RNA–Protein interactions for RNA: ENST00000558543.5

PDE8A-209, Transcript of phosphodiesterase 8A, humanhuman

TSL 3

Gene PDE8A, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-209ENST00000558543 TTC28Q96AY4 2481 aa1.47□□□□□ -2.17
PDE8A-209ENST00000558543 SPART-AS1P0CW21 52 aa1.46□□□□□ -2.18
PDE8A-209ENST00000558543 EP300Q09472 2414 aaPredicted RBP1.46□□□□□ -2.18
PDE8A-209ENST00000558543 SETD2Q9BYW2 2564 aaPredicted RBP1.46□□□□□ -2.18
PDE8A-209ENST00000558543 FAM186AA6NE01 2351 aa1.45□□□□□ -2.18
PDE8A-209ENST00000558543 ANKHD1Q8IWZ3 2542 aaKnown RBP1.45□□□□□ -2.18
PDE8A-209ENST00000558543 MAP1AP78559 2803 aaPredicted RBP1.45□□□□□ -2.18
PDE8A-209ENST00000558543 RIF1Q5UIP0 2472 aaKnown RBP1.45□□□□□ -2.18
PDE8A-209ENST00000558543 BDP1A6H8Y1 2624 aa1.45□□□□□ -2.18
PDE8A-209ENST00000558543 CEP350Q5VT06 3117 aa1.44□□□□□ -2.18
PDE8A-209ENST00000558543 ITPR1Q14643 2758 aa1.44□□□□□ -2.18
PDE8A-209ENST00000558543 AKAP13Q12802 2813 aa1.44□□□□□ -2.18
PDE8A-209ENST00000558543 NBEAQ8NFP9 2946 aa1.43□□□□□ -2.18
PDE8A-209ENST00000558543 MEGF8Q7Z7M0 2845 aa1.43□□□□□ -2.18
PDE8A-209ENST00000558543 COL6A3P12111 3177 aa1.43□□□□□ -2.18
PDE8A-209ENST00000558543 TNP1P09430 55 aa1.42□□□□□ -2.18
PDE8A-209ENST00000558543 EPG5Q9HCE0 2579 aa1.41□□□□□ -2.18
PDE8A-209ENST00000558543 SPG11Q96JI7 2443 aa1.41□□□□□ -2.18
PDE8A-209ENST00000558543 PRUNE2Q8WUY3 3088 aa1.41□□□□□ -2.18
PDE8A-209ENST00000558543 NCOR2Q9Y618 2525 aa1.4□□□□□ -2.18
PDE8A-209ENST00000558543 LRRK2Q5S007 2527 aa1.4□□□□□ -2.19
PDE8A-209ENST00000558543 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
PDE8A-209ENST00000558543 SONP18583 2426 aaKnown RBP1.39□□□□□ -2.19
PDE8A-209ENST00000558543 CELSR1Q9NYQ6 3014 aa1.39□□□□□ -2.19
PDE8A-209ENST00000558543 ATRQ13535 2644 aa1.39□□□□□ -2.19
PDE8A-209ENST00000558543 FRYLO94915 3013 aa1.39□□□□□ -2.19
PDE8A-209ENST00000558543 USP9YO00507 2555 aaPredicted RBP1.39□□□□□ -2.19
PDE8A-209ENST00000558543 HELZ2Q9BYK8 2649 aaKnown RBP1.38□□□□□ -2.19
PDE8A-209ENST00000558543 POLQO75417 2590 aa1.38□□□□□ -2.19
PDE8A-209ENST00000558543 LRBAP50851 2863 aa1.37□□□□□ -2.19
PDE8A-209ENST00000558543 CHD9Q3L8U1 2897 aa1.37□□□□□ -2.19
PDE8A-209ENST00000558543 HTN3P15516 51 aa1.37□□□□□ -2.19
PDE8A-209ENST00000558543 DEFB135Q30KP9 77 aa1.37□□□□□ -2.19
PDE8A-209ENST00000558543 ITPR3Q14573 2671 aa1.36□□□□□ -2.19
PDE8A-209ENST00000558543 HIVEP3Q5T1R4 2406 aa1.36□□□□□ -2.19
PDE8A-209ENST00000558543 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
PDE8A-209ENST00000558543 KRTAP10-4P60372 401 aaPredicted RBP1.36□□□□□ -2.19
PDE8A-209ENST00000558543 PTPN13Q12923 2485 aa1.36□□□□□ -2.19
PDE8A-209ENST00000558543 NF1P21359 2839 aa1.35□□□□□ -2.19
PDE8A-209ENST00000558543 ZZEF1O43149 2961 aa1.35□□□□□ -2.19
PDE8A-209ENST00000558543 RPS29P62273 56 aaKnown RBP1.34□□□□□ -2.19
PDE8A-209ENST00000558543 CFAP54Q96N23 3096 aa1.34□□□□□ -2.2
PDE8A-209ENST00000558543 CFAP46Q8IYW2 2715 aa1.34□□□□□ -2.2
PDE8A-209ENST00000558543 PIEZO1Q92508 2521 aa1.34□□□□□ -2.2
PDE8A-209ENST00000558543 UTP20O75691 2785 aaKnown RBP1.33□□□□□ -2.2
PDE8A-209ENST00000558543 ACANP16112 2415 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 FLNCQ14315 2725 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 RANBP2P49792 3224 aaKnown RBP1.33□□□□□ -2.2
PDE8A-209ENST00000558543 SRCAPQ6ZRS2 3230 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 CACNA1AO00555 2505 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 FRYQ5TBA9 3013 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 TRIOO75962 3097 aa1.33□□□□□ -2.2
PDE8A-209ENST00000558543 APCP25054 2843 aa1.32□□□□□ -2.2
PDE8A-209ENST00000558543 U3KQA8 63 aa1.32□□□□□ -2.2
PDE8A-209ENST00000558543 HTTP42858 3142 aa1.31□□□□□ -2.2
PDE8A-209ENST00000558543 NIPBLQ6KC79 2804 aaeCLIP1.31□□□□□ -2.2
PDE8A-209ENST00000558543 CHD8Q9HCK8 2581 aa1.31□□□□□ -2.2
PDE8A-209ENST00000558543 DCHS2Q6V1P9 2916 aa1.3□□□□□ -2.2
PDE8A-209ENST00000558543 M0R2T5 61 aa1.3□□□□□ -2.2
PDE8A-209ENST00000558543 SETXQ7Z333 2677 aaKnown RBP1.3□□□□□ -2.2
PDE8A-209ENST00000558543 CENPEQ02224 2701 aa1.3□□□□□ -2.2
PDE8A-209ENST00000558543 VPS13AQ96RL7 3174 aa1.29□□□□□ -2.2
PDE8A-209ENST00000558543 TLN1Q9Y490 2541 aaKnown RBP1.29□□□□□ -2.2
PDE8A-209ENST00000558543 C5orf42Q9H799 3197 aa1.29□□□□□ -2.2
PDE8A-209ENST00000558543 DNAH12Q6ZR08 3092 aa1.29□□□□□ -2.2
PDE8A-209ENST00000558543 BOD1L1Q8NFC6 3051 aa1.29□□□□□ -2.2
PDE8A-209ENST00000558543 VPS13DQ5THJ4 4388 aa1.28□□□□□ -2.2
PDE8A-209ENST00000558543 TENM1Q9UKZ4 2725 aa1.28□□□□□ -2.2
PDE8A-209ENST00000558543 TENM4Q6N022 2769 aa1.28□□□□□ -2.2
PDE8A-209ENST00000558543 ATMQ13315 3056 aa1.27□□□□□ -2.21
PDE8A-209ENST00000558543 GCN1Q92616 2671 aaKnown RBP1.27□□□□□ -2.21
PDE8A-209ENST00000558543 USP9XQ93008 2570 aaPredicted RBP1.27□□□□□ -2.21
PDE8A-209ENST00000558543 MTORP42345 2549 aa1.27□□□□□ -2.21
PDE8A-209ENST00000558543 SPTAN1Q13813 2472 aaKnown RBP1.27□□□□□ -2.21
PDE8A-209ENST00000558543 DEFB4AO15263 64 aa1.27□□□□□ -2.21
PDE8A-209ENST00000558543 TGP01266 2768 aa1.27□□□□□ -2.21
PDE8A-209ENST00000558543 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 COL12A1Q99715 3063 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 PDZD2O15018 2839 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 TEX15Q9BXT5 2789 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 KALRNO60229 2985 aa1.26□□□□□ -2.21
PDE8A-209ENST00000558543 MKI67P46013 3256 aaKnown RBP1.25□□□□□ -2.21
PDE8A-209ENST00000558543 CFAP47Q6ZTR5 3102 aa1.25□□□□□ -2.21
PDE8A-209ENST00000558543 ZFHX4Q86UP3 3567 aa1.24□□□□□ -2.21
PDE8A-209ENST00000558543 ITPR2Q14571 2701 aa1.24□□□□□ -2.21
PDE8A-209ENST00000558543 MYO18BQ8IUG5 2567 aa1.24□□□□□ -2.21
PDE8A-209ENST00000558543 DOPEY1Q5JWR5 2465 aa1.24□□□□□ -2.21
PDE8A-209ENST00000558543 NBEAL1Q6ZS30 2694 aa1.23□□□□□ -2.21
PDE8A-209ENST00000558543 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
PDE8A-209ENST00000558543 DMXL2Q8TDJ6 3036 aa1.23□□□□□ -2.21
PDE8A-209ENST00000558543 ANKRD11Q6UB99 2663 aaPredicted RBP1.22□□□□□ -2.21
PDE8A-209ENST00000558543 GOLGB1Q14789 3259 aaKnown RBP1.22□□□□□ -2.21
PDE8A-209ENST00000558543 ZFYVE26Q68DK2 2539 aa1.22□□□□□ -2.21
PDE8A-209ENST00000558543 DNAH11Q96DT5 4516 aa1.22□□□□□ -2.21
PDE8A-209ENST00000558543 WDFY4Q6ZS81 3184 aa1.22□□□□□ -2.21
PDE8A-209ENST00000558543 MXRA5Q9NR99 2828 aa1.21□□□□□ -2.22
PDE8A-209ENST00000558543 TLN2Q9Y4G6 2542 aa1.21□□□□□ -2.22
PDE8A-209ENST00000558543 CELSR3Q9NYQ7 3312 aa1.21□□□□□ -2.22
PDE8A-209ENST00000558543 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms