Q30KQ9 67 aa-0.16□□□□□ -2.44
UBR1-205ENST00000564540 LAMA2P24043 3122 aaKnown RBP-0.16□□□□□ -2.44
UBR1-205ENST00000564540 KIAA1109Q2LD37 5005 aa-0.16□□□□□ -2.44
UBR1-205ENST00000564540 A0A1B0GUL6 1792 aa-0.17□□□□□ -2.44
UBR1-205ENST00000564540 MTORP42345 2549 aa-0.17□□□□□ -2.44
UBR1-205ENST00000564540 RYR3Q15413 4870 aa-0.17□□□□□ -2.44
UBR1-205ENST00000564540 MMP24-AS1A0A0U1RRL7 71 aa-0.17□□□□□ -2.44
UBR1-205ENST00000564540 CMC2Q9NRP2 79 aa-0.17□□□□□ -2.44
UBR1-205ENST00000564540 RELNP78509 3460 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 LAMA1P25391 3075 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 CEP295Q9C0D2 2601 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 WFDC10BQ8IUB3 73 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 DNAH6Q9C0G6 4158 aa-0.18□□□□□ -2.44
UBR1-205ENST00000564540 LMO7Q8WWI1 1683 aa-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms