RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
SNRPA1-211ENST00000560433 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
SNRPA1-211ENST00000560433 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 MMP24-AS1A0A0U1RRL7 71 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 C1orf195Q5TG92 126 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 LINC00304Q8N9R0 145 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 TNXBP22105 4242 aa6.22□□□□□ -1.41
SNRPA1-211ENST00000560433 TRAV7A0A075B6U4 112 aa6.21□□□□□ -1.41
SNRPA1-211ENST00000560433 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
SNRPA1-211ENST00000560433 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
SNRPA1-211ENST00000560433 SNURFQ9Y675 71 aa6.21□□□□□ -1.42
SNRPA1-211ENST00000560433 hDV103S1A0JD37 113 aa6.19□□□□□ -1.42
SNRPA1-211ENST00000560433 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
SNRPA1-211ENST00000560433 SPINK1P00995 79 aa6.18□□□□□ -1.42
SNRPA1-211ENST00000560433 V9GYY9 64 aa6.18□□□□□ -1.42
SNRPA1-211ENST00000560433 FAT3Q8TDW7 4589 aa6.18□□□□□ -1.42
SNRPA1-211ENST00000560433 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
SNRPA1-211ENST00000560433 LIMD2Q9BT23 127 aa6.17□□□□□ -1.42
SNRPA1-211ENST00000560433 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
SNRPA1-211ENST00000560433 SMIM20Q8N5G0 67 aa6.16□□□□□ -1.42
SNRPA1-211ENST00000560433 J3QL48 77 aa6.16□□□□□ -1.42
SNRPA1-211ENST00000560433 NDUFS5O43920 106 aa6.16□□□□□ -1.42
SNRPA1-211ENST00000560433 Q5XG85 94 aa6.15□□□□□ -1.43
SNRPA1-211ENST00000560433 Q8N1X5 172 aa6.15□□□□□ -1.43
SNRPA1-211ENST00000560433 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
SNRPA1-211ENST00000560433 TMEM254Q8TBM7 123 aa6.14□□□□□ -1.43
SNRPA1-211ENST00000560433 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
SNRPA1-211ENST00000560433 LINC00313P59037 77 aa6.11□□□□□ -1.43
SNRPA1-211ENST00000560433 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-211ENST00000560433 SPAG11AQ6PDA7 123 aa6.11□□□□□ -1.43
SNRPA1-211ENST00000560433 A0A0U1RQV1 116 aa6.08□□□□□ -1.44
SNRPA1-211ENST00000560433 H3BS24 57 aa6.08□□□□□ -1.44
SNRPA1-211ENST00000560433 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
SNRPA1-211ENST00000560433 KLKP1Q107X0 134 aa6.08□□□□□ -1.44
SNRPA1-211ENST00000560433 C9orf92A6NGG3 77 aa6.08□□□□□ -1.44
SNRPA1-211ENST00000560433 LINC00208Q96KT6 92 aa6.07□□□□□ -1.44
SNRPA1-211ENST00000560433 H0Y9P7 68 aa6.07□□□□□ -1.44
SNRPA1-211ENST00000560433 H7BZZ5 65 aa6.07□□□□□ -1.44
SNRPA1-211ENST00000560433 ABCA13Q86UQ4 5058 aa6.07□□□□□ -1.44
SNRPA1-211ENST00000560433 A0A0A0MQY5 61 aa6.06□□□□□ -1.44
SNRPA1-211ENST00000560433 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
SNRPA1-211ENST00000560433 HERC2O95714 4834 aa6.05□□□□□ -1.44
SNRPA1-211ENST00000560433 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
SNRPA1-211ENST00000560433 Q5W150 140 aa6.05□□□□□ -1.44
SNRPA1-211ENST00000560433 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
SNRPA1-211ENST00000560433 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
SNRPA1-211ENST00000560433 MP68P56378 58 aa6.04□□□□□ -1.44
SNRPA1-211ENST00000560433 OXTP01178 125 aa6.03□□□□□ -1.44
SNRPA1-211ENST00000560433 MT1HL1P0DM35 61 aa6.03□□□□□ -1.44
SNRPA1-211ENST00000560433 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
SNRPA1-211ENST00000560433 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
SNRPA1-211ENST00000560433 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
SNRPA1-211ENST00000560433 PRR4Q16378 134 aa6□□□□□ -1.45
SNRPA1-211ENST00000560433 Q8N9P0 234 aaPredicted RBP5.99□□□□□ -1.45
SNRPA1-211ENST00000560433 TMEM258P61165 79 aa5.99□□□□□ -1.45
SNRPA1-211ENST00000560433 PCOTHQ58A44 107 aa5.99□□□□□ -1.45
SNRPA1-211ENST00000560433 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
SNRPA1-211ENST00000560433 FAM236DA0A1B0GTK5 79 aa5.96□□□□□ -1.45
SNRPA1-211ENST00000560433 FAM236CP0DP71 79 aa5.96□□□□□ -1.45
SNRPA1-211ENST00000560433 NDUFC1O43677 76 aa5.95□□□□□ -1.46
SNRPA1-211ENST00000560433 KRTAP13-3Q3SY46 172 aa5.95□□□□□ -1.46
SNRPA1-211ENST00000560433 LPAP08519 4548 aa5.95□□□□□ -1.46
SNRPA1-211ENST00000560433 H3BPC8 53 aa5.91□□□□□ -1.46
SNRPA1-211ENST00000560433 IGLV7-46A0A075B6I9 117 aa5.9□□□□□ -1.47
SNRPA1-211ENST00000560433 IGKV2D-30A0A075B6S6 120 aa5.9□□□□□ -1.47
SNRPA1-211ENST00000560433 IGKV2-30P06310 120 aa5.9□□□□□ -1.47
SNRPA1-211ENST00000560433 PRO0628Q9UI54 55 aa5.89□□□□□ -1.47
SNRPA1-211ENST00000560433 CYP4F30PQ9H0H9 118 aa5.88□□□□□ -1.47
SNRPA1-211ENST00000560433 LRP2P98164 4655 aa5.87□□□□□ -1.47
SNRPA1-211ENST00000560433 C20orf166-AS1Q96NR2 134 aa5.87□□□□□ -1.47
SNRPA1-211ENST00000560433 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
SNRPA1-211ENST00000560433 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
SNRPA1-211ENST00000560433 A8MUU9 505 aa5.86□□□□□ -1.47
SNRPA1-211ENST00000560433 FP248Q71RG6 208 aaPredicted RBP5.84□□□□□ -1.48
SNRPA1-211ENST00000560433 HRES1P13985 223 aa5.82□□□□□ -1.48
SNRPA1-211ENST00000560433 XP32Q5T750 250 aa5.82□□□□□ -1.48
SNRPA1-211ENST00000560433 ATP5EP56381 51 aaPredicted RBP5.8□□□□□ -1.48
SNRPA1-211ENST00000560433 SERP1Q9Y6X1 66 aa5.8□□□□□ -1.48
SNRPA1-211ENST00000560433 Q75L30 129 aa5.79□□□□□ -1.48
SNRPA1-211ENST00000560433 SPANXA2-OT1Q8N9U9 137 aa5.79□□□□□ -1.48
SNRPA1-211ENST00000560433 HERC1Q15751 4861 aa5.79□□□□□ -1.48
SNRPA1-211ENST00000560433 RPS28P62857 69 aaKnown RBP5.78□□□□□ -1.48
SNRPA1-211ENST00000560433 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
SNRPA1-211ENST00000560433 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
SNRPA1-211ENST00000560433 SPINK7P58062 85 aa5.75□□□□□ -1.49
SNRPA1-211ENST00000560433 RPL37P61927 97 aaKnown RBP5.75□□□□□ -1.49
SNRPA1-211ENST00000560433 COA5Q86WW8 74 aa5.73□□□□□ -1.49
SNRPA1-211ENST00000560433 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
SNRPA1-211ENST00000560433 MPLKIPQ8TAP9 179 aa5.71□□□□□ -1.5
SNRPA1-211ENST00000560433 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
SNRPA1-211ENST00000560433 MUC2Q02817 5179 aa5.67□□□□□ -1.5
SNRPA1-211ENST00000560433 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
SNRPA1-211ENST00000560433 ACYP2P14621 99 aa5.66□□□□□ -1.5
SNRPA1-211ENST00000560433 PMAIP1Q13794 54 aa5.66□□□□□ -1.5
SNRPA1-211ENST00000560433 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.51
SNRPA1-211ENST00000560433 CHKB-CPT1BH3BT56 60 aa5.62□□□□□ -1.51
SNRPA1-211ENST00000560433 HMCN2Q8NDA2 5059 aa5.6□□□□□ -1.51
SNRPA1-211ENST00000560433 PSPHP1O15172 72 aa5.58□□□□□ -1.52
SNRPA1-211ENST00000560433 COX6B2Q6YFQ2 88 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms